| 2005-04-18 |
amwaterhouse | setendres -1
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | position of bioinformatics
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | set PNG antialiasing on
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | show sliders when first selecting conservation,PID
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | dont drag beyond end of alignment
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | selected group draws last residue
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | repaint removed
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | fastPaint modified incase scroll is more than page...
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | calls fontChanged
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | fontChanged method added, componentListener removed
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commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | make sure we draw last line of wrapped alignment
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commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | allow for final line of alignment
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commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | fix wrap alignment vscroll visible amount
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commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | check if colourscheme is null
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commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | AlignPanel RefreshPanels put into paintComponent
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | clustalx exception in colourchange
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | no longer used
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | consensus held in residueColour
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | no need to send consensus
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | takes on methods previously in desktop
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | no need to send consensus everytime
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | pid and conservation changes
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | adjust annotation panel height when font changed
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | pid and conservation slider moved to sliderPanel
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | fontmetrics must be obtained after font change
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | draw graph label lower down
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | public vconsensus available for PID and Blosum
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | PID and conservation colouring changes
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commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | conservation & consensus recalc if group changed
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | comment out jnetpropb, h and c
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | not added to the palette layer
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | use 3 as the threshold
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | if image is null, repaint
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | blosum colour now displayed ok
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | use webservice info
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | update status bar with mouse over
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | use webservice info to display web service state
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commit | commitdiff | tree |
| 2005-04-14 |
amwaterhouse | new class
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | sortByTreeMenu added
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | use AlignFrame.NEW_WINDOW_WIDTH
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | getTree method added
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | if not active tree, colour threshold grey
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | use NEW_WINDOW_WIDTH
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | invalidate alignPanel before changing size
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | new constructor for addtodesktop, sliders set to top...
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | draws last residue
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | repainting issues fixed
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commit | commitdiff | tree |
| 2005-04-13 |
amwaterhouse | treeMenuItem added, conservation sliders, finder top...
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | try out spinning logo
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | return from painting if size is 0
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | Printing wrapped alignment corrected
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | Display of wrapped search results corrected
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | endREs -1
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | conservation changed to quality
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | clear the last area in fast paint
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | scale above, left right added
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | bug adding null sequence to selection fixed
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | reads fasta files from uniprot web page
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commit | commitdiff | tree |
| 2005-04-08 |
amwaterhouse | scale above, left rigt added
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | no more group editor
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | check annotation label widths as well as id widths
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | calls repaint, not just refreshpanels
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | for now, draw selection box bottom -1
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | seals selection box if at bottom of alignment
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | draws threshold position according to threshold, not...
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | no longer used
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | Remove paintFlag ref
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | GRPAH_HEIGHT variable
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | checkfor gap characters
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | paintFlag removed
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | fastPaint flag added
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | reomve call to repaint
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | find top and bottom of group
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | add note about desktopManager
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | add fastPaint boolean
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | remove setdecorated line
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commit | commitdiff | tree |
| 2005-04-07 |
amwaterhouse | amino acid gifs
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | dont draw first block if colour is null
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | fill in the gaps
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | setDesktopManager(new)
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | paint is now in drawComponent
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | showAnnotation added
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | annoation in print version
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | DONT SHOW ANNOTATIONS IF WRAPPED
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | mosueOver graph gives int, not float
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commit | commitdiff | tree |
| 2005-04-06 |
amwaterhouse | Fast paint method implemented
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | Alignment Annotation added
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | ignore jnetconf
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | parses jpredfile into new alignment annotation
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | update conservation and consensus
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | anti_aliasing on
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | Uses conservation graph
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | testing Graphics2D
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | setMaximizable(false)
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commit | commitdiff | tree |
| 2005-04-01 |
amwaterhouse | Build date determination
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commit | commitdiff | tree |
| 2005-03-24 |
amwaterhouse | fix printing error
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commit | commitdiff | tree |
| 2005-03-23 |
amwaterhouse | new seq selection -1
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commit | commitdiff | tree |
| 2005-03-23 |
amwaterhouse | adjustForRemoveLeft / Right added
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commit | commitdiff | tree |
| 2005-03-23 |
amwaterhouse | works even if col is 1 residue
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commit | commitdiff | tree |
| 2005-03-23 |
amwaterhouse | reads MSF files even if PILEUP is missing
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commit | commitdiff | tree |
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