Merge branch 'develop' into features/JAL-2446NCList
[jalview.git] / test /
2017-04-19 gmungocJAL-2480 cache min-max score values per sequence and...
2017-04-19 gmungocJAL-2483 use SequenceFeatures to look up groups, types...
2017-04-18 gmungocJAL-2480 subtract from total length on deleting feature
2017-04-18 gmungocJAL-2480 more test coverage
2017-04-18 gmungocJAL-2480 test coverage / bug fixes / javadoc
2017-04-18 gmungocJAL-2480 SequenceFeaturesI encapsulates features api
2017-04-17 gmungocJAL-2446 promote Range from test to src to replace...
2017-04-17 gmungocJAL-2446 tidied up / generalised binary search in Featu...
2017-04-17 gmungocJAL-2446 add call to SequenceFeatures.delete(); use...
2017-04-12 gmungocJAL-2446 getGroups, getFeatures for positional/non...
2017-04-11 gmungocJAL-2446 find feature types for one or more groups...
2017-04-11 gmungocJAL-2446 getFeatureTypesForGroup() added
2017-04-11 gmungocJAL-2446 added getFeatureGroups
2017-04-10 gmungocJAL-2446 SequenceFeatures.hasFeatures() added
2017-04-10 gmungocJAL-2446 FeatureStore.isEmpty() added
2017-04-07 gmungocJAL-2446 fix size maintenance during add
2017-04-07 gmungocJAL-2446 added delete/contains to pseudo-random tests...
2017-04-06 gmungocJAL-2446 added contains, delete, checks for inclusion...
2017-04-06 gmungocJAL-2446 pseudo-random test of findOverlaps, bug fix...
2017-04-05 gmungocJAL-2446 various get and find methods added with test...
2017-04-04 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-04-03 gmungocJAL-2314 made non-test method non-public bug/JAL-2314
2017-04-03 gmungocMerge branch 'develop' into bug/JAL-2314
2017-04-03 gmungocJAL-2446 pseudo-random generator unit test, and fixes...
2017-03-31 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-03-31 gmungocJAL-2405 additional checks for circular reference in...
2017-03-31 gmungocJAL-2472 PrivilegedAccessor added
2017-03-31 gmungocJAL-2430 code tidy, unit test for Jmol hidden column...
2017-03-30 gmungocJAL-2346 JAL-1933 test updated to include Occupancy
2017-03-30 gmungocJAL-2346 always run setup! bug/JAL-2346annotationChoice
2017-03-30 gmungocJAL-2346 more test coverage for AnnotationColourGradient
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice
2017-03-24 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-03-24 kiramtJAL-2314 Fixes to DisorderAnnotExportImport test
2017-03-23 kiramtJAL-2388 unit test initialisation fix for running full...
2017-03-23 kiramtJAL-2314 Tweaks to stop thread sync issues
2017-03-23 kiramtJAL-2314 Re-annotated unit tests using Jws2Discoverer
2017-03-22 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-03-22 kiramtMerge remote-tracking branch 'origin/develop' into
2017-03-22 gmungocJAL-2311 suppress autocalc'd annotation to isolate...
2017-03-21 kiramtJAL-2307 Fixed SiftsClient unit test
2017-03-21 gmungocJAL-2306 assert no DAS sources
2017-03-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-653_JAL-1766_htslib_refseqsupport
2017-03-21 gmungocJAL-2243 update discovered features on opening structur...
2017-03-21 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into...
2017-03-20 gmungocJAL-2446 FeatureStore with NCList - work in progress
2017-03-20 Jim ProcterMerge branch 'bug/JAL-2421overviewboxflicker' into...
2017-03-17 kiramtJAL-2388 ViewportRanges unit test
2017-03-17 kiramtJAL-2437 Synchronization corrections and unit tests
2017-03-17 kiramtJAL-2388 Renamed column and row subtraction functions
2017-03-16 kiramtJAL-2388 Applied ViewportRanges to code
2017-03-16 kiramtJAL-2388 Renamed viewport position props to viewport...
2017-03-16 kiramtJAL-2388 Unit test update
2017-03-15 kiramtJAL-2388 Unit tests and tidies
2017-03-15 gmungocJAL-2443 push getResidueBoxColour inside getResidueColour
2017-03-15 gmungocJAL-2438 handle null FeatureRenderer in FeatureColourFinder
2017-03-15 gmungocJAL-2438 refactored checks for 'no features displayed'
2017-03-14 kiramtJAL-2388 New hidden cols/seqs functions to support...
2017-03-14 gmungocJAL-2438 unit test, fixes, Javadoc updates
2017-03-14 gmungocJAL-2438 unit tests for FeatureColourFinder (transparen...
2017-03-13 gmungocJAL-2438 FeatureColourFinder refactored from FeatureRen...
2017-03-10 kiramtJAL-2437 Fixed reordering of sequences when hiding...
2017-03-10 kiramtJAL-2388 Moving some alignment panel logic into overvie...
2017-03-09 kiramtJAL-2388 Minor fix for annotation graph, removed unit...
2017-03-08 gmungocJAL-2430 colour columns hidden in alignment gray on...
2017-03-07 kiramtJAL-2388 Fixed inherited&new out-by-one errors; further...
2017-03-07 gmungocJAL-2295 status messages for Chimera attributes set...
2017-03-07 kiramtJAL-2388 Additional unit tests
2017-03-07 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-03-07 kiramtJAL-2429 findColumnPosition returns 0 for cols in regio...
2017-03-07 kiramtJAL-2429 Additional fix to ColumnSelection when hidden...
2017-03-06 kiramtJAL-2388 Remove OverviewDimensions dependency on gui...
2017-03-06 kiramtJAL-2388 Corrected overview panel behaviour, updated...
2017-03-03 kiramtJAL-2429 Fix to ColumnSelection::findColumnPosition
2017-03-03 kiramtJAL-2388 Initial removal of hidden cols/seqs out of...
2017-03-01 gmungocJAL-1264 smarter way to skip autocalc'd annotations...
2017-03-01 gmungocMerge branch 'features/JAL-2295setChimeraAttributes...
2017-02-28 kiramtJAL-2388 Removing sources of non-determinism in unit...
2017-02-27 kiramtJAL-2388 Minor refactoring
2017-02-27 kiramtJAL-2388 Unit tests take 2
2017-02-23 kiramtJAL-2388 Unit tests for columns, take 1
2017-02-23 kiramtJAL-2388 Unit tests in progress
2017-02-21 kiramtMerge branch 'bug/JAL-2421overviewboxflicker' into
2017-02-21 kiramtMerge branch 'develop' into features/JAL-2388OverviewWindow
2017-02-21 kiramtJAL-2421 Unit test
2017-02-20 Jim ProcterMerge branch 'features/JAL-2379pcaMemory' into develop
2017-02-17 kiramtJAL-2388 Incomplete unit tests
2017-02-17 kiramtJAL-2421 incomplete unit test
2017-02-17 kiramtJAL-2421 Fix to alignment panel scroll values, and...
2017-02-15 Jim ProcterJAL-2374 tests for SequenceGroup.contains
2017-02-15 Jim ProcterJAL-2374 JAL-1270 assign SequenceGroup tests to ‘Functi...
2017-02-14 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice
2017-02-09 Jim ProcterMerge branch 'develop' into features/JAL-2316 features/JAL-2316
2017-02-09 gmungocJAL-2371 no test for lower case consensus as not expect...
2017-02-09 gmungocMerge branch 'develop' into features/JAL-2379pcaMemory features/JAL-2379pcaMemory
2017-02-09 gmungocJAL-2405 check for circular reference in SequenceGroup...
2017-02-09 gmungocJAL-2405 set initial selection group alignment context
2017-02-08 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-02-07 gmungocJAL-2397 PCA gap cost uses last column of score matrix
2017-02-06 gmungocJAL-2379 computePairwiseScores() moved to ScoreMatrix
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