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Merge branch 'documentation/JAL-3766_relnotes' into releases/Release_2_11_1_Branch
[jalview.git] / test / jalview / datamodel /
2017-11-21 kiramtJAL-2759 corrected old getVisibleBlocksIterator calls... tree | commitdiff
2017-11-21 kiramtJAL-2759 Remove getVisibleBlocksIterator call tree | commitdiff
2017-11-21 kiramtMerge branch 'develop' into feature/JAL-2759 tree | commitdiff
2017-11-21 kiramtJAL-2759 BoundedStartRegionIterator test tree | commitdiff
2017-11-21 kiramtJAL-2759 unit tests for VisibleContigsIterator tree | commitdiff
2017-11-20 kiramtJAL-2759 improvements to speed up synchronisation;... tree | commitdiff
2017-11-17 kiramtJAL-2759 tidy tree | commitdiff
2017-11-17 kiramtJAL-2759 Update tests tree | commitdiff
2017-11-17 kiramtJAL-2759 Convert reveal to use cursor tree | commitdiff
2017-11-17 kiramtJAL-2759 HiddenColumnsCursor tests tree | commitdiff
2017-11-15 gmungocJAL-2835 spike updated with latest tree | commitdiff
2017-11-15 gmungocJAL-2835 support filter/colour by nested attribute... tree | commitdiff
2017-11-13 gmungocMerge branch 'bug/JAL-2829deleteCharsWithGaps' into tree | commitdiff
2017-11-13 kiramtJAL-2759 convert findColumnPosition to use cursor tree | commitdiff
2017-11-10 gmungocJAL-2829 fixes and unit tests bug/JAL-2829deleteCharsWithGaps tree | commitdiff
2017-11-10 gmungocJAL-2829 unit tests for failing cases tree | commitdiff
2017-11-08 kiramtMerge branch 'develop' into feature/JAL-2759 tree | commitdiff
2017-11-06 Jim ProcterMerge branch 'bug/JAL-2541cutRelocateFeatures' into... tree | commitdiff
2017-11-02 gmungocJAL-2808 spike updated with latest tree | commitdiff
2017-10-31 gmungocJAL-2792 test updated for 3 column table tree | commitdiff
2017-10-27 gmungocJAL-1793 spike branch updated to latest tree | commitdiff
2017-10-26 gmungocJAL-2792 html table for Feature Details report tree | commitdiff
2017-10-24 gmungocJAL-2738 update spike branch with latest tree | commitdiff
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2682parseId' into develop tree | commitdiff
2017-10-11 gmungocJAL-2772 check array bounds for sequence access bug/JAL-2772pdbArrayBounds tree | commitdiff
2017-10-11 gmungocMerge branch 'bug/JAL-2742' into develop tree | commitdiff
2017-10-11 gmungocJAL-2742 set HiddenColumns null for no hidden coluns... tree | commitdiff
2017-10-11 kiramtJAL-2742 test updates following review tree | commitdiff
2017-10-11 kiramtJAL-2742 minor test updates following review tree | commitdiff
2017-10-06 kiramtJAL-2674 Last moves to iterators tree | commitdiff
2017-10-04 kiramtJAL-2674 more adjustments to locateVisibleBoundsOfSequence tree | commitdiff
2017-10-04 kiramtJAL-2674 Simplify locateVisibleBoundsOfSequence tree | commitdiff
2017-10-03 kiramtJAL-2647 unit test tree | commitdiff
2017-10-03 kiramtJAL-2674 testing tree | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo tree | commitdiff
2017-09-29 kiramtJAL-2674 Tidies tree | commitdiff
2017-09-29 kiramtJAL-2674 finish with iterators for now tree | commitdiff
2017-09-29 kiramtJAL=2674 Removed getHiddenColumnsCopy tree | commitdiff
2017-09-29 kiramtJAL-2674 reverted attempt at visible regions iterator tree | commitdiff
2017-09-28 kiramtJAL-2647 more iterators tree | commitdiff
2017-09-27 kiramtJAL-2674 Removing most calls to getHiddenColumnsCopy tree | commitdiff
2017-09-26 kiramtJAL-2742 uncomment test tree | commitdiff
2017-09-26 kiramtJAL-2674 uncomment test tree | commitdiff
2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2742'... tree | commitdiff
2017-09-26 kiramtJAL-2742 CigarArray constructor unit test tree | commitdiff
2017-09-26 kiramtJAL-2674 Unit test for new copy constructor. tree | commitdiff
2017-09-26 kiramtJAL-2647 Added iterators and associated tests and bench... tree | commitdiff
2017-09-25 gmungocJAL-2525 return no features if none matches ontology... tree | commitdiff
2017-09-22 kiramtJAL-2674 add bounds to findHiddenRegionPositions tree | commitdiff
2017-09-21 kiramtJAL-2674 unit test for gapBitSet tree | commitdiff
2017-09-21 kiramtJAL-2674 Reset tests tree | commitdiff
2017-09-20 kiramtJAL-2674 fix up interface of locateVisibleBoundsOfSequence tree | commitdiff
2017-09-20 kiramtJAL-2674 Transferred updated unit tests from first... tree | commitdiff
2017-09-14 gmungocJAL-2541 unit test added tree | commitdiff
2017-09-14 gmungocJAL-2541 length check in deleteChars (redoing lost... tree | commitdiff
2017-09-14 gmungocJAL-2541 working Cut/Undo with feature relocation tree | commitdiff
2017-09-14 gmungocJAL-2541 revised cut with features (work in progress) tree | commitdiff
2017-08-23 gmungocJAL-2481 a smidgin more test coverage of findFeatures tree | commitdiff
2017-08-23 gmungocJAL-2682 non-regex sequence id parsing, and tests added tree | commitdiff
2017-07-24 gmungocspike branch updated from latest features/JAL-2446 tree | commitdiff
2017-07-19 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-07-05 gmungocJAL-147 additions to unit test, check for negative... tree | commitdiff
2017-07-05 gmungocJAL-147 prevent overview box move up over hidden first... tree | commitdiff
2017-06-30 gmungocJAL-2505 correct handling of change of feature type tree | commitdiff
2017-06-30 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-29 kiramtJAL-2597 Fix and unit test bug/JAL-2597 tree | commitdiff
2017-06-27 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-24 gmungocJAL-2547 fix case of gap followed by enclosing contact... tree | commitdiff
2017-06-22 gmungocJAL-2481 JAL-2593 JAL-2526 further optimisation of... tree | commitdiff
2017-06-22 gmungocJAL-2480 simpler and safer test to avoid adding duplicates tree | commitdiff
2017-06-21 gmungocJAL-2480 tidy generic initialisations, SequenceFeatures... tree | commitdiff
2017-06-15 gmungocMerge branch 'bug/JAL-2386groupConservationColouring... tree | commitdiff
2017-06-14 gmungocJAL-2598 Sequence.getSequence return a copy of the... tree | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch tree | commitdiff
2017-06-08 gmungocJAL-2526 correct boundary conditions for sequence left... tree | commitdiff
2017-06-08 gmungocJAL-2386 JAL-2570 use ResidueShader copy constructor... bug/JAL-2386groupConservationColouring tree | commitdiff
2017-06-08 kiramtJAL-2591 Refactor HiddenColumns to use ArrayList instea... tree | commitdiff
2017-06-08 kiramtJAL-2591 More HiddenColumns refactoring. Tests passing. tree | commitdiff
2017-06-08 gmungocJAL-2526 cache first/last residue column positions... tree | commitdiff
2017-06-07 kiramtJAL-2591 Further refactoring (still incomplete) tree | commitdiff
2017-06-07 kiramtJAL-2591 More refactoring (incomplete) tree | commitdiff
2017-06-07 kiramtJAL-2591 Hidden columns regions can be output to string... tree | commitdiff
2017-06-07 kiramtJAL-2591 updated HiddenColumns::findHiddenRegionPositio... tree | commitdiff
2017-06-07 gmungocJAL-2386 ensure group conservation shading is applied... tree | commitdiff
2017-06-05 gmungocJAL-2480 remove redundant method, further test coverage tree | commitdiff
2017-06-05 gmungocMerge branch 'features/JAL-2526sequenceCursor' into tree | commitdiff
2017-06-05 gmungocMerge branch 'features/JAL-2446NCList' into tree | commitdiff
2017-06-05 gmungocMerge branch 'features/JAL-2446NCList' into features/JAL-2526sequenceCursor tree | commitdiff
2017-06-05 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-04 Jim ProcterJAL-2291 get bitset representing hidden columns tree | commitdiff
2017-06-04 Jim ProcterJAL-2291 method taking a BitSet for hiding columns tree | commitdiff
2017-06-04 Jim ProcterJAL-2291 fixed broken asserts for SequenceI.getInsertio... tree | commitdiff
2017-06-04 Jim ProcterJAL-2291 SequenceI.getInsertionsAsBits for convenient... tree | commitdiff
2017-06-02 gmungocJAL-2526 additional tests for findPosition with/without... tree | commitdiff
2017-06-01 gmungocJAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn tree | commitdiff
2017-05-30 gmungocMerge branch 'features/JAL-2446NCList' into features... tree | commitdiff
2017-05-30 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-05-30 gmungocJAL-2570 don't zap group colour scheme when mapping... tree | commitdiff
2017-05-30 gmungocJAL-2526 first draft of findIndex/findPosition with... tree | commitdiff
2017-05-29 gmungocJAL-2526 Sequence.findPositions to get residue position... tree | commitdiff
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