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JAL-1681 work around ConcurrentModificationException on startup
[jalview.git]
/
test
/
2015-04-08
gmungoc
JAL-1270 protection against NullPointer when run as...
tree
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commitdiff
2015-04-08
gmungoc
JAL-1270 separated standalone tests out of Jws2ParamVie...
tree
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commitdiff
2015-04-07
gmungoc
JAL-1270 test added
tree
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commitdiff
2015-04-07
gmungoc
JAL-1691 linked scrollling in split frame (Desktop)
tree
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commitdiff
2015-04-02
gmungoc
JAL-1690 'scale protein as cDNA' options in Preferences...
tree
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commitdiff
2015-04-01
gmungoc
JAL-845 fixed start/end range of a mapped SequenceGroup
tree
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commitdiff
2015-03-30
gmungoc
JAL-1264 remove broken applet build dependencies
tree
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commitdiff
2015-03-30
gmungoc
JAL-1270 fall back on compbio if no localhost:8080...
tree
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commitdiff
2015-03-30
gmungoc
JAL-1596 refactoring to allow unit tests to start and...
tree
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commitdiff
2015-03-30
gmungoc
JAL-1270 Cache.logger initialisation added
tree
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commitdiff
2015-03-27
tcofoegbu
merge commit
tree
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commitdiff
2015-03-26
tcofoegbu
JAL-1667 updated parseJsonExceptionString method in...
features/JAL-1667_PDBe_Search_API
tree
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commitdiff
2015-03-26
tcofoegbu
Updated BioJsHTMLOutputTest asserts to include error...
tree
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commitdiff
2015-03-26
tcofoegbu
Merge branch 'Release_2_8_3_Branch' of https://source...
tree
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commitdiff
2015-03-26
tcofoegbu
Modified BioJsHTMLOutputTest to test specific json...
tree
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
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commitdiff
2015-03-25
gmungoc
JAL-1270 System.exit(0) changed to fail() so as not...
tree
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commitdiff
2015-03-18
Charles Ofoegbu
JAL-1668 added PDBDocFieldPreference for configuring...
tree
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commitdiff
2015-03-16
Charles Ofoegbu
JAL-1668 added validation for manual entry of pdb struc...
tree
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commitdiff
2015-03-15
Charles Ofoegbu
JAL-1667 updated test and internationalization messages
tree
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
tree
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commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
tree
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commitdiff
2015-03-06
Jim Procter
Merge commit '6797d65989b01c8fa5bdeaf6a66e35279b66a7f7...
tree
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commitdiff
2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
tree
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commitdiff
2015-02-12
Jim Procter
JAL-1350 forgot to remove empty test
tree
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commitdiff
2015-02-12
Jim Procter
JAL-1350 cloned method and tested equivalence for using...
tree
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commitdiff
2015-01-27
Jim Procter
JAL-674 JAL-1270 added settings to ensure temperature...
tree
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commitdiff
2015-01-26
gmungoc
Merge branch 'features/JAL-1588saveChimeraSession'...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1541 changed assert to JUnit assert - test now...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1628 tweak signature of core annotation printer...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1551 source code formatting
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1628 drop getShowAnnotation accessor in favour...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 new entry point for reading annotation files...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 new method to get a list of insertions in...
tree
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commitdiff
2015-01-18
Jim Procter
always use interface rather than field access
tree
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commitdiff
2015-01-07
Jim Procter
Merge branch 'develop' into JAL-1483_29dev
tree
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commitdiff
2015-01-07
Jim Procter
JAL-1483 basic test of sequence similarity score model...
tree
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commitdiff
2015-01-07
gmungoc
JAL-1588 refactoring to StructureViewerBase and related
tree
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commitdiff
2014-12-28
gmungoc
Merge branch 'features/JAL-1596ChimeraREST' into develop
tree
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commitdiff
2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
tree
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commitdiff
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
tree
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commitdiff
2014-12-14
Jim Procter
JAL-1617 test to verify Uniprot cross-references are...
tree
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commitdiff
2014-12-05
gmungoc
JAL-1609 refactored colour by sequence command, now...
tree
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commitdiff
2014-12-01
Jim Procter
Merge branch 'bug/JAL-1610refAnnotationsInViews' into...
tree
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commitdiff
2014-11-28
gmungoc
JAL-1610 check reference annotations against alignment...
tree
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commitdiff
2014-11-27
Jim Procter
Merge branch 'patchJAL-674_offset' into develop
tree
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commitdiff
2014-11-27
Jim Procter
JAL-674 bug in test
tree
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commitdiff
2014-11-27
Jim Procter
JAL-674 test that PDB annotation created when importing...
tree
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commitdiff
2014-11-27
Jim Procter
JAL-674 patch NPE bug when test run in isolation
tree
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commitdiff
2014-11-27
Jim Procter
JAL-674 fix test properties path and add properties...
tree
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commitdiff
2014-11-25
Charles Ofoegbu
merge commit
tree
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commitdiff
2014-11-25
gmungoc
JFAL-1594 fix Undo bug; enum EditCommand.Action; basic...
tree
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commitdiff
2014-11-23
Jim Procter
Merge branch 'JAL-1569_wuss_vienna_broke' into develop
tree
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commitdiff
2014-11-23
Jim Procter
Merge branch 'JAL-1569_wuss_vienna_broke' into Release_...
tree
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commitdiff
2014-11-23
Jim Procter
JAL-1569 refactoring of stockholm test
tree
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commitdiff
2014-11-23
Jim Procter
JAL-1569 revise tests to count number and type of annot...
tree
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commitdiff
2014-11-19
gmungoc
JAL-1342 new command-line parameter -jabaws <URL>
tree
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commitdiff
2014-11-18
gmungoc
Merge branch 'Release_2_8_2_Branch' of https://source...
tree
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commitdiff
2014-11-18
Jim Procter
Merge branch 'JAL-1587_promotedisorder' into develop
tree
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commitdiff
2014-11-18
Jim Procter
JAL-674 make temperature factor, local secondary struct...
tree
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commitdiff
2014-11-17
gmungoc
JAL-1573 unit test added to verify Help target enum...
tree
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commitdiff
2014-11-14
Charles Ofoegbu
Merge branch 'features/JAL-1541_BioJsMSAViewer-export...
tree
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commitdiff
2014-11-14
Charles Ofoegbu
House keeping
tree
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commitdiff
2014-11-12
Jim Procter
JAL-674 new tests and deprecated tests for PDB mapping...
tree
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commitdiff
2014-11-06
Jim Procter
Merge branch 'features/JAL-1152annotationSorting' into...
tree
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commitdiff
2014-11-04
gmungoc
JAL-1152 annotation sort algorithm optimisation
tree
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commitdiff
2014-11-04
Jim Procter
JAL-1213 test to ensure JMol extracted sequences are...
tree
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commitdiff
2014-11-03
Jim Procter
Merge branch 'develop' into features/JAL-1152annotation...
tree
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commitdiff
2014-11-03
Jim Procter
JAL-1578 test property accessors/copy constructor
tree
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commitdiff
2014-11-03
Jim Procter
JAL-674 peptide structure input so test is not dependen...
tree
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commitdiff
2014-10-31
gmungoc
JAL-1152 bug fix for 'no sort' case + tests for autocal...
tree
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commitdiff
2014-10-31
gmungoc
JAL-1152 menu tweaks plus new option to put Autocalc...
tree
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commitdiff
2014-10-31
Jim Procter
JAL-674 JAL-961 pass row reference to handler to check...
tree
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commitdiff
2014-10-30
Jim Procter
Merge branch 'develop' into features/ssFromPDBEntry
tree
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commitdiff
2014-10-30
Jim Procter
JAL-674 count number of annotation transferred in test
tree
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commitdiff
2014-10-30
gmungoc
JAL-1152 with sticky annotation sort order that updates...
tree
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commitdiff
2014-10-30
Jim Procter
JAL-674 patch test to verify presence of annotation...
tree
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commitdiff
2014-10-30
gmungoc
JAL-1152 prototype of new Annotations menu with sort...
tree
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commitdiff
2014-10-29
Jim Procter
JAL-1264 JAL-674 test to exercise the AlignmentAnnotati...
tree
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commitdiff
2014-10-28
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2014-10-28
gmungoc
JAL-1264 refactor to add menu options to _both_ sequenc...
tree
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commitdiff
2014-10-27
Charles Ofoegbu
Patch for redundancy removal
tree
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commitdiff
2014-10-23
Jim Procter
Merge branch 'hotfix/JAL-1521' into Release_2_8_2_Branch
tree
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commitdiff
2014-10-23
Jim Procter
Merge branch 'hotfix/JAL-1521' into develop
tree
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commitdiff
2014-10-23
Jim Procter
JAL-1521 test to check registry is returning sources
tree
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commitdiff
2014-10-23
gmungoc
JAL-1264 new unit tests
tree
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commitdiff
2014-10-23
gmungoc
JAL-1264 further refactoring and tests
tree
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commitdiff
2014-10-21
Jim Procter
JAL-674 methods and test for PDB derived annotation...
tree
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commitdiff
2014-10-21
Jim Procter
JAL-674 test for the test for presence of annotation...
tree
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commitdiff
2014-10-21
Jim Procter
JAL-1551 formatting
tree
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commitdiff
2014-10-21
Jim Procter
JAL-674 test for duplicate alignment annotation rows...
tree
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commitdiff
2014-10-21
Jim Procter
JAL-674 test to ensure sequence and annotation on seque...
tree
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commitdiff
2014-10-21
Jim Procter
JAL-1551 crlf changes
tree
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commitdiff
2014-10-16
Jim Procter
Merge branch 'feature/JAL-674_dssp' into features/JAL...
features/JAL-1264_showHideAnnotations
tree
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commitdiff
2014-10-15
Jim Procter
JAL-1551 crlf changes due to checkout with text=auto
tree
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commitdiff
2014-10-15
Jim Procter
JAL-1551 crlf changes due to checkout with text=auto
tree
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commitdiff
2014-10-15
Jim Procter
JAL-674 JAL-1305 JAL-348 new liftOver method and test...
tree
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commitdiff
2014-10-13
gmungoc
JAL-1264 unneeded setup removed
tree
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commitdiff
2014-10-13
gmungoc
JAL-1264 unit test corrected
tree
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commitdiff
2014-10-10
Jim Procter
JAL-674 employ new signature in Annotate3D service...
tree
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commitdiff
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