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JAL-3596 change redacted
[jalview.git]
/
test
/
jalview
/
datamodel
/
2017-05-15
Jim Procter
JAL-2507 fix test: knockon from capitalisation on secon...
bug/JAL-2507_rnasecstrstockholm
tree
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commitdiff
2017-05-15
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-12
gmungoc
JAL-2525 get sequence features for Ontology term(s...
tree
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commitdiff
2017-05-12
gmungoc
JAL-2480 more efficient contains check on add; tidied...
tree
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commitdiff
2017-05-09
gmungoc
JAL-2480 include sequenceFeatureStore in createDatasetS...
tree
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commitdiff
2017-05-08
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
features/JAL-2388hiddencolumnschanges
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
tree
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commitdiff
2017-05-03
Jim Procter
JAL-2503 AlignmentAnnotation.isQuantitative() test
tree
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commitdiff
2017-05-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-02
Jim Procter
Merge branch 'bug/JAL-2424getVisibleContigs' into develop
tree
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commitdiff
2017-04-28
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-04-27
Jim Procter
JAL-2494 test to cover AnnotatedCollectionI.findAnnotat...
tree
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commitdiff
2017-04-27
gmungoc
JAL-2492 use SequenceFeatures.getNonPositionalFeatures()
tree
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commitdiff
2017-04-27
gmungoc
JAL-2480 don't allow null type in SequenceFeature
tree
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commitdiff
2017-04-26
kiramt
Merge remote-tracking branch 'origin/features/JAL-2388h...
tree
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commitdiff
2017-04-26
kiramt
JAL-2388 last separation of hidden columns/col selection
tree
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commitdiff
2017-04-25
kiramt
JAL-2388 Working hidden regions hide/show in desktop
tree
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commitdiff
2017-04-24
kiramt
Merge remote-tracking branch
tree
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commitdiff
2017-04-24
kiramt
JAL-2388 Finished split of hidden columns and selected...
tree
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commitdiff
2017-04-24
gmungoc
JAL-2424 final contig now an inclusive range
bug/JAL-2424getVisibleContigs
tree
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commitdiff
2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
tree
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commitdiff
2017-04-21
kiramt
JAL-2388 Alignment col and row collections with iterators
tree
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commitdiff
2017-04-20
gmungoc
JAL-2483 JAL-2481 findAllFeatures without scanning...
tree
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commitdiff
2017-04-19
gmungoc
JAL-2480 cache min-max score values per sequence and...
tree
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commitdiff
2017-04-19
kiramt
Merge remote-tracking branch 'origin/develop' into
tree
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commitdiff
2017-04-19
gmungoc
JAL-2483 use SequenceFeatures to look up groups, types...
tree
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commitdiff
2017-04-18
gmungoc
JAL-2480 subtract from total length on deleting feature
tree
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commitdiff
2017-04-18
gmungoc
JAL-2480 more test coverage
tree
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commitdiff
2017-04-18
gmungoc
JAL-2480 test coverage / bug fixes / javadoc
tree
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commitdiff
2017-04-18
gmungoc
JAL-2480 SequenceFeaturesI encapsulates features api
tree
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commitdiff
2017-04-17
gmungoc
JAL-2446 promote Range from test to src to replace...
tree
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commitdiff
2017-04-17
gmungoc
JAL-2446 tidied up / generalised binary search in Featu...
tree
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commitdiff
2017-04-17
gmungoc
JAL-2446 add call to SequenceFeatures.delete(); use...
tree
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commitdiff
2017-04-12
gmungoc
JAL-2446 getGroups, getFeatures for positional/non...
tree
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commitdiff
2017-04-11
gmungoc
JAL-2446 find feature types for one or more groups...
tree
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commitdiff
2017-04-11
gmungoc
JAL-2446 getFeatureTypesForGroup() added
tree
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commitdiff
2017-04-11
gmungoc
JAL-2446 added getFeatureGroups
tree
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commitdiff
2017-04-10
gmungoc
JAL-2446 SequenceFeatures.hasFeatures() added
tree
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commitdiff
2017-04-10
gmungoc
JAL-2446 FeatureStore.isEmpty() added
tree
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commitdiff
2017-04-07
gmungoc
JAL-2446 fix size maintenance during add
tree
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commitdiff
2017-04-07
gmungoc
JAL-2446 added delete/contains to pseudo-random tests...
tree
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commitdiff
2017-04-06
gmungoc
JAL-2446 added contains, delete, checks for inclusion...
tree
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commitdiff
2017-04-06
gmungoc
JAL-2446 pseudo-random test of findOverlaps, bug fix...
tree
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commitdiff
2017-04-05
gmungoc
JAL-2446 various get and find methods added with test...
tree
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commitdiff
2017-04-03
gmungoc
JAL-2446 pseudo-random generator unit test, and fixes...
tree
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commitdiff
2017-03-31
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-03-31
gmungoc
JAL-2405 additional checks for circular reference in...
tree
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commitdiff
2017-03-29
kiramt
JAL-2388 New iterators and tests
tree
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commitdiff
2017-03-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-653_JAL-1766_htslib_refseqsupport
tree
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commitdiff
2017-03-20
gmungoc
JAL-2446 FeatureStore with NCList - work in progress
tree
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commitdiff
2017-03-17
kiramt
JAL-2437 Synchronization corrections and unit tests
tree
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commitdiff
2017-03-17
kiramt
JAL-2388 Renamed column and row subtraction functions
tree
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commitdiff
2017-03-14
kiramt
JAL-2388 New hidden cols/seqs functions to support...
tree
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commitdiff
2017-03-10
kiramt
JAL-2437 Fixed reordering of sequences when hiding...
tree
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commitdiff
2017-03-07
kiramt
JAL-2429 findColumnPosition returns 0 for cols in regio...
tree
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commitdiff
2017-03-07
kiramt
JAL-2429 Additional fix to ColumnSelection when hidden...
tree
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commitdiff
2017-03-03
kiramt
JAL-2429 Fix to ColumnSelection::findColumnPosition
tree
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commitdiff
2017-02-15
Jim Procter
JAL-2374 tests for SequenceGroup.contains
tree
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commitdiff
2017-02-15
Jim Procter
JAL-2374 JAL-1270 assign SequenceGroup tests to ‘Functi...
tree
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commitdiff
2017-02-09
gmungoc
JAL-2405 check for circular reference in SequenceGroup...
tree
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commitdiff
2017-01-20
gmungoc
Merge branch 'features/JAL-2360colourSchemeApplicabilit...
tree
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commitdiff
2017-01-20
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
tree
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commitdiff
2017-01-19
gmungoc
JAL-2370 unit tests for extracted ColumnSelection.stret...
tree
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commitdiff
2017-01-17
gmungoc
JAL-2370 fix bug when hiding a range including two...
tree
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commitdiff
2017-01-06
gmungoc
Merge branch 'features/JAL-2360colourSchemeApplicabilit...
tree
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commitdiff
2017-01-06
gmungoc
Merge branch 'develop' into features/JAL-2360colourSche...
tree
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commitdiff
2017-01-05
gmungoc
JAL-2374 unit test for (modified) Alignment.findGroup()
tree
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commitdiff
2017-01-05
gmungoc
JAL-2371 tests added
tree
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commitdiff
2016-12-21
gmungoc
JAL-2360 Javadoc and test cases for findAnnotation
tree
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commitdiff
2016-11-29
gmungoc
JAL-2329 tests to confirm behaviour of Java extended...
tree
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commitdiff
2016-11-28
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2016-11-28
tcofoegbu
Merge branch 'features/JAL-2326_JOptionPane-refactoring...
tree
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commitdiff
2016-11-25
gmungoc
Merge branch 'develop' into trialMerge
tree
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commitdiff
2016-11-24
tcofoegbu
JAL-2326 added setup method for JvOptionPane in all...
features/JAL-2326_JOptionPane-refactoring
tree
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commitdiff
2016-11-24
Jim Procter
JAL-2325 apply license to new source files
tree
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commitdiff
2016-11-23
Jim Procter
Merge branch 'bug/JAL-2323disulfideOverview' into develop
tree
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commitdiff
2016-11-22
Jim Procter
Merge branch 'features/JAL-1738_JAL-345_selectionfromhi...
tree
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commitdiff
2016-11-17
gmungoc
JAL-2327 add isContactFeature
tree
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commitdiff
2016-11-16
gmungoc
JAL-2324 fix and tests for comparison of Float.NaN...
tree
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commitdiff
2016-11-16
gmungoc
Merge branch 'develop' into features/JAL-2295setChimera...
tree
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commitdiff
2016-11-04
gmungoc
JAL-966 JAL-1854 removed redundant methods / modifiers...
tree
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commitdiff
2016-11-02
Jim Procter
JAL-345 JAL-1738 fix test (still passes)
tree
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commitdiff
2016-11-02
Jim Procter
JAL-354 JAL-1738 add returns SearchResultMatchI instanc...
tree
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commitdiff
2016-11-02
gmungoc
JAL-98 test updated for percentage rounded
tree
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commitdiff
2016-11-02
gmungoc
JAL-98 Profile and ResidueCount moved from analysis...
tree
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commitdiff
2016-11-01
Jim Procter
JAL-345 JAL-1738 strengthen test for cardinalty count...
tree
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commitdiff
2016-11-01
Jim Procter
JAL-345 JAL-1738 typo
tree
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commitdiff
2016-11-01
Jim Procter
JAL-345 JAL-1738 new tests (failing) for SearchResultsI...
tree
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commitdiff
2016-10-28
Jim Procter
JAL-966 JAL-1738 JAL-345 interfaces for SearchResults...
tree
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
tree
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commitdiff
2016-10-24
Jim Procter
Merge branch 'releases/Release_2_10_0_Branch'
tree
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commitdiff
2016-10-06
gmungoc
Merge branch 'develop' into task/JAL-2196pdbeProperties
tree
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commitdiff
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 apply license
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 format tests
tree
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commitdiff
2016-10-05
gmungoc
Merge branch 'develop' into task/JAL-2196pdbeProperties
tree
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commitdiff
2016-10-05
Jim Procter
Revert "JAL-2245 Castor mapping and code changes for...
tree
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commitdiff
2016-10-04
gmungoc
Merge branch 'bug/JAL-2245enaXmlChange' into develop
tree
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commitdiff
next