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Merge branch 'bug/JAL-2704gapColourFading' into documentation/JAL-2675_release2102b1
[jalview.git]
/
src
/
2017-09-04
Jim Procter
Merge branch 'bug/JAL-2704gapColourFading' into documen...
tree
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commitdiff
2017-09-04
Jim Procter
Merge branch 'releases/Release_2_10_2b1_Branch' of...
tree
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commitdiff
2017-09-04
kiramt
JAL-2611 reinstated missed commit
tree
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commitdiff
2017-09-03
Jim Procter
Merge branch 'feature/JAL-2587' into documentation...
tree
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commitdiff
2017-09-03
Jim Procter
Merge branch 'bug/JAL-2691_nomultimermapping' into...
tree
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commitdiff
2017-09-03
Jim Procter
Merge branch 'bug/JAL-2665-2.10.2b' into documentation...
bug/JAL-2673_mergewithproblem
tree
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commitdiff
2017-09-03
Jim Procter
Merge branch 'feature/JAL-2527' into documentation...
tree
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commitdiff
2017-09-03
Jim Procter
Merge branch 'features/JAL-2681_duplicatecrossrefs...
tree
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commitdiff
2017-08-31
kiramt
JAL-2527 Updated Spanish, adjusted UI so Spanish fits
tree
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commitdiff
2017-08-31
kiramt
JAL-2527 Updates following code review
tree
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commitdiff
2017-08-31
gmungoc
JAL-2704 unit test for Above PID gap colour, simplified...
bug/JAL-2704gapColourFading
tree
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commitdiff
2017-08-30
gmungoc
JAL-2704 don't shade gap colour for PID/conservation
tree
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commitdiff
2017-08-30
kiramt
JAL-2527 Code comments, tidy
tree
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commitdiff
2017-08-30
kiramt
JAL-2527 Added default setting/resetting and first...
tree
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commitdiff
2017-08-30
kiramt
JAL-2527 Wired up cached values to overview
tree
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commitdiff
2017-08-30
kiramt
Merge remote-tracking branch 'origin/feature/2588'...
tree
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commitdiff
2017-08-30
kiramt
Merge branch 'feature/JAL-2664' into feature/JAL-2527
tree
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commitdiff
2017-08-29
kiramt
JAL-2664 Updates following review
feature/JAL-2664
tree
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commitdiff
2017-08-29
kiramt
JAL-2527 Added overview prefs - don't get picked up...
tree
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commitdiff
2017-08-29
kiramt
JAL-2665 OOM checks just in case
bug/JAL-2665-2.10.2b
tree
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commitdiff
2017-08-29
kiramt
JAL-2665 Corrected to draw selections for wrapped printing
tree
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commitdiff
2017-08-28
kiramt
JAL-2527 Started adding overview preferences
tree
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commitdiff
2017-08-28
kiramt
Merge remote-tracking branch 'origin/releases/Release_2...
tree
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commitdiff
2017-08-28
kiramt
JAL-2665 Changes for review comments; printing with...
bug/JAL-2665
tree
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commitdiff
2017-08-27
Jim Procter
JAL-2691 catchall if passed dataset sequences (tests...
tree
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commitdiff
2017-08-27
Jim Procter
JAL-2693 TODO comments
tree
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commitdiff
2017-08-27
Jim Procter
JAL-2691 discover any existing chain mappings for a...
tree
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commitdiff
2017-08-27
Jim Procter
JAL-2691 cached view combo box value javadoc
tree
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commitdiff
2017-08-25
kiramt
JAL-2587 Removed annoying double repaint on hide insertions
tree
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commitdiff
2017-08-25
kiramt
JAL-2587 Update overview progress bar while drawing...
tree
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commitdiff
2017-08-25
kiramt
JAL-2587 Progress bar sizing tweaks
tree
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commitdiff
2017-08-25
kiramt
JAL-2587 Made progress bar display before overview...
tree
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commitdiff
2017-08-23
gmungoc
JAL-2435 last lost commit e926a5d redone
tree
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commitdiff
2017-08-22
Jim Procter
JAL-1551 formatting
tree
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commitdiff
2017-08-22
Jim Procter
JAL-2681 canonicalise DB source before fetching to...
tree
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commitdiff
2017-08-22
Jim Procter
JAL-2681 formatting
tree
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commitdiff
2017-08-21
Jim Procter
JAL-2588 don’t test char==gap until we know the shader...
feature/2588
tree
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commitdiff
2017-08-21
Jim Procter
JAL-2588 field on overview colour finder for default...
tree
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commitdiff
2017-08-18
Jim Procter
Merge branch 'feature/2588' into merge/develop_feature...
tree
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commitdiff
2017-08-18
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-08-18
kiramt
JAL-2664 Adjusted colour of hidden cols/seqs
tree
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commitdiff
2017-08-18
kiramt
JAL-2664 Correct colouring for rows
tree
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commitdiff
2017-08-18
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-08-18
kiramt
JAL-2665 Comments
tree
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commitdiff
2017-08-18
kiramt
JAL-2665 Refactoring (and side-effect fix for JAL-2672)
tree
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commitdiff
2017-08-18
kiramt
JAL-2665 tidies
tree
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commitdiff
2017-08-17
kiramt
JAL-2665 Code tidies
tree
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commitdiff
2017-08-17
kiramt
JAL-2665 Fixed wrapped mode group over >1 panel; and...
tree
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commitdiff
2017-08-17
kiramt
JAL-2665 partial fix for selection running over 2 wrapp...
tree
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commitdiff
2017-08-17
kiramt
JAL-2665 Correct position of selection switching from...
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 add GPL to main sources
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Working with hidden columns
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Added hidden columns group selection - almost...
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Selecting on wrapped alignments
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 start to account for wrapped alignments
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Tidy
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 fix resize
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 Code tidy
tree
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commitdiff
2017-08-16
kiramt
JAL-2556 Resolved group update on colouring and escape
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Added sequence group update event.
tree
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commitdiff
2017-08-16
kiramt
JAL-2665 Draw selection group - works on scroll but...
tree
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commitdiff
2017-08-15
kiramt
JAL-2265 turn off NPE
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 choose appropriate alphabet for filtering...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 source formatting
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 filterNonStandardResidues configurable for...
tree
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commitdiff
2017-08-14
Jim Procter
Merge branch 'patch/JAL-2663_filterAACons' into develop
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2663 flag and filter to exclude non-standard amino...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2663 source formatting
tree
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commitdiff
2017-08-14
kiramt
JAL-2664 Initial change to drawing hidden regions in...
tree
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commitdiff
2017-08-10
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-08-10
kiramt
JAL-2587 tidy
tree
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commitdiff
2017-08-10
gmungoc
JAL-2660 used saved value of ignoreGapsInConsensus...
tree
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commitdiff
2017-08-10
kiramt
JAL-2587 Tinkering with progress panel appearance
tree
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commitdiff
2017-08-10
kiramt
JAL-2587 prevented double overview recalc on opening...
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2426 Rfam download suffix
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2426 JAL-1270 report Xfam download URL used if...
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2425 raw stockholm download URLs
tree
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commitdiff
2017-08-09
Jim Procter
JAL-2425 remove overloaded getSequenceRecords method...
tree
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commitdiff
2017-08-09
kiramt
JAL-2587 Adjusting height for progress bar
tree
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commitdiff
2017-08-09
kiramt
JAL-2587 fiddling with dimensions
tree
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commitdiff
2017-08-09
kiramt
JAL-2587 Keep progress bar panel in position regardless...
tree
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commitdiff
2017-08-09
Jim Procter
Merge branch 'bug/JAL-2634' into develop
tree
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commitdiff
2017-08-09
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
tree
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commitdiff
2017-08-08
gmungoc
JAL-2560 alternative fix (reinstate lost line of code)
tree
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commitdiff
2017-08-08
kiramt
JAL-2587 tidies
tree
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commitdiff
2017-08-08
kiramt
JAL-2587 Added progress bar to overview. Not fully...
tree
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commitdiff
2017-08-08
gmungoc
JAL-2649 JAL-2650 wait for Conservation calc to complet...
tree
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commitdiff
2017-08-08
gmungoc
JAL-2650 configure new viewport settings before selecti...
tree
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commitdiff
2017-08-07
Jim Procter
Merge branch 'bug/JAL-2592userDefinedScheme' into develop
tree
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commitdiff
2017-08-04
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-08-04
kiramt
JAL-2587 First working effort
tree
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commitdiff
2017-08-03
gmungoc
JAL-2435 test for 'mirror font' option visible (not...
tree
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commitdiff
2017-08-03
kiramt
JAL-2587 Attempt to add timed dissolve
tree
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commitdiff
2017-08-01
Jim Procter
Merge branch 'bug/JAL-2632' into develop
tree
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commitdiff
2017-08-01
gmungoc
JAL-2611 reinstate missed merge - again!
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'feature/JAL-2611' into develop
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'bug/JAL-2630gradColourUpdateOverview...
tree
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commitdiff
2017-07-31
kiramt
JAL-2634 Make overview box full height when alignment...
bug/JAL-2634
tree
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commitdiff
2017-07-31
gmungoc
JAL-2623 updated Overview/structure on input of thresho...
bug/JAL-2630gradColourUpdateOverview
tree
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commitdiff
next