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JAL-3289 Ehancements to ARCHIVE building and script to show how to batch build and...
2018-05-07 gmungocJAL-1767 unit test for save and restore PCA
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2018-05-07 gmungocJAL-1767 scheme DoubleMatrix type includes D and E...
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2018-05-07 gmungocJAL-2982 use configured background colour in PCA image...
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2018-05-07 gmungocJAL-1767 JAL-2647 hide 'Input Data..' for PCA loaded...
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2018-05-07 gmungocJAL-1767 save PCA D and E vectors instead of 'details...
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2018-05-04 gmungocJAL-2906 small tweaks to release notes
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2018-05-04 gmungocJAL-2975 Shift-arrow keys to rotate PCA incrementally
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2018-05-04 gmungocJAL-1767 schema and Castor changes for Save PCA in...
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2018-05-04 gmungocJAL-2965 graduate brightness on z-axis from centre...
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2018-05-04 gmungocJAL-1767 refactorings to enable faithful restore of...
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2018-05-02 gmungocJAL-1767 getters/setters for D and E vectors
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2018-05-01 gmungocJAL-1767 include d and e vectors in Matrix.copy()
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2018-04-30 gmungocJAL-2965 graduated sequence point colour from back...
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2018-04-27 gmungocJAL-2964 tree@linkToAllViews attribute added to project...
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2018-04-27 gmungocJAL-2963 correctly dim PCA points with negative z-coordinates
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2018-04-27 gmungocJAL-1767 refactoring and tidying of RotatableCanvas...
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2018-04-26 gmungocJAL-2962 start on help updates
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2018-04-26 gmungocJAL-2962 rename run method (as not a Runnable)
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2018-04-26 gmungocJAL-2962 remove Change Parameters menu from PCA panel
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2018-04-26 gmungocJAL-2962 option to offer BLOSUM62 for nucleotide PCA
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2018-04-26 gmungocJAL-2962 code tidying/documentation (non-functional...
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2018-04-25 gmungocJAL-1767 minor field tidying prior to functional changes
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2018-04-24 gmungocJAL-2959 no Print dialog shown if Page Format is Cancelled
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2018-04-23 gmungocJAL-2954 more efficient SearchResults.markColumns
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2018-04-23 gmungocJAL-2952 set negative TempFactor values as AlignmentAnnotati...
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2018-04-18 gmungocMerge branch 'releases/Release_2_10_4_Branch' into...
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2018-04-18 gmungocJAL-2593 render 'duplicate' features if transparency...
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2018-04-13 gmungocMerge branch 'features/JAL-2944_openStructuresInSelectedView...
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2018-04-12 gmungocJAL-2223 don't add duplicate mappings to StructureSelectionM...
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2018-04-12 gmungocJAL-1847 minor post-review updates
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2018-04-12 gmungocJAL-2944 tidies for review comments
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2018-03-22 gmungocJAL-914 singleton HelpBroker to avoid multiple help...
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2018-03-22 gmungocJAL-2929 unit test, tidy unused/unneeded fields/parameters
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2018-03-21 gmungocJAL-2929 use configure Overview gap colour instead...
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2018-03-21 gmungocJAL-2754 renamed proguard.jar to include version number
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2018-03-21 gmungocJAL-2754 5.3.3 update of proguard.jar
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2018-03-21 gmungocJAL-2754 update to specify Java 1.8(+)
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2018-03-21 gmungocJAL-2754 update to Java 1.8
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2018-03-19 gmungocJAL-2620 edited long name for size
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2018-03-19 gmungocJAL-2620 parse genetic code tables from standard file...
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2018-03-16 gmungocJAL-2620 alternative genetic code translation tables
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2018-03-16 gmungocJAL-2679 getGeneId() now uses the same pattern as getGeneLoc...
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2018-03-16 gmungocMerge remote-tracking branch 'origin/releases/Release_2_10_4...
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2018-03-16 gmungocJAL-2922 update FeatureRenderer and repaint feature...
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2018-03-16 gmungocMerge branch 'bug/JAL-2865removeGC' into develop
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2018-03-15 gmungocJAL-2893 enabling Get Crossreferences to ENSEMBLGENOMES
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2018-03-14 gmungocJAL-2893 include ENSEMBLGENOMES as a 'roundtrip db...
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2018-03-14 gmungocJAL-2679 reinstating changes lost in VCF merge
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2018-03-14 gmungocJAL-2679 reinstating changes lost in VCF merge
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2018-03-14 gmungocJAL-2933 pass viewport in Finder constructor, find...
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2018-03-14 gmungocJAL-2933 gui and applet Finder hold a FinderI per viewport
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2018-03-14 gmungocJAL-2839 refactored out getNextVisibleSequenceRegion
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2018-03-13 gmungocJAL-2913 use FIGURE_FIXEDIDWIDTH (not FIGURE_USERIDWIDTH)
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2018-03-13 gmungocJAL-2839 additional test case
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2018-03-13 gmungocJAL-2839 refactored analysis.Finder and tests
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2018-03-13 gmungocJAL-2839 addResult ignores duplicates
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2018-03-12 gmungocJAL-2933 remember Find position per viewport
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2018-03-12 gmungocJAL-2839 don't search minimised panels from Finder
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2018-03-09 gmungocJAL-2839 Finder refactoring prior to fixing the defect
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2018-03-08 gmungocMerge remote-tracking branch 'origin/releases/Release_2_10_4...
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2018-03-08 gmungocJAL-2885 tests updated for code changes
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2018-03-08 gmungocJAL-2930 use MouseWheelEvent.getPreciseWheelRotation...
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2018-03-07 gmungocMerge branch 'bugs/JAL-2922' into releases/Release_2_10_4_Branch
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2018-03-07 gmungocJAL-2922 [2] not [1] for Boolean column of table
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2018-03-07 gmungocMerge branch 'bugs/JAL-2922' into releases/Release_2_10_4_Branch
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2018-03-07 gmungocJAL-2922 i18n and bespoke handler for Invert Selection
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2018-03-07 gmungocMerge branch 'bug/JAL-2924nullTooltip' into releases...
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2018-03-07 gmungocJAL-2926 fix copy group consensus (and paste sequence...
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2018-03-07 gmungocJAL-2925 handle empty annotation when copying group...
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2018-03-07 gmungocJAL-2913 use FIGURE_USERIDWIDTH for fixed id width...
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2018-02-28 gmungocJAL-2924 no tooltip over null annotation positions
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2018-02-20 gmungocJAL-2897 updated unit test for code change
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2018-02-20 gmungocMerge branch 'develop' into features/JAL-1793VCF
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2018-02-09 gmungocJAL-2789 avoid using transcript (with no UTR) as CDS...
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2018-02-09 gmungocJAL-2789 code format changes only (before functional...
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2018-02-09 gmungocJAL-2666 fix failure to scroll split alignment of height 1
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2018-02-08 gmungocJAL-2666 basic initial fix for split screen scroll bug
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2018-02-07 gmungocJAL-2808 ensure pattern field re-enabled when needed...
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2018-02-05 gmungocJAL-2897 more informative description on synonymous...
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2018-02-05 gmungocJAL-2897 more informative description on synonymous...
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2018-02-05 gmungocMerge branch 'spikes/mungo' into trialMerge
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2018-02-05 gmungocJAL-2897 more informative description on synonymous...
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2018-02-02 gmungocJAL-984 merged to spikes-mungo
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2018-02-02 gmungocMerge branch 'feature/JAL-984splitAdjuster' into features...
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2018-02-02 gmungocJAL-2899 asynchronous Jmol colour updates
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2018-02-02 gmungocJAL-984 use cursor for drag regions to adjust annotation...
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2018-02-02 gmungocJAL-984 better behaved panel height adjuster
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2018-02-01 gmungocJAL-2899 update structure and overview on slider drag...
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2018-01-31 gmungocJAL-2792 added tooltip to menu items in case of truncation
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2018-01-30 gmungocJAL-2069 menu item now "Variable colour..." to hint...
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2018-01-30 gmungocJAL-1793 update spike build to latest incl stop and...
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2018-01-30 gmungocJAL-2898 show 'stop_gained' variants on peptide sequences
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2018-01-30 gmungocJAL-2897 generate peptide variants for synonymous codon...
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2018-01-30 gmungocJAL-2897 formatting change only prior to functional...
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2018-01-29 gmungocMerge branch 'feature/JAL-2759' of https://source.jalview...
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2018-01-29 gmungocJAL-1270 testPadGaps() added
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2018-01-29 gmungocJAL-2743 recoded EnsemblLookup without lambda expressions...
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2018-01-26 gmungocMerge branch 'develop' into features/JAL-1793VCF
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2018-01-18 gmungocJAL-2810 JAL-2886 i18n
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2018-01-18 gmungocJAL-2679 update query id to actual case of retrieved...
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