JAL-2843 FeatureRenderer.getFeatureFilters returns the map, not a copy
[jalview.git] / src /
2017-11-10 Jim ProcterJAL-2828 refactored duplicate code for searching lists...
2017-11-10 gmungocJAL-2829 fixes and unit tests bug/JAL-2829deleteCharsWithGaps
2017-11-10 gmungocJAL-2562 updated findPosition javadoc to match behaviour
2017-11-10 kiramtJAL-2827 related fixes for stem and non-canonical annot... bug/JAL-2827
2017-11-10 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-09 kiramtJAL-2827 Fix notched repaint of helix annotation when...
2017-11-08 gmungocJAL-2808 i18n, widget state settings
2017-11-08 Jim ProcterMerge branch 'develop' into bug/JAL-2225mapMultipleChains
2017-11-08 gmungocJAL-2069 updated spike to latest
2017-11-08 gmungocJAL-2069 ensure threshline instantiated to avoid NPE
2017-11-08 gmungocJAL-2069 (helper method for) italic titled borders
2017-11-07 Jim ProcterMerge branch 'imp/JAL-2775' into develop
2017-11-07 Jim ProcterJAL-2810 i18n tab label
2017-11-07 kiramtJAL-2774 Added javadoc for new event parameters imp/JAL-2774
2017-11-07 Jim ProcterJAL-2810 ‘Close’ is now ‘Cancel’ in SequenceFetcher...
2017-11-07 Jim ProcterJAL-2810 working back button shown for bulk ID retrieva...
2017-11-07 kiramtJAL-2774 Fix fastpaint of wrapped alignment
2017-11-07 kiramtJAL-2821 refactored drawPartialGroupOutline bug/JAL-2821
2017-11-07 gmungocJAL-2069 update spike to latest (no value colour options)
2017-11-07 gmungocJAL-2069 choice of no / min / max colour if 'no attribu...
2017-11-07 Jim ProcterJAL-2810 bulk fetch for PDB IDs
2017-11-07 gmungocJAL-2069 update spike with latest
2017-11-07 gmungocJAL-2069 corrected overloaded constructor behaviour
2017-11-07 gmungocJAL-2069 update spike branch with latest
2017-11-07 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-07 gmungocJAL-2069 add 'by attribute' options to graduated featur...
2017-11-07 gmungocJAL-2069 add attributeName and noValueColour to Feature...
2017-11-07 gmungocJAL-2816 tweaks to feature visibility checks
2017-11-07 gmungocJAL-2808 tweak to use Iterable for set of matchers
2017-11-07 gmungocJAL-2069 JAL-2808 utility method to build combobox...
2017-11-07 gmungocJAL-2820 limit length of residue tooltip
2017-11-06 gmungocJAL-2069 cache colours generated from labels
2017-11-06 gmungocJAL-2820 include attribute value used for feature colou...
2017-11-06 gmungocJAL-2808 small tweak to getString to quote the pattern...
2017-11-03 gmungocJAL-2808 attribute description as tooltip in dropdown...
2017-11-03 gmungocJAL-2808 JAL-2069 record feature attributes description...
2017-11-02 gmungocJAL-2808 spike updated with latest
2017-11-02 gmungocJAL-2808 only initialise AND and OR buttons once
2017-11-02 gmungocJAL-2808 new Filters tab in Feature Settings
2017-11-02 gmungocJAL-2808 refactored getColor() checks feature visibility
2017-11-02 gmungocJAL-2808 feature filters held on FeatureRenderer, getCo...
2017-11-02 gmungocJAL-2808 convenience method to get attribute as String
2017-11-02 gmungocJAL-2808 attribute filtering removed, extract method...
2017-11-02 gmungocJAL-2808 reverted to develop (attribute filters removed)
2017-11-02 gmungocJAL-2808 toString modified, tests corrected
2017-11-01 kiramtMerge branch 'develop' into imp/JAL-2775 imp/JAL-2775
2017-10-31 gmungocMerge branch 'bug/JAL-2791selectVisibleFeatures' into
2017-10-31 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-10-31 gmungocJAL-2791 select columns by _visible_ features
2017-10-31 gmungocJAL-2808 revised util.matcher package, 2 filter conditi...
2017-10-31 kiramtJAL-2774 Fix repaint artefacts
2017-10-31 kiramtJAL-2774 Fixed merge issues
2017-10-31 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-10-31 Jim ProcterJAL-2810 checkbox label for Autosearch
2017-10-31 Jim ProcterJAL-2810 default border colour
2017-10-31 kiramtJAL-2756 update for new EBI https link
2017-10-31 gmungocJAL-2808 reduce code with WindowAdapter
2017-10-30 gmungocJAL-2791 check feature visibility when selecting columns
2017-10-30 gmungocJAL-2808 add attribute filter options to graduate colou...
2017-10-30 gmungocJAL-2792 Javadoc updates
2017-10-30 gmungocJAL-2808 add attribute filter(s) to FeatureColour
2017-10-30 gmungocJAL-2808 remember attribute keys by feature type
2017-10-30 gmungocJAL-2808 classes to support filtering by attribute...
2017-10-27 Jim ProcterJAL-2810 prototype retrieve ID tab for the Uniprot...
2017-10-27 Jim ProcterJAL-2804 update search results when enter pressed or...
2017-10-27 Jim ProcterJAL-2804 checkbox to enable/disable auto search (with...
2017-10-27 Jim ProcterJAL-2804 kludge method to test if last key event handle...
2017-10-27 gmungocJAL-2526 updated javadoc
2017-10-27 gmungocJAL-1793 spike branch updated to latest
2017-10-27 gmungocJAL-2792 include source in copy constructor; null point...
2017-10-27 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-10-27 gmungocJAL-2792 capture feature metadata and render in Feature...
2017-10-26 Jim ProcterJAL-2488 patch causes of NPE during testStoreAndRecover...
2017-10-26 Jim ProcterMerge branch 'feature/JAL-2488finalize' into develop
2017-10-26 Jim ProcterJAL-2793 cancelling font changed dialog didn't call...
2017-10-26 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-10-26 gmungocJAL-2792 html table for Feature Details report
2017-10-26 Jim ProcterMerge branch 'bug/JAL-2776toggleGroupColour' into develop
2017-10-26 Jim ProcterMerge branch 'features/JAL-2685pairwiseSeqLimits' into...
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2617mappedStopCodon' into develop
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2667mouseWheelWrapped' into develop
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2727closeAllFreeMemory' into...
2017-10-25 gmungocJAL-2743 fall back to parsing description if chromosome...
2017-10-25 Jim ProcterMerge branch 'bugs/JAL-2779_osx_dialogsequencingbroke...
2017-10-25 Jim ProcterJAL-2779 remove empty block and if statement
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into...
2017-10-25 Jim ProcterJAL-2790 provide a cancel button for JABAWS and AACon...
2017-10-25 Jim ProcterJAL-2392 auto boxing rather than explicit Long as key
2017-10-24 gmungocJAL-2495 highlight all mapped sequences from structure...
2017-10-24 Jim ProcterMerge branch 'features/JAL-2608closeOverview' into...
2017-10-24 gmungocJAL-2743 slightly fancier species/assembly matching...
2017-10-24 gmungocJAL-2738 tidy Javadoc, remove debug logging
2017-10-24 gmungocJAL-2743 look up species and gene loci for Ensembl...
2017-10-24 gmungocJAL-1739 Javadoc updated for Lambda expression parser...
2017-10-24 gmungocJAL-2738 update spike branch with latest
2017-10-24 gmungocMerge branch 'develop' into features/JAL-1793VCF; lambd...
2017-10-24 gmungocJAL-2788 corrected merge error in propertyChange
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop
2017-10-23 Jim ProcterJAL-2609 remove unused AlignPanel.fastPaint flag and...
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop
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