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amwaterhouse [Wed, 1 Dec 2004 17:11:29 +0000 (17:11 +0000)]
rendergaps(boolean) function added
amwaterhouse [Wed, 1 Dec 2004 17:09:14 +0000 (17:09 +0000)]
showInternalInputDialog
amwaterhouse [Wed, 1 Dec 2004 17:07:45 +0000 (17:07 +0000)]
Dont render gaps in overview panel
amwaterhouse [Wed, 1 Dec 2004 17:07:08 +0000 (17:07 +0000)]
Brackets moved
amwaterhouse [Wed, 1 Dec 2004 17:06:42 +0000 (17:06 +0000)]
Find routine added
amwaterhouse [Wed, 1 Dec 2004 17:06:15 +0000 (17:06 +0000)]
Char to string comparison
amwaterhouse [Wed, 1 Dec 2004 17:05:31 +0000 (17:05 +0000)]
Gapchar is a char, not string
amwaterhouse [Wed, 1 Dec 2004 17:04:57 +0000 (17:04 +0000)]
Set gap chararcter replaces all existing gap chars
amwaterhouse [Wed, 1 Dec 2004 17:04:03 +0000 (17:04 +0000)]
Modified output to reduce HTML file size
amwaterhouse [Wed, 1 Dec 2004 17:03:29 +0000 (17:03 +0000)]
Find added to edit menu
amwaterhouse [Wed, 1 Dec 2004 17:03:12 +0000 (17:03 +0000)]
New class
amwaterhouse [Wed, 1 Dec 2004 16:57:56 +0000 (16:57 +0000)]
New function to highlight text search results
amwaterhouse [Wed, 1 Dec 2004 16:57:15 +0000 (16:57 +0000)]
New classes
amwaterhouse [Wed, 1 Dec 2004 16:56:32 +0000 (16:56 +0000)]
Space changes
amwaterhouse [Mon, 22 Nov 2004 09:42:18 +0000 (09:42 +0000)]
About info updated
amwaterhouse [Fri, 19 Nov 2004 17:24:11 +0000 (17:24 +0000)]
set display boxes must be applied to groups
amwaterhouse [Fri, 19 Nov 2004 17:23:44 +0000 (17:23 +0000)]
printing now uses printer fonts
amwaterhouse [Fri, 19 Nov 2004 17:23:16 +0000 (17:23 +0000)]
if sequence is in selection when removed, remove from av.selection
amwaterhouse [Fri, 19 Nov 2004 17:22:47 +0000 (17:22 +0000)]
doesn't create an image for drawing, important for printing
amwaterhouse [Fri, 19 Nov 2004 17:21:46 +0000 (17:21 +0000)]
checks for new selection before adding a new group
amwaterhouse [Fri, 19 Nov 2004 17:21:14 +0000 (17:21 +0000)]
returns color.white if residueBoxColour is null
amwaterhouse [Fri, 19 Nov 2004 17:20:25 +0000 (17:20 +0000)]
Moved colour text menu
amwaterhouse [Thu, 18 Nov 2004 18:47:34 +0000 (18:47 +0000)]
not used at present
amwaterhouse [Thu, 18 Nov 2004 18:43:47 +0000 (18:43 +0000)]
New files
amwaterhouse [Thu, 18 Nov 2004 18:42:27 +0000 (18:42 +0000)]
space removed
amwaterhouse [Thu, 18 Nov 2004 18:42:01 +0000 (18:42 +0000)]
print menu item added
amwaterhouse [Thu, 18 Nov 2004 18:41:36 +0000 (18:41 +0000)]
setcolour in seqpanel now needs to know about conservation
amwaterhouse [Thu, 18 Nov 2004 18:41:08 +0000 (18:41 +0000)]
allow for printing
amwaterhouse [Thu, 18 Nov 2004 18:40:41 +0000 (18:40 +0000)]
try out graphics 2d
amwaterhouse [Thu, 18 Nov 2004 18:39:09 +0000 (18:39 +0000)]
remove import of analysis
amwaterhouse [Thu, 18 Nov 2004 18:38:43 +0000 (18:38 +0000)]
printing added
amwaterhouse [Thu, 18 Nov 2004 18:38:30 +0000 (18:38 +0000)]
allow printing and 3d viewer
amwaterhouse [Thu, 18 Nov 2004 18:37:45 +0000 (18:37 +0000)]
updates
amwaterhouse [Thu, 18 Nov 2004 18:36:43 +0000 (18:36 +0000)]
make variable public
amwaterhouse [Tue, 16 Nov 2004 15:27:45 +0000 (15:27 +0000)]
remove jbgui import
amwaterhouse [Tue, 16 Nov 2004 15:27:20 +0000 (15:27 +0000)]
remove system.out
amwaterhouse [Tue, 16 Nov 2004 15:27:06 +0000 (15:27 +0000)]
Add only colours that currently work
amwaterhouse [Tue, 16 Nov 2004 15:26:19 +0000 (15:26 +0000)]
new file
amwaterhouse [Tue, 16 Nov 2004 15:25:50 +0000 (15:25 +0000)]
change names of space filling panel
amwaterhouse [Tue, 16 Nov 2004 15:25:14 +0000 (15:25 +0000)]
ConservationColour added
amwaterhouse [Tue, 16 Nov 2004 15:24:50 +0000 (15:24 +0000)]
New files
amwaterhouse [Tue, 16 Nov 2004 15:24:21 +0000 (15:24 +0000)]
add fix if colour is white
amwaterhouse [Tue, 16 Nov 2004 15:23:45 +0000 (15:23 +0000)]
Remove viewport from constructor
amwaterhouse [Tue, 16 Nov 2004 15:22:09 +0000 (15:22 +0000)]
Make sure we're talking about the same alignment!
amwaterhouse [Tue, 16 Nov 2004 15:21:03 +0000 (15:21 +0000)]
No need for viewport or colourtext in renderer
amwaterhouse [Tue, 16 Nov 2004 15:18:05 +0000 (15:18 +0000)]
Initial size of overview
amwaterhouse [Tue, 16 Nov 2004 15:17:27 +0000 (15:17 +0000)]
Halfway to wrapalignment,
amwaterhouse [Tue, 16 Nov 2004 15:17:07 +0000 (15:17 +0000)]
Halfway to wrapalignment, shows swissprot file
amwaterhouse [Tue, 16 Nov 2004 15:16:41 +0000 (15:16 +0000)]
New Class
amwaterhouse [Tue, 16 Nov 2004 15:16:28 +0000 (15:16 +0000)]
New class
amwaterhouse [Tue, 16 Nov 2004 15:16:17 +0000 (15:16 +0000)]
Show all hydrophobic residues
amwaterhouse [Tue, 16 Nov 2004 15:15:56 +0000 (15:15 +0000)]
halfway to wrap alignment
amwaterhouse [Tue, 16 Nov 2004 15:15:22 +0000 (15:15 +0000)]
Conservation colour in place
amwaterhouse [Tue, 16 Nov 2004 15:14:22 +0000 (15:14 +0000)]
now has a name
amwaterhouse [Tue, 16 Nov 2004 15:13:43 +0000 (15:13 +0000)]
initial colour of sequence is black
amwaterhouse [Tue, 16 Nov 2004 15:13:05 +0000 (15:13 +0000)]
SequenceGroup may have name
amwaterhouse [Tue, 16 Nov 2004 15:12:05 +0000 (15:12 +0000)]
don't use setdefaultlookandfeeldecorated, its buggy
amwaterhouse [Tue, 16 Nov 2004 15:11:27 +0000 (15:11 +0000)]
Removed spaces
amwaterhouse [Thu, 4 Nov 2004 18:04:18 +0000 (18:04 +0000)]
Adds sequence number to status bar
amwaterhouse [Thu, 4 Nov 2004 18:03:44 +0000 (18:03 +0000)]
Comment out all PID and frequency calcs for the moment
amwaterhouse [Thu, 4 Nov 2004 18:00:13 +0000 (18:00 +0000)]
Move drawing out of repaint method
amwaterhouse [Thu, 4 Nov 2004 17:58:04 +0000 (17:58 +0000)]
Only 4 or more sequences allowed for PCA
amwaterhouse [Thu, 4 Nov 2004 17:56:21 +0000 (17:56 +0000)]
White space change
amwaterhouse [Thu, 4 Nov 2004 17:55:51 +0000 (17:55 +0000)]
Allowed for addition of OverviewPanel
amwaterhouse [Thu, 4 Nov 2004 17:55:13 +0000 (17:55 +0000)]
OverviewPanel added
amwaterhouse [Thu, 4 Nov 2004 17:54:38 +0000 (17:54 +0000)]
Added OverviewPanel
amwaterhouse [Thu, 4 Nov 2004 17:53:49 +0000 (17:53 +0000)]
Text changes on labels
amwaterhouse [Thu, 4 Nov 2004 17:51:21 +0000 (17:51 +0000)]
removed import jbgui line
amwaterhouse [Tue, 2 Nov 2004 16:12:02 +0000 (16:12 +0000)]
PaintRefresher called after tree selection made
amwaterhouse [Tue, 2 Nov 2004 16:11:21 +0000 (16:11 +0000)]
Allow colouring of ids from tree selected groups
amwaterhouse [Tue, 2 Nov 2004 10:46:54 +0000 (10:46 +0000)]
Jalview Imported Sources
git://source.jalview.org / jalview.git / log