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Merge branch 'task/JAL-1794_jettyExamplesServer' into develop
2015-07-23
Jim Procter
Merge branch 'task/JAL-1794_jettyExamplesServer' into...
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2015-07-23
Jim Procter
Merge branch 'bug/JAL-1819_isNaN' into develop
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2015-07-23
Jim Procter
JAL-1819 commented out debugging message to stderr
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2015-07-23
Jim Procter
JAL-1551 JAL-1819 formatting/imports
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2015-07-23
Jim Procter
JAL-1819 use Float.isNaN() to check for NaNs!
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2015-07-22
Jim Procter
JAL-1805 add group spec to the BeforeMethod setup ...
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2015-07-22
Jim Procter
JAL-1782 added summary test report for Release_2_9_Branch...
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2015-07-21
Jim Procter
Merge branch 'ismb/2015_demo' into develop
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2015-07-16
Jim Procter
revision for JAL-1749 - ensure view 2D structure menu...
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2015-07-16
Jim Procter
fix for JAL-1776 renamed popup menu entry
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2015-06-25
Jim Procter
JAL-1794 simple file server class - configured for...
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2015-06-25
Jim Procter
JAL-1691 avoid NPE when original split frame has been...
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2015-06-25
Jim Procter
JAL-1780 JAL-653 JAL-1892 brackets in wrong place broke...
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2015-06-24
Jim Procter
Merge branch 'features/JAL-1370_patchshowunconserved...
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2015-06-24
Jim Procter
JAL-1790 fix: javac.source=1.7 and javac.target=1.7...
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2015-06-24
Jim Procter
JAL-653 JAL-1780 JAL-1892 fix jalviewLite compilation
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2015-06-24
Jim Procter
Merge branch 'merge/develop_JAL-1780_JAL-653_JAL-1892...
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2015-06-23
Jim Procter
JAL-1780 JAL-653 jim forgot to put the conditional...
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2015-06-23
Jim Procter
JAL-1782 JAL-1780 JAL-653 JAL-1892 update patched refactored...
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2015-06-22
Jim Procter
JAL-1270 fix logic in stockholm test allowing annotation...
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2015-06-22
Jim Procter
JAL-653 JAL-1780 JAL-1140 added RNAML example alignment...
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2015-06-22
Jim Procter
JAL-653 JAL-1780 dropped unnecessary refs
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2015-06-22
Jim Procter
JAL-1780 JAL-653 Format/AppletFormat import and export...
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2015-06-22
Jim Procter
JAL-653 JAL-1780 reorder imports
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2015-06-19
Jim Procter
JAL-653 JAL-1780 refactor getGroups so HTMLfile/JSONfile...
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2015-06-19
Jim Procter
JAL-1780 JAL-653 organise imports
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2015-06-19
Jim Procter
JAL-653 JAL-1780 minimise call rate now av.hasHiddenRows...
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2015-06-19
Jim Procter
JAL-653 JAL-1780 dropped av.setHasHiddenRows() and...
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2015-06-19
Jim Procter
JAL-1780 JAL-653 organise imports
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2015-06-18
Jim Procter
JAL-653 patch broken test code - test still not passing
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2015-06-18
Jim Procter
JAL-653 JAL-1780 JAL-1543 javadoc and comment about...
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2015-06-18
Jim Procter
JAL-653 JAL-1780 javadoc for FeatureRenderer prior...
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2015-06-18
Jim Procter
JAL-1780 JAL-653 moved AlignExportSettings reference...
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2015-06-17
Jim Procter
JAL-1784 minimise data duplication, and report out...
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2015-06-17
Jim Procter
JAL-1784 refactor parse method to directly parse FileParser...
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2015-06-17
Jim Procter
Merge branch 'features/JAL-653_gffalignments' into...
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2015-06-17
Jim Procter
Merge branch 'develop' into features/JAL-653_gffalignments
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2015-06-17
Jim Procter
Merge branch 'develop' into features/JAL-1780_export...
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2015-06-17
Jim Procter
JAL-1783 add java 1.7 and 1.8 class numbers
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2015-06-17
Jim Procter
Merge branch 'develop' into features/JAL-1780_export...
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2015-06-15
Jim Procter
Merge branch 'bug/JAL-1775' into develop
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2015-06-15
Jim Procter
JAL-1665 patch for regression: failing jalview.ws.jabaws...
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2015-06-15
Jim Procter
JAL-1775 patch for regression from Anne Menard’s pseudo...
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2015-06-15
Jim Procter
Merge branch 'bug/JAL-1775' into develop
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2015-06-15
Jim Procter
JAL-1775 patch regression bug when displayChar is null...
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2015-06-15
Jim Procter
Merge branch 'bug/JAL-1775' into develop
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2015-06-15
Jim Procter
fix for JAL-1775 (and reorganise imports)
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2015-06-15
Jim Procter
Merge branch 'bug/JAL-1775' into develop
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2015-06-15
Jim Procter
JAL-1775 test demonstrating bug
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2015-06-15
Jim Procter
JAL-1775 FileLoader javadoc
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2015-06-15
Jim Procter
JAL-1775 fix regression from commit 70f9c4700f20a8fa57ed7eb9...
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2015-06-15
Jim Procter
Merge branch 'develop' into bug/JAL-1775
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2015-06-15
Jim Procter
JAL-1775 fix broken test due to missing file (RF0031_unfolded).
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2015-06-10
Jim Procter
JAL-1764 add structure view type attribute to project...
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2015-06-07
Jim Procter
JAL-429 remove pointless code from phylip parser
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2015-06-07
Jim Procter
JAL-653 test for GFF file recognition and alignment...
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2015-06-07
Jim Procter
JAL-653 GFF recognition for identifyFile and format...
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2015-06-07
Jim Procter
JAL-653 basic GFF3 alignment import wrapper class
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2015-06-06
Jim Procter
JAL-653 make sure dummy sequences created during GFF...
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2015-06-06
Jim Procter
JAL-653 first stab at parsing GFF3 pragmas to support...
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2015-06-06
Jim Procter
JAL-653 gff version number field
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2015-06-06
Jim Procter
JAL-653 test and testdata for importing GFF3 file with...
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2015-06-06
Jim Procter
JAL-653 missing imports after rebase
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2015-06-06
Jim Procter
JAL-653 test for SequenceDummy methods
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2015-06-06
Jim Procter
JAL-653 allow a dummy sequence to take on attributes...
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2015-06-05
Jim Procter
Merge branch 'develop' into features/JAL-653_gffalignments
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2015-06-05
Jim Procter
JAL-653 abstract sequence model to support file backed...
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2015-06-01
Jim Procter
JAL-1370 group and alignment reference sequences are...
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2015-05-29
Jim Procter
Merge branch 'JAL-1755_npe_groupconsensus' into develop
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2015-05-29
Jim Procter
JAL-1755 fix for NPE when setting up temporary variables
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2015-05-07
Jim Procter
JAL-1731 fix JPred4 citation in legacy client code
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2015-05-07
Jim Procter
JAL-1551 formatting
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2015-05-07
Jim Procter
JAL-1601 migrated the JABAWS 2.1 jpred burial representation...
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2015-04-27
Jim Procter
JAL-1645 Release_2_9 branch build tag
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2015-03-09
Jim Procter
Merge branch 'features/JAL-1565_jpred4' into Release_2_8_3_B...
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2015-03-09
Jim Procter
JAL-1565 loading a concise file causes insertions to...
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2015-03-06
Jim Procter
JAL-1683 bump version for r2.8.3 branch
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2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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2015-03-06
Jim Procter
reassign features already created/documented for 2...
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2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
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2015-03-06
Jim Procter
Merge commit '6797d65989b01c8fa5bdeaf6a66e35279b66a7f7...
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2015-03-05
Jim Procter
JAL-1678 fix replace token for launchApp in a buildwq
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2015-03-05
Jim Procter
JAL-1678 fix replace token for launchApp in a buildwq
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2015-03-05
Jim Procter
JAL-1213 JAL-1395 add Jmol to JalviewLite classpath...
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2015-03-05
Jim Procter
JAL-1678 add version parameter to example files in...
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2015-03-05
Jim Procter
JAL-1678 add version parameter to example files in...
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2015-03-05
Jim Procter
Merge branch 'bug/JAL-1643_File-chooser-improvement...
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2015-03-05
Jim Procter
JAL-1643 add quaqua libs as OSX specific resources
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2015-02-27
Jim Procter
Merge branch 'bug/addcustomlaunchdesktopparams' into...
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2015-02-27
Jim Procter
JAL-1678 - patch to make sure we only compare positions...
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2015-02-27
Jim Procter
fix for JAL-1678
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2015-02-12
Jim Procter
JAL-1350 added to 2.9 release notes
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2015-02-12
Jim Procter
JAL-1350 document changed behaviour
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2015-02-12
Jim Procter
JAL-1350 forgot to remove empty test
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2015-02-12
Jim Procter
JAL-1350 pass the columnselection rather then selected...
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2015-02-12
Jim Procter
JAL-1350 cloned method and tested equivalence for using...
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2015-02-12
Jim Procter
JAL-1115 switch to lists in SequenceGroup
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2015-02-12
Jim Procter
JAL-1115 typecast
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2015-02-12
Jim Procter
javadoc
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2015-02-12
Jim Procter
JAL-1115 List rather than vector for sequence groups...
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