2017-04-24 |
kiramt | Merge remote-tracking branch |
tree | commitdiff |
2017-04-24 |
kiramt | JAL-2388 Finished split of hidden columns and selected... |
tree | commitdiff |
2017-04-24 |
gmungoc | JAL-2424 final contig now an inclusive range bug/JAL-2424getVisibleContigs |
tree | commitdiff |
2017-04-24 |
tcofoegbu | JAL-1648 added unit test for AppCache |
tree | commitdiff |
2017-04-24 |
kiramt | JAL-2388 Hidden cols separated from column selection... |
tree | commitdiff |
2017-04-21 |
kiramt | JAL-2388 Alignment col and row collections with iterators |
tree | commitdiff |
2017-04-20 |
gmungoc | JAL-2483 JAL-2481 findAllFeatures without scanning... |
tree | commitdiff |
2017-04-19 |
gmungoc | JAL-2480 cache min-max score values per sequence and... |
tree | commitdiff |
2017-04-19 |
kiramt | Merge remote-tracking branch 'origin/develop' into |
tree | commitdiff |
2017-04-19 |
gmungoc | JAL-2483 use SequenceFeatures to look up groups, types... |
tree | commitdiff |
2017-04-18 |
gmungoc | JAL-2480 subtract from total length on deleting feature |
tree | commitdiff |
2017-04-18 |
gmungoc | JAL-2480 more test coverage |
tree | commitdiff |
2017-04-18 |
gmungoc | JAL-2480 test coverage / bug fixes / javadoc |
tree | commitdiff |
2017-04-18 |
gmungoc | JAL-2480 SequenceFeaturesI encapsulates features api |
tree | commitdiff |
2017-04-17 |
gmungoc | JAL-2446 promote Range from test to src to replace... |
tree | commitdiff |
2017-04-17 |
gmungoc | JAL-2446 tidied up / generalised binary search in Featu... |
tree | commitdiff |
2017-04-17 |
gmungoc | JAL-2446 add call to SequenceFeatures.delete(); use... |
tree | commitdiff |
2017-04-12 |
gmungoc | JAL-2403 ensure array held in Matrix is immutable |
tree | commitdiff |
2017-04-12 |
gmungoc | JAL-2446 getGroups, getFeatures for positional/non... |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2446 find feature types for one or more groups... |
tree | commitdiff |
2017-04-11 |
kiramt | JAL-2479 Moved some network-dependent unit tests into... bug/JAL-2479unitteststoNetworkGroup |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2403 improved ScoreModelI hierarchy as per Kira... |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2446 getFeatureTypesForGroup() added |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2446 added getFeatureGroups |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2403 unit tests for PCA.computeSimilarity, signatur... |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2416 test updated for reinstatement of '*' row... |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2446 SequenceFeatures.hasFeatures() added |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2446 FeatureStore.isEmpty() added |
tree | commitdiff |
2017-04-07 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-04-07 |
gmungoc | JAL-2446 fix size maintenance during add |
tree | commitdiff |
2017-04-07 |
gmungoc | JAL-2446 added delete/contains to pseudo-random tests... |
tree | commitdiff |
2017-04-06 |
gmungoc | JAL-2446 added contains, delete, checks for inclusion... |
tree | commitdiff |
2017-04-06 |
gmungoc | JAL-2446 pseudo-random test of findOverlaps, bug fix... |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2446 various get and find methods added with test... |
tree | commitdiff |
2017-04-04 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-04-03 |
gmungoc | JAL-2314 made non-test method non-public bug/JAL-2314 |
tree | commitdiff |
2017-04-03 |
tcofoegbu | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2017-04-03 |
gmungoc | Merge branch 'develop' into bug/JAL-2314 |
tree | commitdiff |
2017-04-03 |
gmungoc | JAL-2446 pseudo-random generator unit test, and fixes... |
tree | commitdiff |
2017-03-31 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-03-31 |
gmungoc | JAL-2405 additional checks for circular reference in... |
tree | commitdiff |
2017-03-31 |
gmungoc | JAL-2472 PrivilegedAccessor added |
tree | commitdiff |
2017-03-31 |
gmungoc | JAL-2430 code tidy, unit test for Jmol hidden column... |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-2346 JAL-1933 test updated to include Occupancy |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-2346 always run setup! bug/JAL-2346annotationChoice |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-2346 more test coverage for AnnotationColourGradient |
tree | commitdiff |
2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice |
tree | commitdiff |
2017-03-29 |
gmungoc | JAL-2416 revert to '*' not '-' in score matrix, handle... |
tree | commitdiff |
2017-03-29 |
kiramt | JAL-2388 New rendering code, extensions to support... |
tree | commitdiff |
2017-03-29 |
kiramt | JAL-2388 New iterators and tests |
tree | commitdiff |
2017-03-28 |
gmungoc | JAL-2403 JAL-2416 pairwise score unexpected symbols... |
tree | commitdiff |
2017-03-28 |
gmungoc | JAL-2403 further test coverage for ScoreMatrix, min... |
tree | commitdiff |
2017-03-28 |
gmungoc | JAL-2416 more test coverage of matrix parser |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 parse score matrices in either NCBI or AAindex... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 tidy up after switch from ' ' to '-' in score... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 score matrix gap symbol (if any) dynamically... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 add score model description field for tooltip... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 use '-' not space for gap in score matrices |
tree | commitdiff |
2017-03-24 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-2428 simplify TreeModel constructors, add getOrigin... |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-2416 tests added for ScoreMatrix |
tree | commitdiff |
2017-03-24 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
tree | commitdiff |
2017-03-24 |
kiramt | JAL-2314 Fixes to DisorderAnnotExportImport test |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-838 move two callers off Comparison.PID and depreca... |
tree | commitdiff |
2017-03-23 |
kiramt | JAL-2388 unit test initialisation fix for running full... |
tree | commitdiff |
2017-03-23 |
kiramt | JAL-2314 Tweaks to stop thread sync issues |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-2397 scale PCA by PID to alignment width to match... |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-2393 updated test for removal of PIDDistanceModel |
tree | commitdiff |
2017-03-23 |
kiramt | JAL-2314 Re-annotated unit tests using Jws2Discoverer |
tree | commitdiff |
2017-03-23 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-03-22 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-03-22 |
kiramt | Merge remote-tracking branch 'origin/develop' into |
tree | commitdiff |
2017-03-22 |
gmungoc | JAL-2311 suppress autocalc'd annotation to isolate... |
tree | commitdiff |
2017-03-21 |
kiramt | JAL-2307 Fixed SiftsClient unit test |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2306 assert no DAS sources |
tree | commitdiff |
2017-03-21 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList features/JAL-653_JAL-1766_htslib_refseqsupport |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2243 update discovered features on opening structur... |
tree | commitdiff |
2017-03-21 |
Jim Procter | Merge branch 'features/JAL-2388OverviewWindow' into... |
tree | commitdiff |
2017-03-20 |
gmungoc | JAL-2446 FeatureStore with NCList - work in progress |
tree | commitdiff |
2017-03-20 |
Jim Procter | Merge branch 'bug/JAL-2421overviewboxflicker' into... |
tree | commitdiff |
2017-03-17 |
kiramt | JAL-2388 ViewportRanges unit test |
tree | commitdiff |
2017-03-17 |
kiramt | JAL-2437 Synchronization corrections and unit tests |
tree | commitdiff |
2017-03-17 |
kiramt | JAL-2388 Renamed column and row subtraction functions |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2388 Applied ViewportRanges to code |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2388 Renamed viewport position props to viewport... |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2388 Unit test update |
tree | commitdiff |
2017-03-15 |
kiramt | JAL-2388 Unit tests and tidies |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2443 push getResidueBoxColour inside getResidueColour |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2438 handle null FeatureRenderer in FeatureColourFinder |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2438 refactored checks for 'no features displayed' |
tree | commitdiff |
2017-03-14 |
kiramt | JAL-2388 New hidden cols/seqs functions to support... |
tree | commitdiff |
2017-03-14 |
gmungoc | JAL-2438 unit test, fixes, Javadoc updates |
tree | commitdiff |
2017-03-14 |
gmungoc | JAL-2438 unit tests for FeatureColourFinder (transparen... |
tree | commitdiff |
2017-03-13 |
gmungoc | JAL-2438 FeatureColourFinder refactored from FeatureRen... |
tree | commitdiff |
2017-03-10 |
kiramt | JAL-2437 Fixed reordering of sequences when hiding... |
tree | commitdiff |
2017-03-10 |
kiramt | JAL-2388 Moving some alignment panel logic into overvie... |
tree | commitdiff |
2017-03-09 |
kiramt | JAL-2388 Minor fix for annotation graph, removed unit... |
tree | commitdiff |
2017-03-08 |
gmungoc | JAL-2430 colour columns hidden in alignment gray on... |
tree | commitdiff |
2017-03-07 |
kiramt | JAL-2388 Fixed inherited&new out-by-one errors; further... |
tree | commitdiff |
2017-03-07 |
gmungoc | JAL-2295 status messages for Chimera attributes set... |
tree | commitdiff |
next |