| 2016-11-07 |
gmungoc | JAL-2295 (unoptimised) write Jalview features as Chimera...
|
commit | commitdiff | tree |
| 2016-11-03 |
gmungoc | JAL-2295 step 1 new menu item to transfer Jalview attributes...
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-2301 table formatted, and corrected to match the...
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 JAL-1854 encapsulate 'magic number' threshold...
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 ProfileI interface for Profile
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 test updated for percentage rounded
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 Profile and ResidueCount moved from analysis...
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 wording "negatively conserved" now "absence...
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | Conservation now using ResidueCount; tests added
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | JAL-98 use Integer constants; tests added for propHash...
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | JAL-98 typo in javadoc
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | JAL-98 simplified repeat() method
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
|
commit | commitdiff | tree |
| 2016-10-31 |
gmungoc | JAL-98 round when formatting dec places
|
commit | commitdiff | tree |
| 2016-10-27 |
gmungoc | JAL-2282 test assertions for 'other' dbsource
|
commit | commitdiff | tree |
| 2016-10-27 |
gmungoc | JAL-98 refactor bleachColour() to ColorUtils
|
commit | commitdiff | tree |
| 2016-10-27 |
gmungoc | JAL-2287 treat Escape like Cancel in dialog box
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | JAL-2287 Cancel option on Close Chimera? dialog
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | Merge branch 'bug/JAL-98consensusMemory' into develop
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | JAL-2286 modal residue check + commenting
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | JAL-98 null reference to globalColourScheme as it has...
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | JAL-2286 javadoc, refactor, unit tests for threshold...
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-2286 use constant for fixed colours
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 javadoc corrected
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 javadoc added
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 minor fixes to / tests for annotation derivation
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 field comments updated
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 small efficiency fix + commenting
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 javadoc / comments updated
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-98 fixme comment removed - nothing to do
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-98 ResidueCount 100% test coverage (and bug fixes!)
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-2272 Cmd-drag to group edit sequences on Mac (Ctrl...
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-2283 corrected preferences settings for test
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | Merge branch 'develop' into bug/JAL-98consensusMemory
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-2283 set 'by conservation' correctly when changing...
|
commit | commitdiff | tree |
| 2016-10-14 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into task...
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-2253 2 second timeout on ping URL, default 5 minutes...
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into develop
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-1479 revise warning message to suit all contexts
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-2044 increase Jmol file load timeout from 5 to...
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-2044 ensure AAStructureBindingModel.pdbEntry has...
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-2044 include model name in progress bar message...
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into develop
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | JAL-2241 check for null jprovider when processing New...
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into develop
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | JAL-1479 small tidy of error message when Sifts mapping...
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | JAL-2233 reverted changes to Jmol logging levels
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | JAL-2254 map error text in root node of EMBL XML response
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | Merge branch 'develop' into bug/JAL-98consensusMemory
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | Merge branch 'develop' into task/JAL-2196pdbeProperties
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | JAL-2252 now buffered read of 3 lines of a time in...
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | JAL-2245 checks for null added (in case EMBL fetch...
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | Merge branch 'develop' into task/JAL-2196pdbeProperties
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 revert to using SequenceOntologyLite due to...
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 configure full SO for desktop, SOLite for...
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-2245 defence against NullPointer if no EMBL data...
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 use full SO in desktop application
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-2105 update Ensembl REST version to 4.7
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 refined warning message
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 added mRNA isA transcript to SequenceOntologyLite...
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | Merge branch 'bug/JAL-2245enaXmlChange' into develop
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | Merge branch 'bug/JAL-2210_hack_for_Release_2_10' into...
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | JAL-2245 Castor mapping and code changes for change...
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | JAL-2232 some fix / partial fix of failing tests
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | JAL-2232 added test that failed before last fix, passes...
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | JAL-2232 JAL-2154 update dbrefs to newly created dataset...
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-2110 javadoc formatting only
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-2110 JAL-1705 handle not found (400) better
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-2110 additional tests for setDatasetSequence, javadoc...
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-98 throw exception (unhandled) for int overthrow...
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-98 use Profile to store consensus, ResidueCount...
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-98 bespoke fast percentage formatter for consensus...
|
commit | commitdiff | tree |
| 2016-09-30 |
gmungoc | Merge branch 'develop' into bug/JAL-98consensusMemory
|
commit | commitdiff | tree |
| 2016-09-30 |
gmungoc | JAL-2236 code restored (and some compiler warnings...
|
commit | commitdiff | tree |
| 2016-09-30 |
gmungoc | Merge branch 'develop' into features/JAL-1856dbRefFetcherMes...
|
commit | commitdiff | tree |
| 2016-09-30 |
gmungoc | JAL-2234 FER1_ARATH renamed FER2_ARATH and vice versa
|
commit | commitdiff | tree |
| 2016-09-30 |
gmungoc | JAL-2236 fixes for desktop and applet implementation...
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-1856 better warning messages for sequence matching...
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-2213 code warnings addressed (typed collections...
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-2213 removed PDB from db sources list; also code...
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-2213 made RESNUM constant private (not used elsewhere...
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-2213 corrected wait for files to load in Jmol;...
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-2237 apply default filter as sort in initial search
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-2047 allow title to be shrunk; spelling fix
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-1544 typo
|
commit | commitdiff | tree |
| 2016-09-29 |
gmungoc | JAL-1903 increase REST reply timeout from 5 to 15 seconds
|
commit | commitdiff | tree |
| 2016-09-27 |
gmungoc | JAL-2233 less verbose logging for Jmol
|
commit | commitdiff | tree |
| 2016-09-27 |
gmungoc | JAL-2231 save preferred scroll height _without_ progress...
|
commit | commitdiff | tree |
| 2016-09-27 |
gmungoc | JAL-2230 JAL-2049 added sequence feature transfer to
|
commit | commitdiff | tree |
| 2016-09-27 |
gmungoc | JAL-2230 use correct mapping to transfer features to...
|
commit | commitdiff | tree |
| 2016-09-26 |
gmungoc | JAL-98 bug fix, string optimisation, sorted AA properties
|
commit | commitdiff | tree |
| 2016-09-26 |
gmungoc | JAL-98 don't include gaps in maxResidue!
|
commit | commitdiff | tree |
| 2016-09-26 |
gmungoc | JAL-98 generalised increment() to add() and made faster
|
commit | commitdiff | tree |
| 2016-09-23 |
gmungoc | JAL-98 performance tweaks to use of SparseIntArray
|
commit | commitdiff | tree |
| 2016-09-23 |
gmungoc | JAL-98 first working version
|
commit | commitdiff | tree |
| 2016-09-23 |
gmungoc | JAL-2214 Javadoc
|
commit | commitdiff | tree |
| 2016-09-23 |
gmungoc | JAL-98 use SparseIntArray (wip)
|
commit | commitdiff | tree |
| 2016-09-23 |
gmungoc | JAL-98 Android SparseIntArray added
|
commit | commitdiff | tree |
| 2016-09-22 |
gmungoc | JAL-1421 use declared type of ResidueProperties.propHash
|
commit | commitdiff | tree |
| next |
git://source.jalview.org / jalview.git / search