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Dont add group if seqs not found
[jalview.git]
/
src
/
2007-01-18
amwaterhouse
Is secondary structure label modified
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commitdiff
2007-01-18
amwaterhouse
Display description
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commitdiff
2007-01-18
amwaterhouse
Descriptions can be added to annotations
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commitdiff
2007-01-17
amwaterhouse
Edit name/description added to applet
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commitdiff
2007-01-17
amwaterhouse
Fit to Window bug fixed
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commitdiff
2007-01-17
jprocter
made atom attributes public (rather than put in get...
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commitdiff
2007-01-17
amwaterhouse
Dont set the font of alignFrameMenubarcvs update applet...
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commitdiff
2007-01-04
amwaterhouse
Send new sequences when firing alignment changed
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commitdiff
2007-01-04
amwaterhouse
Reads in anything following seq id as a description
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commitdiff
2007-01-04
amwaterhouse
HEADER and ATOM must be position 0
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commitdiff
2006-12-21
jprocter
description from vamsas sequence and file type change
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commitdiff
2006-12-21
amwaterhouse
check on sequence length
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commitdiff
2006-12-21
amwaterhouse
getSequenceAsString
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commitdiff
2006-12-21
amwaterhouse
getSequenceAsString
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commitdiff
2006-12-21
amwaterhouse
remove unnecessary import
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commitdiff
2006-12-21
jprocter
type change
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commitdiff
2006-12-19
amwaterhouse
org.vamsas is now uk.ac.vamsas
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commitdiff
2006-12-19
amwaterhouse
description may be null
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commitdiff
2006-12-14
amwaterhouse
set sequence_ref alignment
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commitdiff
2006-12-14
amwaterhouse
Watch out for - symbol lin jnet files
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commitdiff
2006-12-14
amwaterhouse
Are the labels all secondary Strutures? are the display...
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commitdiff
2006-12-14
amwaterhouse
one less cast
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commitdiff
2006-12-11
jprocter
fixed introduced bug (doh)
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commitdiff
2006-12-11
jprocter
clarified help documentation for annotation file format...
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commitdiff
2006-12-11
amwaterhouse
ensure lastSeq is refreshed if new feature added
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commitdiff
2006-12-07
amwaterhouse
set labels null if not being used
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commitdiff
2006-12-07
amwaterhouse
dont add char[] ref to a string
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commitdiff
2006-12-06
jprocter
type change
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commitdiff
2006-12-06
jprocter
typo fix.
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commitdiff
2006-12-06
jprocter
general pairwise substitution score models for pairwise...
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commitdiff
2006-12-06
amwaterhouse
protected ok
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commitdiff
2006-12-06
amwaterhouse
Change text of ok if viewport not null
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commitdiff
2006-12-06
amwaterhouse
textfield has focus
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commitdiff
2006-12-05
amwaterhouse
Set startRes 0 for switch to wrap view
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commitdiff
2006-12-05
amwaterhouse
sequence is char []
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commitdiff
2006-12-05
amwaterhouse
Sequence is char []
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commitdiff
2006-11-30
amwaterhouse
indexOf replaces contains
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commitdiff
2006-11-30
amwaterhouse
char array replaces string for cuts
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commitdiff
2006-11-30
amwaterhouse
DasRegistry moved again
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commitdiff
2006-11-30
amwaterhouse
sg might be null if mouse released after coloumns removed
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commitdiff
2006-11-30
amwaterhouse
Return true or false if file saved
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commitdiff
2006-11-30
amwaterhouse
Warning message if file was not saved, repaint ids...
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commitdiff
2006-11-30
jprocter
fix bad grammar in new alignment title
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commitdiff
2006-11-28
amwaterhouse
CurrentColour must not be accessed by multiple sequence...
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commitdiff
2006-11-28
jprocter
EBI web service interface update (and SequenceFetcher...
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commitdiff
2006-11-28
amwaterhouse
CurrentColour must not be accessed by multiple sequence...
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commitdiff
2006-11-28
amwaterhouse
Dont change ap font from treePanel
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commitdiff
2006-11-28
amwaterhouse
Dont change ap font from treePanel
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commitdiff
2006-11-28
amwaterhouse
Tree title
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commitdiff
2006-11-28
amwaterhouse
REmove system.out
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commitdiff
2006-11-28
amwaterhouse
Loads PDB files from jar file, new views can open PDB...
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commitdiff
2006-11-28
amwaterhouse
No need to create tmpAnnotationPanel every paint
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commitdiff
2006-11-28
amwaterhouse
Translation should not be adjusted outside annotation...
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commitdiff
2006-11-28
amwaterhouse
off by one group consensus calculation
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commitdiff
2006-11-27
amwaterhouse
Cant save to a URL loaded Jar file
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commitdiff
2006-11-27
amwaterhouse
Cant save to a URL loaded Jar file
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commitdiff
2006-11-27
amwaterhouse
Allow new window from output sequences
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commitdiff
2006-11-27
amwaterhouse
New feature type, new colour set
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commitdiff
2006-11-27
amwaterhouse
Some reason final radioButtons added to ButtonGroups...
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commitdiff
2006-11-24
amwaterhouse
seqColours null
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commitdiff
2006-11-24
amwaterhouse
Fix load 1 col hidden bug
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commitdiff
2006-11-24
amwaterhouse
Invert col sel with hidden cols bug fixed
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commitdiff
2006-11-23
amwaterhouse
Dont make groups of hidden sequences
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commitdiff
2006-11-23
amwaterhouse
If alignment is closed, then undo performed in visible...
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commitdiff
2006-11-23
amwaterhouse
If alignment is closed, then undo performed in visible...
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commitdiff
2006-11-23
amwaterhouse
If alignment is closed, then undo performed in visible...
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commitdiff
2006-11-23
amwaterhouse
Transparency......
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commitdiff
2006-11-23
amwaterhouse
If alignment is closed, then undo performed in visible...
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commitdiff
2006-11-23
amwaterhouse
defaultConnectTimeout and NO REPONSE message
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commitdiff
2006-11-23
amwaterhouse
Settooltips null
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commitdiff
2006-11-23
amwaterhouse
Associate PCA with multiple views
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commitdiff
2006-11-23
amwaterhouse
REmove component when frame is closed
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commitdiff
2006-11-23
amwaterhouse
set icon false if raising windows
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commitdiff
2006-11-23
amwaterhouse
Register TreePanel with paintrefresher
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commitdiff
2006-11-22
amwaterhouse
TreePanel added to PaintRefresher, not TreeCanvas
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commitdiff
2006-11-22
amwaterhouse
Dynamically build tree sort menu when sort menu is...
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commitdiff
2006-11-22
amwaterhouse
sort menuListener
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commitdiff
2006-11-22
amwaterhouse
menus renamed
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commitdiff
2006-11-22
amwaterhouse
Associate trees with views
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commitdiff
2006-11-22
amwaterhouse
Renaming viewNames
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commitdiff
2006-11-22
amwaterhouse
View name
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commitdiff
2006-11-22
amwaterhouse
frameListener must call close if AlignFrame
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commitdiff
2006-11-22
amwaterhouse
applet has multiple views
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commitdiff
2006-11-21
amwaterhouse
Seq may be null if hide has occurred
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commitdiff
2006-11-21
jprocter
corrected subtree colour dialogbox title
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commitdiff
2006-11-21
amwaterhouse
Copy to this implemented
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commitdiff
2006-11-21
amwaterhouse
Get alignPanel from treeCanvas
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commitdiff
2006-11-21
amwaterhouse
remove unnesccessary lines
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commitdiff
2006-11-21
amwaterhouse
Set start seq and end seq correctly
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commitdiff
2006-11-21
amwaterhouse
Add more keys
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commitdiff
2006-11-21
amwaterhouse
Change case new implementation
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commitdiff
2006-11-21
jprocter
fix unselectable tree leaf nodes when node mapping...
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commitdiff
2006-11-21
amwaterhouse
Transparency available again
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commitdiff
2006-11-21
amwaterhouse
Right align print and images
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commitdiff
2006-11-21
amwaterhouse
Undo cut from end of alignment, padding on
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commitdiff
2006-11-21
amwaterhouse
preferredSize for spinners
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commitdiff
2006-11-21
amwaterhouse
rightAlignIds
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commitdiff
2006-11-21
amwaterhouse
Colour may have been updated in another view
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commitdiff
2006-11-21
amwaterhouse
Checks on features displayed
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commitdiff
2006-11-21
amwaterhouse
Close associated windows
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commitdiff
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