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2.5.1 release branding
[jalview.git]
/
src
/
2010-06-14
jprocter
patch for JAL-572
tree
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commitdiff
2010-06-14
jprocter
2.5.1 release branding
tree
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commitdiff
2010-06-12
jprocter
documented the -colour command line argument.
tree
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commitdiff
2010-06-11
jprocter
stockholm added as readable format (Lauren Lui commit)
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commitdiff
2010-06-11
jprocter
ensure enfin service is started in background when...
tree
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commitdiff
2010-06-11
jprocter
patch for JAL-556 - more robust mapping of sequence...
tree
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commitdiff
2010-06-11
jprocter
patch for JAL-556
tree
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commitdiff
2010-06-11
jprocter
patched for JAL-531 - only display full symbol distribu...
tree
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commitdiff
2010-06-09
jprocter
patch for JAL-545 - make deep copy of feature settings
tree
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commitdiff
2010-06-09
jprocter
patch for JAL-555
tree
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commitdiff
2010-06-09
jprocter
paste menu display on OSX Leopard * JAL-557
tree
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commitdiff
2010-06-09
jprocter
OSX look and feel JAL-577
tree
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commitdiff
2010-06-08
jprocter
followSelections flag now set via user preferences...
tree
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commitdiff
2010-06-08
jprocter
better test for when to update column selection when...
tree
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commitdiff
2010-06-08
jprocter
trim hidden regions outside selection when copying...
tree
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commitdiff
2010-06-08
jprocter
Patch for incorrect column selection when hidden region...
tree
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commitdiff
2010-06-06
jprocter
prevent multiple attempts to initialise logging
tree
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commitdiff
2010-06-06
jprocter
patch for JAL-542
tree
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commitdiff
2010-06-06
jprocter
Fix for * JAL-541
tree
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commitdiff
2010-06-04
jprocter
resolution for * JAL-553
tree
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commitdiff
2010-06-04
jprocter
update group annotation for new treegroups (JAL-552)
tree
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commitdiff
2010-06-04
jprocter
correct popup menu, ensure panel doesn't disappear...
tree
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commitdiff
2010-06-04
jprocter
first patch for JAL-563 - attempt to relayout annotatio...
tree
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commitdiff
2010-06-04
jprocter
patches for JAL-554 and JAL-570
tree
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commitdiff
2010-06-04
jprocter
focus is explicitly handed back to caller (JAL-566)
tree
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commitdiff
2010-06-04
jprocter
ensure panel doesn't disappear when empty (patches...
tree
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commitdiff
2010-06-03
jprocter
patch re JAL-554
tree
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commitdiff
2010-06-03
jprocter
patch ensuring annotation is output correctly re *...
tree
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commitdiff
2010-06-03
jprocter
patch and error reports re JAL-554
tree
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commitdiff
2010-06-03
jprocter
javadoc re JAL-554
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commitdiff
2010-06-01
jprocter
patches for # JAL-254 and JAL-548
tree
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commitdiff
2010-05-21
jprocter
quick workaround for JAL-537.
tree
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commitdiff
2010-05-14
jprocter
partial patch for * JAL-466
tree
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commitdiff
2010-05-14
jprocter
partial patch for * JAL-466
tree
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commitdiff
2010-05-14
jprocter
fix for JAL-533
tree
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commitdiff
2010-05-12
jprocter
patch for JAL-528
tree
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commitdiff
2010-05-12
jprocter
fix for JAL-527
tree
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commitdiff
2010-04-30
jprocter
patch for bug #59999
tree
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commitdiff
2010-04-30
jprocter
sort by length
tree
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commitdiff
2010-04-30
jprocter
jalview 2.5 release banner
tree
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commitdiff
2010-04-29
jprocter
make sure references are intact when group annotation...
tree
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commitdiff
2010-04-29
jprocter
isAligned assertion (bug 0008144)
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commitdiff
2010-04-29
jprocter
property change race condition (bug 0062693) and isAlig...
tree
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commitdiff
2010-04-29
jprocter
hide/show selected region menu entries and key bindings
tree
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commitdiff
2010-04-29
jprocter
new selection manipulation method
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commitdiff
2010-04-29
jprocter
popup menu toggles between graduated colour and single...
tree
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commitdiff
2010-04-29
jprocter
osx pixel tweak
tree
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commitdiff
2010-04-28
jprocter
jog pixels for OSX
tree
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commitdiff
2010-04-28
jprocter
osx button colouring issue
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commitdiff
2010-04-28
jprocter
jog pixels for OSX
tree
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commitdiff
2010-04-28
jprocter
find incrementally searches ID then subsequence matches...
tree
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commitdiff
2010-04-28
jprocter
find incrementally searches ID then subsequence matches.
tree
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commitdiff
2010-04-28
jprocter
graduated feature schemes (with visual indication of...
tree
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commitdiff
2010-04-28
jprocter
null pointer when double click event occurs without...
tree
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commitdiff
2010-04-28
jprocter
make groups from selection
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commitdiff
2010-04-28
jprocter
group/annotation association
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commitdiff
2010-04-28
jprocter
group/annotation association housekeeping
tree
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commitdiff
2010-04-26
jprocter
new applet parameters: heightScale and widthScale
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commitdiff
2010-04-26
jprocter
build date output in the About box, and build details...
tree
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commitdiff
2010-04-26
jprocter
disabled the justify functions for 2.5 release (see...
tree
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commitdiff
2010-04-23
jprocter
skips any annotation that appears to be identical to...
tree
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commitdiff
2010-04-23
jprocter
next attempt for Bug #36198 - appears to work reproducibly
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commitdiff
2010-04-23
jprocter
tooltip is not shown for Annotation elements with zero...
tree
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commitdiff
2010-04-23
jprocter
javadoc
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commitdiff
2010-04-23
jprocter
thread off a Filechooser instance on startup to make...
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commitdiff
2010-04-23
jprocter
default value boolean parameter getter
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commitdiff
2010-04-23
jprocter
fix for bug #8333
tree
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commitdiff
2010-04-23
jprocter
fix for bug #62456
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commitdiff
2010-04-23
jprocter
ported logo rendering and label fit to column width...
tree
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commitdiff
2010-04-23
jprocter
ported basic elements of logo and group annotation...
tree
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commitdiff
2010-04-23
jprocter
refresh table method
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commitdiff
2010-04-23
jprocter
1.1 compatibility
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commitdiff
2010-04-23
jprocter
1.1 compatibility and refresh table method
tree
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commitdiff
2010-04-22
jprocter
non-positional feature export in gff and features file...
tree
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commitdiff
2010-04-22
jprocter
feature settings is updated if new features are added...
tree
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commitdiff
2010-04-22
jprocter
doc and todo about setting position of new internal...
tree
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commitdiff
2010-04-22
jprocter
ensure there's always a space between ID and feature...
tree
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commitdiff
2010-04-16
jprocter
patch for bug #36198 - more to follow on Monday.
tree
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commitdiff
2010-04-16
jprocter
graduated feature color editing
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commitdiff
2010-04-16
jprocter
export graduated feature colors
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commitdiff
2010-04-16
jprocter
todo javadoc
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commitdiff
2010-04-16
jprocter
default for colourBylabel is false
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commitdiff
2010-04-15
jprocter
nullpointer bugfix (another repaint racecondition)
tree
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commitdiff
2010-04-15
jprocter
ID tooltip preference settings and doc
tree
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commitdiff
2010-04-14
jprocter
dialog box appears in centre of desktop window
tree
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commitdiff
2010-04-14
jprocter
todo and disable selection sharing between views on...
tree
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commitdiff
2010-04-14
jprocter
remove debug messages. fix order/reverse order issue...
tree
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commitdiff
2010-04-14
jprocter
profile visualizations are now logos
tree
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commitdiff
2010-04-14
jprocter
fix order/reverse order issue for sortByFeature
tree
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commitdiff
2010-04-05
jprocter
ensure console contains build details in header
tree
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commitdiff
2010-04-05
jprocter
javadoc, and unimplemented warning for group associated...
tree
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commitdiff
2010-04-05
jprocter
unnecessary code
tree
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commitdiff
2010-04-05
jprocter
javadoc
tree
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commitdiff
2010-04-05
jprocter
Extend XML model for graduated feature colours, group...
tree
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commitdiff
2010-04-05
jprocter
extend XML model for graduated feature colours, group...
tree
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commitdiff
2010-04-02
jprocter
javadoc
tree
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commitdiff
2010-04-02
jprocter
made threshold type enumaration into set of constants
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commitdiff
2010-04-02
jprocter
load and save graduated feature colours in XML
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commitdiff
2010-04-02
jprocter
extended Colour element with additional optional attrib...
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commitdiff
2010-04-02
jprocter
indicate the database id source associated with the...
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commitdiff
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