git://source.jalview.org / jalview.git / history
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
Merge branch 'develop' into features/JAL-1793VCF; lambda Function for
[jalview.git] / src /
2017-09-22 gmungocJAL-2738 lookup GRCh38/37 gene mapping tree | commitdiff
2017-09-21 gmungocJAL-2738 compute VCF on peptide, extract AF (allele... tree | commitdiff
2017-09-21 gmungocJAL-2738 add chromosome coordinate mappings to transcripts tree | commitdiff
2017-09-21 gmungocJAL-2738 PoC of Load VCF file on to gene sequence tree | commitdiff
2017-09-21 gmungocJAL-2738 GeneLoci holds mapping of sequence to chromosome tree | commitdiff
2017-09-19 gmungocJAL-1793 wrapper for plain or indexed VCF + simple... tree | commitdiff
2017-09-18 gmungocMerge remote-tracking branch 'origin/patch/JAL-2732... tree | commitdiff
2017-09-18 gmungocJAL-2728 fine tuned initial split of split frame view tree | commitdiff
2017-09-15 Jim ProcterJAL-1625 ensure we don’t regress on JAL-20 - we always... patch/JAL-2732 tree | commitdiff
2017-09-15 Jim ProcterJAL-1625 javadoc tree | commitdiff
2017-09-15 Jim ProcterJAL-2733 redraw after changing the memory status displa... tree | commitdiff
2017-09-15 Jim ProcterJAL-1625 JAL-1900 preserve the original DesktopManager... tree | commitdiff
2017-09-15 Jim ProcterJAL-1900 JAL-1625 back out OSX specific double buffer... tree | commitdiff
2017-09-15 Jim ProcterJAL-1551 standard code formatting tree | commitdiff
2017-09-15 Jim ProcterJAL-2732 force a redraw after resize/drag to clear... tree | commitdiff
2017-09-15 gmungocJAL-2728 use right denominator for min/max ratio calcul... bug/JAL-2728splitFrameDivision tree | commitdiff
2017-09-15 gmungocJAL-2728 limit divider to ensure seqs visible (wip!) tree | commitdiff
2017-09-15 gmungocJAL-741 add tooltip to feature group checkbox tree | commitdiff
2017-09-12 gmungocMerge branch 'bug/JAL-2721fastPaintNPE' into develop tree | commitdiff
2017-09-07 gmungocJAL-2511 invalidate scale panel holder on font change... tree | commitdiff
2017-09-07 gmungocJAL-2511 invalidate scale panel holder on font change... bug/JAL-2511idAlignment tree | commitdiff
2017-09-06 Jim ProcterJAL-2587 makes sure idWidthAdjuster is resized when... tree | commitdiff
2017-09-06 Jim ProcterJAL-2587 makes sure idWidthAdjuster is resized when... tree | commitdiff
2017-09-06 gmungocJAL-2721 no fastPaint if img has been nulled by fontCha... tree | commitdiff
2017-09-06 gmungocJAL-2721 no fastPaint if img has been nulled by fontCha... bug/JAL-2721fastPaintNPE tree | commitdiff
2017-09-06 Jim ProcterMerge branch 'feature/JAL-2587' into releases/Release_2... tree | commitdiff
2017-09-06 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch' into... tree | commitdiff
2017-09-06 Jim ProcterJAL-2724 patch to fix ClassCastException - method shoul... tree | commitdiff
2017-09-06 gmungocMerge remote-tracking branch 'origin/bug/JAL-2722'... portforward/JAL-2675_2102b1to2103 tree | commitdiff
2017-09-06 kiramtJAL-2587 Removed dissolve tree | commitdiff
2017-09-05 gmungocJAL-2665 check for null selection group image tree | commitdiff
2017-09-05 Jim ProcterMerge branch 'bug/JAL-2722' into releases/Release_2_10_... tree | commitdiff
2017-09-05 gmungocJAL-2665 check for null selection group image tree | commitdiff
2017-09-05 kiramtJAL-2722 Reinstate allGroups value setting in getResidu... tree | commitdiff
2017-09-05 Jim ProcterMerge branch 'bug/JAL-2665-2.10.3' into portforward... tree | commitdiff
2017-09-05 Jim ProcterMerge branch 'master' into portforward/JAL-2675_2102b1t... tree | commitdiff
2017-09-04 Jim ProcterJAL-2675 source license tree | commitdiff
2017-09-04 Jim ProcterMerge branch 'feature/JAL-2587' into documentation... tree | commitdiff
2017-09-04 Jim ProcterMerge branch 'bug/JAL-2673' into documentation/JAL... tree | commitdiff
2017-09-04 kiramtJAL-2673 turn off update to running flag from scrollUp... bug/JAL-2673 tree | commitdiff
2017-09-04 kiramtJAL-2673 Attempt to stop infinite scrolling etc tree | commitdiff
2017-09-04 Jim ProcterJAL-2527 move default colours for applet / application... tree | commitdiff
2017-09-04 Jim ProcterMerge branch 'bug/JAL-2704gapColourFading' into documen... tree | commitdiff
2017-09-04 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch' of... tree | commitdiff
2017-09-04 kiramtJAL-2611 reinstated missed commit tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'feature/JAL-2587' into documentation... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2691_nomultimermapping' into... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2665-2.10.2b' into documentation... bug/JAL-2673_mergewithproblem tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'feature/JAL-2527' into documentation... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'features/JAL-2681_duplicatecrossrefs... tree | commitdiff
2017-08-31 kiramtJAL-2527 Updated Spanish, adjusted UI so Spanish fits tree | commitdiff
2017-08-31 kiramtJAL-2527 Updates following code review tree | commitdiff
2017-08-31 gmungocJAL-2105 REST versions updated to 6.1 (Ensembl) 6.0... tree | commitdiff
2017-08-31 gmungocJAL-2253 safer simpler resolution of identifiers using... tree | commitdiff
2017-08-31 gmungocJAL-2704 unit test for Above PID gap colour, simplified... bug/JAL-2704gapColourFading tree | commitdiff
2017-08-30 gmungocJAL-2704 don't shade gap colour for PID/conservation tree | commitdiff
2017-08-30 kiramtJAL-2527 Code comments, tidy tree | commitdiff
2017-08-30 kiramtJAL-2527 Added default setting/resetting and first... tree | commitdiff
2017-08-30 kiramtJAL-2527 Wired up cached values to overview tree | commitdiff
2017-08-30 kiramtMerge remote-tracking branch 'origin/feature/2588'... tree | commitdiff
2017-08-30 kiramtMerge branch 'feature/JAL-2664' into feature/JAL-2527 tree | commitdiff
2017-08-30 kiramtJAL-2587 Removed dissolve feature/JAL-2587 tree | commitdiff
2017-08-29 kiramtJAL-2664 Updates following review feature/JAL-2664 tree | commitdiff
2017-08-29 kiramtJAL-2527 Added overview prefs - don't get picked up... tree | commitdiff
2017-08-29 Jim ProcterJAL-2698 spawn a thread to test for and raise auto... tree | commitdiff
2017-08-29 kiramtJAL-2665 OOM checks just in case bug/JAL-2665-2.10.2b tree | commitdiff
2017-08-29 kiramtJAL-2665 OOM checks just in case bug/JAL-2665-2.10.3 tree | commitdiff
2017-08-29 kiramtJAL-2665 OOM check tree | commitdiff
2017-08-29 kiramtJAL-2665 ported fix to 2.10.3. Doesn't work. tree | commitdiff
2017-08-29 kiramtJAL-2665 Corrected to draw selections for wrapped printing tree | commitdiff
2017-08-28 kiramtJAL-2527 Started adding overview preferences tree | commitdiff
2017-08-28 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-08-28 kiramtMerge remote-tracking branch 'origin/releases/Release_2... tree | commitdiff
2017-08-28 kiramtJAL-2665 Changes for review comments; printing with... bug/JAL-2665 tree | commitdiff
2017-08-27 Jim ProcterJAL-2691 catchall if passed dataset sequences (tests... tree | commitdiff
2017-08-27 Jim ProcterJAL-2693 TODO comments tree | commitdiff
2017-08-27 Jim ProcterJAL-2691 discover any existing chain mappings for a... tree | commitdiff
2017-08-27 Jim ProcterJAL-2691 cached view combo box value javadoc tree | commitdiff
2017-08-25 kiramtJAL-2587 Removed duplicate events fired to progress bar tree | commitdiff
2017-08-25 kiramtJAL-2587 Removed annoying double repaint on hide insertions tree | commitdiff
2017-08-25 kiramtJAL-2587 Update overview progress bar while drawing... tree | commitdiff
2017-08-25 kiramtJAL-2587 Progress bar sizing tweaks tree | commitdiff
2017-08-25 gmungocJAL-2480 suppress debug timing output that got left in tree | commitdiff
2017-08-25 kiramtJAL-2587 Made progress bar display before overview... tree | commitdiff
2017-08-23 gmungocJAL-2435 last lost commit e926a5d redone tree | commitdiff
2017-08-23 gmungocJAL-2435 last lost commit e926a5d redone tree | commitdiff
2017-08-23 gmungocJAL-2682 non-regex sequence id parsing, and tests added tree | commitdiff
2017-08-22 Jim ProcterJAL-1551 formatting tree | commitdiff
2017-08-22 Jim ProcterJAL-2681 canonicalise DB source before fetching to... tree | commitdiff
2017-08-22 Jim ProcterJAL-2681 formatting tree | commitdiff
2017-08-22 gmungocJAL-2609 tiny tidy features/JAL-2609fastPaintWrapped tree | commitdiff
2017-08-22 gmungocJAL-2609 corrections for print wrapped view tree | commitdiff
2017-08-22 gmungocJAL-2609 tweaks to, and tests for, calculateWrappedGeometry tree | commitdiff
2017-08-21 gmungocJAL-2609 tweaks including fully erasing scale above tree | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2609fastPaintW... tree | commitdiff
2017-08-21 Jim ProcterJAL-2588 don’t test char==gap until we know the shader... feature/2588 tree | commitdiff
2017-08-21 Jim ProcterJAL-2588 field on overview colour finder for default... tree | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList tree | commitdiff
2017-08-18 Jim ProcterMerge branch 'feature/2588' into merge/develop_feature... tree | commitdiff
next