Merge branch 'alpha/origin_2022_JAL-3066_Jalview_212_slivka-integration' into spike...
[jalview.git] / test / jalview / util /
2022-12-13 Jim ProcterMerge branch 'alpha/origin_2022_JAL-3066_Jalview_212_sl...
2022-11-21 Jim ProcterMerge commit 'alpha/update_2_12_for_2_11_2_series_merge...
2021-11-23 Mateusz WarownyJAL-3066 Fix ambiguous assertEquals casting values...
2021-09-16 Ben SoaresJAL-3761 listToArray became rangeListToArray
2021-09-16 gmungocJAL-3761 locateInFrom/To revised with tests; unused...
2021-09-16 gmungocJAL-3761 debugged and working (but not tidied) locateIn...
2021-09-16 gmungocJAL-3761 locateInFrom2 work in progress commit
2021-09-15 gmungocJAL-3761 unit test for MapList.countPos()
2021-09-15 gmungocJAL-3761 failing test, formatting, method renamed
2021-09-15 gmungocJAL-3761 failing tests for locateInFrom/To with overlap...
2021-09-15 gmungocJAL-3751 only merge strictly contiguous ranges of mappings
2021-07-25 Jim ProcterJAL-2994 disable tests for FileUtils path search method...
2021-02-17 Jim ProcterMerge branch 'feature/JAL-3692enaEndpoint' into patch...
2020-12-14 Jim ProcterMerge branch 'Jalview-JS/develop' into merge_js_develop
2020-10-28 Jim ProcterJAL-3760 fix tests for changed behaviour
2020-07-21 gmungocJAL-3692 EMBL flatfile fetcher / parser (todo: CDS...
2020-06-11 gmungocJAL-3624 code tidy
2020-06-02 gmungocJAL-3446 fix broken test
2020-05-18 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into...
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop
2020-04-23 Jim ProcterMerge branch 'develop' into alpha/JAL-3362_Jalview_212_...
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati...
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into...
2020-04-13 gmungocJAL-3574 test coverage corners bug/JAL-3574filterByPOS
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e...
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop
2020-03-09 gmungocJAL-3528 unit tests added for failed lookup, Javadoc
2020-02-14 Jim ProcterJAL-3531 failing test
2020-01-23 gmungocJAL-3121 'attributes map' in GFF3 without special ...
2019-08-22 gmungocJAL-3121 round trip GFF attributes including map-valued...
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge
2019-07-10 Jim ProcterMerge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
2019-06-04 Jim ProcterMerge branch 'develop' into developtomchmmer
2019-05-02 gmungocJAL-3244 renamed Platform method for clarity bug/JAL-3244jmolWindows
2019-05-01 gmungocJAL-3244 ignore file path separator when comparing...
2019-04-11 Jim ProcterMerge branch 'develop' into task/JAL-3130_Java_11_inves...
2019-03-29 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-03-28 gmungocJAL-1889 patch for failing isControDown test on build...
2019-03-28 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-03-28 gmungocMerge branch 'feature/JAL-3181linkOrdering' into develop
2019-03-23 gmungocJAL-1889 remove debug logging, add updateLayout()
2019-03-21 gmungocJAL-1889 diagnostics for failing test on server
2019-03-19 Ben SoaresJAL-3130 Merge of JAL-3130_Java_11_investigations-Ben...
2019-03-13 gmungocMerge branch 'develop' into trialMerge
2019-03-04 gmungocMerge remote-tracking branch 'origin/tasks/JAL-3035_rem...
2019-01-29 hansonrtest package fix for List<DBRefEntry> DBrefs (untested)
2019-01-04 gmungocJAL-3181 simplified code and test
2019-01-03 gmungocJAL-3181 order link menu items
2018-12-18 gmungocJAL-3048 DialogRunnerI reduced to minimal implementation
2018-12-18 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into
2018-12-17 gmungocJAL-3048 updated test class (not on classpath!) for...
2018-12-13 Ben SoaresJAL-3130 Fixing a few more tests that pass on a Mac...
2018-12-13 Ben SoaresJAL-3130 Attempting to fix 8 tests that pass on a Mac...
2018-12-10 gmungocJAL-3048 wip externalise trigger from RunResponse
2018-12-10 gmungocJAL-3048 DialogRunner changes (wip)
2018-11-01 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into
2018-10-25 gmungocJAL-3143 comma-delimited feature attributes for alleles,
2018-09-18 Jim ProcterJAL-3035 more dedasification
2018-08-02 Jim ProcterJAL-2994 put ‘\’ first in character class clause of...
2018-07-02 Jim ProcterJAL-3048 allow a chain of responses for a particular...
2018-06-29 Jim ProcterJAL-3048 jalview.utils.dialogrunner.DialogRunner allows...
2018-06-05 gmungocMerge branch 'develop' into features/mchmmer
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList
2018-05-29 Mungo CarstairsJAL-2994 utility method to match a list of folder/file...
2018-05-28 gmungocJAL-2994 use pattern matches to search for chimera.exe
2018-05-14 gmungocJAL-2711 removed unused and flaky utility method
2018-05-08 gmungocMerge branch 'develop' into features/mchmmer
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into...
2018-05-04 gmungocJAL-2965 graduate brightness on z-axis from centre...
2018-04-30 gmungocJAL-2965 graduated sequence point colour from back...
2018-04-12 gmungocJAL-2223 don't add duplicate mappings to StructureSelec...
2018-03-30 gmungocJAL-2599 MapList from HMM nodes to consensus dataset...
2018-03-30 gmungocJAL-2599 move utility method to MappingUtils
2018-03-16 gmungocMerge branch 'develop' into trialMerge
2018-03-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into...
2018-02-23 gmungocJAL-2599 parser and datamodel use primitive double...
2018-02-20 gmungocMerge branch 'develop' into features/mchmmer
2018-01-10 gmungocJAL-1793 update spike branch to latest
2017-12-08 gmungocJAL-2843 toStableString, fromString for Jalview feature...
2017-12-04 gmungocJAL-2808 JAL-2850 update spike build to latest
2017-12-01 gmungocJAL-2835 spike updated to latest (use specific SO term...
2017-11-28 gmungocJAL-2850 MapList.isToForwardStrand added
2017-11-24 gmungocJAL-2808 update spike to latest
2017-11-24 gmungocJAL-2808 refine FeatureMatcher interface and matcher...
2017-11-23 gmungocJAL-2808 refactor KeyedMatcher as FeatureMatcher with...
2017-11-23 gmungocJAL-2808 update spike to latest (filter range, Present...
2017-11-23 gmungocJAL-2808 added conditions Present, NotPresent as options
2017-11-15 gmungocJAL-2835 spike updated with latest
2017-11-15 gmungocJAL- 2835 support filter on nested attribute keys
2017-11-15 gmungocJAL-1270 add missing "Functional" to tests
2017-11-08 kiramtMerge branch 'develop' into feature/JAL-2759
2017-11-07 gmungocJAL-2069 update spike branch with latest
2017-11-07 gmungocJAL-2808 tweak to use Iterable for set of matchers
2017-11-06 gmungocJAL-2808 small tweak to getString to quote the pattern...
2017-11-02 gmungocJAL-2808 spike updated with latest
2017-11-02 gmungocJAL-2808 toString modified, tests corrected
2017-10-31 gmungocJAL-2808 revised util.matcher package, 2 filter conditi...
2017-10-30 gmungocJAL-2808 classes to support filtering by attribute...
2017-10-27 gmungocJAL-1793 spike branch updated to latest
2017-10-26 gmungocMerge branch 'develop' into features/JAL-1793VCF
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