amino acid gifs

diff --git a/help/html/misc/alachem.gif b/help/html/misc/alachem.gif
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diff --git a/help/html/misc/aminoAcids.html b/help/html/misc/aminoAcids.html
index f1e597a..9e25c35 100755 (executable)
--- a/help/html/misc/aminoAcids.html
+++ b/help/html/misc/aminoAcids.html
@@ -16,150 +16,276 @@ td {
 <div align="center">\r
   <h2><br>\r
   </h2>\r
-  <table WIDTH="441" BORDER ="5" cellpadding="3" BGCOLOR="#FFFFFF">\r
-    <tr>\r
+  <table width="450" BORDER ="5" cellpadding="3" BGCOLOR="#FFFFFF">\r
+    <tr> \r
       <td width="15">A</td>\r
       <td width="25">Ala</td>\r
-      <td width="157">Alanine</td>\r
-      <td width="192">GCT, GCC, GCA, GCG</td>\r
+      <td width="90">Alanine</td>\r
+      <td width="80">aliphatic<br>\r
+        hydrophobic<br>\r
+        neutral </td>\r
+      <td width="43" valign="middle">GCT<br>\r
+        GCC<br>\r
+        GCA<br>\r
+        GCG</td>\r
+      <td width="125"><img src="alachem.gif" width="102" height="61"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>B</td>\r
       <td>&nbsp;</td>\r
       <td>either aspartic acid or asparagine</td>\r
       <td>&nbsp;</td>\r
+      <td>&nbsp;</td>\r
+      <td>&nbsp;</td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>C</td>\r
       <td>Cys</td>\r
       <td>Cysteine</td>\r
-      <td>TGT, TGC</td>\r
+      <td>polar<br>\r
+        hydrophobic<br>\r
+        neutral </td>\r
+      <td>TGT<br>\r
+        TGC</td>\r
+      <td><img src="cyschem.gif" width="102" height="81"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>D</td>\r
       <td>Asp</td>\r
       <td>Aspartic Acid</td>\r
-      <td>GAT, GAC</td>\r
+      <td>polar<br>\r
+        hydrophilic<br>\r
+        charged (-) </td>\r
+      <td>GAT<br>\r
+        GAC</td>\r
+      <td><img src="aspchem.gif" width="102" height="104"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>E</td>\r
       <td>Glu</td>\r
       <td>Glutamic Acid</td>\r
-      <td>GAA, GAG</td>\r
+      <td>polar<br>\r
+        hydrophilic<br>\r
+        charged (-) </td>\r
+      <td>GAA<br>\r
+        GAG</td>\r
+      <td><img src="gluchem.gif" width="102" height="127"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>F</td>\r
       <td>Phe</td>\r
       <td>Phenylalanine</td>\r
-      <td>TTT, TTC</td>\r
+      <td>aromatic<br>\r
+        hydrophobic<br>\r
+        neutral</td>\r
+      <td>TTT<br>\r
+        TTC</td>\r
+      <td><img src="phechem.gif" width="102" height="125"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>G</td>\r
       <td>Gly</td>\r
       <td>Glycine</td>\r
-      <td>GGT, GGC, GGA, GGG</td>\r
+      <td>&nbsp;</td>\r
+      <td>GGT<br>\r
+        GGC<br>\r
+        GGA<br>\r
+        GGG</td>\r
+      <td><img src="glychem.gif" width="102" height="58"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>H</td>\r
       <td>His</td>\r
       <td>Histidine</td>\r
-      <td>CAT, CAC</td>\r
+      <td>aromatic<br>\r
+        polar<br>\r
+        hydrophilic<br>\r
+        charged (+) </td>\r
+      <td>CAT<br>\r
+        CAC</td>\r
+      <td><img src="hischem.gif" width="102" height="116"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>I</td>\r
       <td>Ile</td>\r
       <td>Isoleucine</td>\r
-      <td>ATT, ATC, ATA</td>\r
+      <td>aliphatic<br>\r
+        hydrophobic<br>\r
+        neutral </td>\r
+      <td>ATT<br>\r
+        ATC<br>\r
+        ATA</td>\r
+      <td><img src="ilechem.gif" width="102" height="106"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>K</td>\r
       <td>Lys</td>\r
       <td>Lysine</td>\r
-      <td>AAA, AAG</td>\r
+      <td>&nbsp;</td>\r
+      <td>AAA<br>\r
+        AAG</td>\r
+      <td><img src="lyschem.gif" width="102" height="152"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>L</td>\r
       <td>Leu</td>\r
       <td>Leucine</td>\r
-      <td>TTG, TTA, CTT, CTC, CTA, CTG</td>\r
+      <td>aliphatic<br>\r
+        hydrophobic<br>\r
+        neutral </td>\r
+      <td>TTG<br>\r
+        TTA<br>\r
+        CTT<br>\r
+        CTC<br>\r
+        CTA<br>\r
+        CTG</td>\r
+      <td><img src="leuchem.gif" width="102" height="107"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>M</td>\r
       <td>Met</td>\r
       <td>Methionine</td>\r
+      <td>hydrophobic<br>\r
+        neutral </td>\r
       <td>ATG</td>\r
+      <td><img src="metchem.gif" width="102" height="130"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>N</td>\r
       <td>Asn</td>\r
       <td>Asparagine</td>\r
-      <td>AAT, AAC</td>\r
+      <td>polar<br>\r
+        hydrophilic<br>\r
+        neutral </td>\r
+      <td>AAT<br>\r
+        AAC</td>\r
+      <td><img src="asnchem.gif" width="102" height="106"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>P</td>\r
       <td>Pro</td>\r
       <td>Proline</td>\r
-      <td>CCT, CCC, CCA, CCG</td>\r
+      <td>hydrophobic<br>\r
+        neutral</td>\r
+      <td>CCT<br>\r
+        CCC<br>\r
+        CCA<br>\r
+        CCG</td>\r
+      <td><img src="prochem.gif" width="65" height="93"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>Q</td>\r
       <td>Gln</td>\r
       <td>Glutamine</td>\r
-      <td>CAA, CAG</td>\r
+      <td>polar<br>\r
+        hydrophilic<br>\r
+        neutral</td>\r
+      <td>CAA<br>\r
+        CAG</td>\r
+      <td><img src="gluchem.gif" width="102" height="127"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>R</td>\r
       <td>Arg</td>\r
       <td>Arginine</td>\r
-      <td>CGT, CGC, CGA, CGG, AGA, AGG</td>\r
+      <td>polar<br>\r
+        hydrophilic<br>\r
+        charged (+) </td>\r
+      <td>CGT<br>\r
+        CGC<br>\r
+        CGA<br>\r
+        CGG<br>\r
+        AGA<br>\r
+        AGG</td>\r
+      <td><img src="argchem.gif" width="102" height="175"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>S</td>\r
       <td>Ser</td>\r
       <td>Serine</td>\r
-      <td>TCT, TCC, TCA, TCG, AGT, AGC</td>\r
+      <td>polar<br>\r
+        hydrophilic<br>\r
+        neutral </td>\r
+      <td>TCT<br>\r
+        TCC<br>\r
+        TCA<br>\r
+        TCG<br>\r
+        AGT<br>\r
+        AGC</td>\r
+      <td><img src="serchem.gif" width="102" height="81"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>T</td>\r
       <td>Thr</td>\r
       <td>Threonine</td>\r
-      <td>ACT, ACC, ACA, ACG</td>\r
+      <td>polar<br>\r
+        hydrophilic<br>\r
+        neutral </td>\r
+      <td>ACT<br>\r
+        ACC<br>\r
+        ACA<br>\r
+        ACG</td>\r
+      <td><img src="thrchem.gif" width="102" height="84"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>V</td>\r
       <td>Val</td>\r
       <td>Valine</td>\r
-      <td>GTT, GTC, GTA, GTG</td>\r
+      <td>aliphatic<br>\r
+        hydrophobic<br>\r
+        neutral </td>\r
+      <td>GTT<br>\r
+        GTC<br>\r
+        GTA<br>\r
+        GTG</td>\r
+      <td><img src="valchem.gif" width="102" height="84"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>W</td>\r
       <td>Trp</td>\r
       <td>Tryptophan</td>\r
+      <td>aromatic<br>\r
+        hydrophobic<br>\r
+        neutral</td>\r
       <td>TGG</td>\r
+      <td><img src="trpchem.gif" width="125" height="125"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>X</td>\r
       <td>&nbsp;</td>\r
       <td>UNKNOWN</td>\r
       <td>&nbsp;</td>\r
+      <td>&nbsp;</td>\r
+      <td>&nbsp;</td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>Y</td>\r
       <td>Tyr</td>\r
       <td>Tyrosine</td>\r
-      <td>TAT, TAC</td>\r
+      <td>aromatic<br>\r
+        polar<br>\r
+        hydrophobic </td>\r
+      <td>TAT<br>\r
+        TAC</td>\r
+      <td><img src="tyrchem.gif" width="102" height="149"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>Z</td>\r
       <td>&nbsp;</td>\r
       <td>either glutamic acid or glutamine</td>\r
       <td>&nbsp;</td>\r
+      <td>&nbsp;</td>\r
+      <td><img src="glnchem.gif" width="102" height="130"></td>\r
     </tr>\r
-    <tr>\r
+    <tr> \r
       <td>&nbsp;</td>\r
       <td>End</td>\r
       <td>Terminator</td>\r
-      <td>TAA, TAG, TGA</td>\r
+      <td>&nbsp;</td>\r
+      <td>TAA<br>\r
+        TAG<br>\r
+        TGA</td>\r
+      <td>&nbsp;</td>\r
     </tr>\r
   </table>\r
   <h2><br>\r

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