JAL-2077 - reinstate popups on osx
[jalview.git] / test /
2016-01-21 tcofoegbuJAL-1919 basic support for importing and viewing mmCIF...
2016-01-11 gmungocJAL-1989 map hidden column ranges
2016-01-11 gmungocJAL-1989 more unit tests and encapsulation for ColumnSe...
2016-01-08 gmungocJAL-1705 DbSourceProxy properties converted to methods...
2016-01-07 tcofoegbumerge
2016-01-07 tcofoegbuJAL-1479 implemented timestamp based caching of SIFTS...
2016-01-05 gmungocJAL-653 updating 'align as' tests to match latest tweak...
2016-01-05 gmungocMerge remote-tracking branch 'origin/features/JAL-1705_...
2016-01-05 gmungocJAL-1191 check for obsolete term when descriptions...
2015-12-23 gmungocJAL-1191 zipped SO OBO file added to /resources, more...
2015-12-22 gmungocJAL-1191 more test cases
2015-12-22 gmungocJAL-1191 SequenceOntology wrapping/caching SO.OBO via...
2015-12-22 gmungocJAL-653 realise virtual mappings and align when adding...
2015-12-22 gmungocJAL-391 new Calculate options to Reverse, Reverse Compl...
2015-12-22 gmungocJAL-653 AlignedCodonFrame collections changed from...
2015-12-22 gmungocJAL-653 GFF new/refactored helper classes
2015-12-22 gmungocJAL-653 AlignedCodonFrame internal refactor, merge...
2015-12-03 gmungocJAL-653 code tidy / tests for 'realise gff mappings'
2015-12-03 gmungocJAL-653 handle reverse strand mapping in SearchResults...
2015-12-03 gmungocJAL-653 mappings always reside on the dataset alignment...
2015-12-03 gmungocJAL-653 handle reverse strand mappings also
2015-12-03 gmungocJAL-1827 code and comment tidy up
2015-12-02 gmungocJAL-1827 refactored to handle missing residues better
2015-11-30 gmungocJAL-653 test for 'resolving GFF mappings to sequences...
2015-11-30 gmungocJAL-653 (experimental) methods to resolve dummy to...
2015-11-30 gmungocJAL-1270 constructor test added
2015-11-30 gmungocJAL-653 getStrand javadoc/refactor/test
2015-11-30 gmungocJAL-1270 constructor tests added, compiler warnings...
2015-11-30 gmungocJAL-652 further refactoring / tests
2015-11-30 gmungocJAL-652 correct case for test file name
2015-11-30 gmungocJAL-653 MapList constructor merges any contiguous ranges
2015-11-23 gmungocJAL-653 Gff tests moved back in to FeaturesFileTest
2015-11-22 gmungocJAL-653 test for 'groups file' and mixed Jalview/GFF
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or...
2015-11-16 tcofoegbuJAL-1967 JAL-1479 refactored sequence<->structure mappi...
2015-11-13 tcofoegbuJAL-1479 added transfer of residue annotation for SIFTS...
2015-11-11 tcofoegbumerge
2015-11-11 tcofoegbuJAL-1957 JAL-1479 Further optimisation of SIFTs Client... features/JAL-1479_SIFTS-mapping
2015-11-06 gmungocJAL-1946 unit tests (and comments) for PID() function
2015-11-06 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-11-05 tcofoegbuJAL-1479 SiftClient house keeping
2015-11-05 tcofoegbuJAL-1942 JAL-1479 refactored SequenceI.getDBRef/Sequenc...
2015-11-02 tcofoegbuJAL-1955 Uniprot sequence fetcher refactor
2015-10-30 Jim ProcterJAL-1954 formatting
2015-10-28 Jim ProcterJAL-1954 test PFAM import results in AlignmentI.hasVali...
2015-10-28 tcofoegbuJAL-1479 added support for SIFTs mapping output viewing...
2015-10-28 tcofoegbuJAL-1887 JAL-1479 bugfix for incorrect start/end for...
2015-10-28 gmungocJAL-1946 additional unit test cases for PID calculation
2015-10-22 tcofoegbuJAL-1479 added basic support for SIFTs mapping - more...
2015-10-22 gmungocJAL-1932 TrimRegionCommand bug fix, tests and purge...
2015-10-15 Jim ProcterJAL-653 JAL-1766 merge 290b1 - fix erroneous conflicts...
2015-10-15 Jim ProcterMerge branch 'develop' into features/JAL-653_JAL-1766_h...
2015-10-15 Jim ProcterMerge branch 'develop' into features/JAL-1705_ensembl
2015-10-15 tcofoegbuJAL-1479 refactored SequenceI interface - changed getDB...
2015-10-08 Jim ProcterJAL-1894 add licensing
2015-10-08 Jim ProcterJAL-1894 formatting
2015-10-08 Jim ProcterJAL-1894 organise imports
2015-10-05 Jim ProcterMerge branch 'develop' into features/JAL-1912_biojson...
2015-10-05 tcofoegbuJAL-1726 updated test error msg
2015-10-01 tcofoegbuJAL-1912 refactor annotation refsequence assignemnt...
2015-09-28 tcofoegbuJAL-1896 revised implementation to construct a ColourSc...
2015-09-24 gmungocJAL-1905 parse url including & correctly
2015-09-24 gmungocJAL-1904 parse feature file colours on to alignment...
2015-09-24 tcofoegbuJAL-1896 bugfix to enabled Jalview restore clustal...
2015-09-21 gmungocJAL-1152 small change to match revised annotation sorti...
2015-09-18 gmungocJAL-1270 disable test as not really a test and goes...
2015-09-18 Jim ProcterJAL-1270 JAL-1889 move the stevesoft test back into...
2015-09-16 gmungocJAL-1885 small fix to isVersionStringLaterThan plus...
2015-09-14 gmungocJAL-1880 updated mapping tests to ensure they handle...
2015-09-14 gmungocJAL-1270 test added for separatorListToArray
2015-09-14 gmungocJAL-1880 handle sequence offsets properly when mapping...
2015-09-10 Jim ProcterJAL-1645 licencing for new files in test and utils
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-09-09 gmungocJAL-1619 'align protein as cDNA' now leaves unmapped...
2015-09-07 gmungocJAL-1636 translate stop codon as '*', mouseover * as...
2015-09-07 gmungocJAL-1152 check 'autocalculated' not 'null sequenceRef...
2015-09-05 Jim ProcterJAL-1805 move misassigned test from Functional to Network
2015-09-03 tcofoegbumerge
2015-09-03 tcofoegbuJAL-793 use default custom export settings for html...
2015-09-03 gmungocJAL-1828 lookup table to convert MSE to MET when parsin...
2015-09-02 gmungocJAL-1264 test made i18n robust
2015-09-02 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-02 Jim ProcterJAL-1772 non-functional test added. not doing any more...
2015-09-02 gmungocJAL-1673 new test to verify transferRESNUMFeatures()
2015-09-02 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-01 Jim ProcterJAL-1853 add test to Functional group
2015-09-01 Jim ProcterJAL-1853 test origin of gapChar bug in AlignView method
2015-09-01 Jim ProcterJAL-1853 test demonstrating bug
2015-09-01 gmungocJAL-1672 additional assertions added
2015-08-27 gmungocJAL-1270 comments added regarding required remote service
2015-08-27 gmungocJAL-1759 updated unit test for removal of trim on Atom...
2015-08-27 gmungocJAL-1830 tests relocated to AlignViewportTest after...
2015-08-27 gmungocJAL-1627 updated expected tooltip text in unit test
2015-08-27 gmungocJAL-1830 unit tests for removing (or not) mappings...
2015-08-27 gmungocJAL-1830 refactored so no jalview.gui references from...
2015-08-26 gmungocJAL-1830 dropped reference counts for mappings, instead...
2015-08-26 gmungocJAL-1270 test separated out of JalviewChimeraView
2015-08-26 gmungocJAL-1270 corrected path to test properties file
2015-08-26 gmungocJAL-1270 separated Jmol and Chimera tests to avoid...
2015-08-26 gmungocJAL-1759 updated unit test for removal of trim of Atom...
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