Page setup added
[jalview.git] / src /
2007-01-24 amwaterhousePage setup added
2007-01-23 amwaterhouseboolean for internal copies
2007-01-23 amwaterhouseHidden representatives moved from sequence to viewport
2007-01-23 jprocterrefactoring (added seqIndex/resIndex state for incremen...
2007-01-23 jprocterrefactored search algorithm from gui classes
2007-01-23 jproctertransfer resnum features now returns features (could...
2007-01-19 jprocterreoganization of PDB sequence fetching for sequence...
2007-01-19 jprocterPDBChain maintains reference to dataset of sequences...
2007-01-19 jprocterdatasetSequence derive method and some checks
2007-01-19 amwaterhouseexport features/annotations not for import
2007-01-19 amwaterhouseApplet can output and load annotations, features
2007-01-19 amwaterhouseNeeed to know protocol for annotation loading
2007-01-19 amwaterhouseNeed to know protocol to load anntotations
2007-01-19 jprocterjavadoc
2007-01-19 jprocteradded sequence feature copy constructor.
2007-01-18 jproctertransfer and update of sequenceFeatures for associated...
2007-01-18 jprocterrandom ';'
2007-01-18 jproctertransfer and update of sequenceFeatures for associated...
2007-01-18 jprocterfixed last-residue bug and added sequence feature creat...
2007-01-18 jprocteradded resNum+insCode string field for truly unambiguous...
2007-01-18 amwaterhouseAdd the last sequence before annotations
2007-01-18 amwaterhouseTake scrollOffset into account
2007-01-18 amwaterhouseTool tip for annotation description
2007-01-18 amwaterhouseSet description on copy
2007-01-18 amwaterhouseSet tooltip
2007-01-18 amwaterhouse1.1 enabled
2007-01-18 amwaterhouseput vamsas bit back in
2007-01-18 amwaterhouseFile Parsing returns Alignments, not Sequence[]
2007-01-18 amwaterhouseIs secondary structure label modified
2007-01-18 amwaterhouseDisplay description
2007-01-18 amwaterhouseDescriptions can be added to annotations
2007-01-17 amwaterhouseEdit name/description added to applet
2007-01-17 amwaterhouseFit to Window bug fixed
2007-01-17 jproctermade atom attributes public (rather than put in get...
2007-01-17 amwaterhouseDont set the font of alignFrameMenubarcvs update applet...
2007-01-04 amwaterhouseSend new sequences when firing alignment changed
2007-01-04 amwaterhouseReads in anything following seq id as a description
2007-01-04 amwaterhouseHEADER and ATOM must be position 0
2006-12-21 jprocterdescription from vamsas sequence and file type change
2006-12-21 amwaterhousecheck on sequence length
2006-12-21 amwaterhousegetSequenceAsString
2006-12-21 amwaterhousegetSequenceAsString
2006-12-21 amwaterhouseremove unnecessary import
2006-12-21 jproctertype change
2006-12-19 amwaterhouseorg.vamsas is now uk.ac.vamsas
2006-12-19 amwaterhousedescription may be null
2006-12-14 amwaterhouseset sequence_ref alignment
2006-12-14 amwaterhouseWatch out for - symbol lin jnet files
2006-12-14 amwaterhouseAre the labels all secondary Strutures? are the display...
2006-12-14 amwaterhouseone less cast
2006-12-11 jprocterfixed introduced bug (doh)
2006-12-11 jprocterclarified help documentation for annotation file format...
2006-12-11 amwaterhouseensure lastSeq is refreshed if new feature added
2006-12-07 amwaterhouseset labels null if not being used
2006-12-07 amwaterhousedont add char[] ref to a string
2006-12-06 jproctertype change
2006-12-06 jproctertypo fix.
2006-12-06 jproctergeneral pairwise substitution score models for pairwise...
2006-12-06 amwaterhouseprotected ok
2006-12-06 amwaterhouseChange text of ok if viewport not null
2006-12-06 amwaterhousetextfield has focus
2006-12-05 amwaterhouseSet startRes 0 for switch to wrap view
2006-12-05 amwaterhousesequence is char []
2006-12-05 amwaterhouseSequence is char []
2006-11-30 amwaterhouseindexOf replaces contains
2006-11-30 amwaterhousechar array replaces string for cuts
2006-11-30 amwaterhouseDasRegistry moved again
2006-11-30 amwaterhousesg might be null if mouse released after coloumns removed
2006-11-30 amwaterhouseReturn true or false if file saved
2006-11-30 amwaterhouseWarning message if file was not saved, repaint ids...
2006-11-30 jprocterfix bad grammar in new alignment title
2006-11-28 amwaterhouseCurrentColour must not be accessed by multiple sequence...
2006-11-28 jprocterEBI web service interface update (and SequenceFetcher...
2006-11-28 amwaterhouseCurrentColour must not be accessed by multiple sequence...
2006-11-28 amwaterhouseDont change ap font from treePanel
2006-11-28 amwaterhouseDont change ap font from treePanel
2006-11-28 amwaterhouseTree title
2006-11-28 amwaterhouseREmove system.out
2006-11-28 amwaterhouseLoads PDB files from jar file, new views can open PDB...
2006-11-28 amwaterhouseNo need to create tmpAnnotationPanel every paint
2006-11-28 amwaterhouseTranslation should not be adjusted outside annotation...
2006-11-28 amwaterhouseoff by one group consensus calculation
2006-11-27 amwaterhouseCant save to a URL loaded Jar file
2006-11-27 amwaterhouseCant save to a URL loaded Jar file
2006-11-27 amwaterhouseAllow new window from output sequences
2006-11-27 amwaterhouseNew feature type, new colour set
2006-11-27 amwaterhouseSome reason final radioButtons added to ButtonGroups...
2006-11-24 amwaterhouseseqColours null
2006-11-24 amwaterhouseFix load 1 col hidden bug
2006-11-24 amwaterhouseInvert col sel with hidden cols bug fixed
2006-11-23 amwaterhouseDont make groups of hidden sequences
2006-11-23 amwaterhouseIf alignment is closed, then undo performed in visible...
2006-11-23 amwaterhouseIf alignment is closed, then undo performed in visible...
2006-11-23 amwaterhouseIf alignment is closed, then undo performed in visible...
2006-11-23 amwaterhouseTransparency......
2006-11-23 amwaterhouseIf alignment is closed, then undo performed in visible...
2006-11-23 amwaterhousedefaultConnectTimeout and NO REPONSE message
2006-11-23 amwaterhouseSettooltips null
2006-11-23 amwaterhouseAssociate PCA with multiple views
2006-11-23 amwaterhouseREmove component when frame is closed
next