git://source.jalview.org
/
jalview.git
/ search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
JAL-3187 clunky sort by renderorder in findComplementFeaturesAtResidue
2019-01-22
gmungoc
JAL-3187 clunky sort by renderorder in findComplementFeature...
commit
|
commitdiff
|
tree
2019-01-21
gmungoc
JAL-3187 also repaint complement on change in FeatureTypeSet...
commit
|
commitdiff
|
tree
2019-01-21
gmungoc
JAL-3187 draw complement features on alignment / structure
commit
|
commitdiff
|
tree
2019-01-21
gmungoc
JAL-3187 unit tests updated and errors caught
commit
|
commitdiff
|
tree
2019-01-21
gmungoc
JAL-3187 findFeaturesAtResidue answer in render order...
commit
|
commitdiff
|
tree
2019-01-21
gmungoc
JAL-3187 repaint a 'following' complementary view on...
commit
|
commitdiff
|
tree
2019-01-21
gmungoc
JAL-3187 (hacked up) show complement features on structure...
commit
|
commitdiff
|
tree
2019-01-18
gmungoc
JAL-3187 basic first version for tooltips only (rendering...
commit
|
commitdiff
|
tree
2019-01-14
gmungoc
JAL-3186 remove Variable Colour from popup menu
commit
|
commitdiff
|
tree
2019-01-14
gmungoc
JAL-3186 remove duplicate message keys
commit
|
commitdiff
|
tree
2019-01-14
gmungoc
JAL-2069 wider dialog so all fields show!
commit
|
commitdiff
|
tree
2019-01-14
gmungoc
JAL-2069 clear any error colour when setting threshold...
commit
|
commitdiff
|
tree
2019-01-14
gmungoc
JAL-3125 tidy up
commit
|
commitdiff
|
tree
2019-01-14
gmungoc
JAL-3125 avoid slider 'rounding' threshold field value
commit
|
commitdiff
|
tree
2019-01-03
gmungoc
JAL-1889 additional test for clover-added fields
commit
|
commitdiff
|
tree
2019-01-03
gmungoc
JAL-1889 ignore 'synthetic' fields added for jacoco
commit
|
commitdiff
|
tree
2018-12-21
gmungoc
JAL-1767 minimise local variable scope
commit
|
commitdiff
|
tree
2018-12-19
gmungoc
JAL-2791 JAL-2808 correct Javadoc for api method
commit
|
commitdiff
|
tree
2018-12-19
gmungoc
JAL-3032 ignore /site also on non-JS branches
commit
|
commitdiff
|
tree
2018-12-06
gmungoc
JAL-1854 fix Checkstyle import violations
commit
|
commitdiff
|
tree
2018-12-06
gmungoc
JAL-1854 Checkstyle updated to 8.12
commit
|
commitdiff
|
tree
2018-11-08
gmungoc
JAL-1889 ignore Clover instrumentation in test (second...
commit
|
commitdiff
|
tree
2018-11-08
gmungoc
JAL-1889 unit test tweaks for running on server
commit
|
commitdiff
|
tree
2018-09-28
gmungoc
JAL-3063 service param files read/saved using JAXB...
commit
|
commitdiff
|
tree
2018-09-28
gmungoc
JAL-3063 top level element added to JalviewWsParamSet.xsd
commit
|
commitdiff
|
tree
2018-09-28
gmungoc
JAL-3063 comments re use of xjc to generate Java binding...
commit
|
commitdiff
|
tree
2018-09-24
gmungoc
JAL-3063 tidy commented out code
commit
|
commitdiff
|
tree
2018-09-21
gmungoc
JAL-3063 wrappers with check for null getting optional...
commit
|
commitdiff
|
tree
2018-09-20
gmungoc
JAL-2843 tweaks to help text for filters
commit
|
commitdiff
|
tree
2018-09-20
gmungoc
JAL-2843 help text for colour by attribute, feature...
commit
|
commitdiff
|
tree
2018-09-19
gmungoc
JAL-3120 preserve plain colour value when changing...
commit
|
commitdiff
|
tree
2018-09-19
gmungoc
Merge branch 'develop' of https://source.jalview.org...
commit
|
commitdiff
|
tree
2018-09-19
gmungoc
JAL-2808 JAL-3032 drop tabbed layout for Colours and...
commit
|
commitdiff
|
tree
2018-09-19
gmungoc
JAL-3063 use JAXB for 'Save as Project' and load project...
commit
|
commitdiff
|
tree
2018-09-19
gmungoc
JAL-3063 unit test for save/load project switched to...
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 Save/Load user defined colours using JAXB
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 Save/Load user colour scheme using JAXB
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 top level element added to colours schema...
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 New View via JAXB
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 temporary extra menu option to save/load project...
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 first version of Jalview2XML using JAXB to...
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 JAXB binding classes generated by xjc from...
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 tweak schema so JAXB tool xjc recognises XML...
commit
|
commitdiff
|
tree
2018-09-18
gmungoc
JAL-3063 tweak schema so JAXB generates enums for enumerated...
commit
|
commitdiff
|
tree
2018-09-17
gmungoc
JAL-3116 test method renamed to match code
commit
|
commitdiff
|
tree
2018-09-17
gmungoc
JAL-3116 unit tests adapted to EMBL over JAXB
commit
|
commitdiff
|
tree
2018-09-14
gmungoc
JAL-3116 parse EMBL XML with JAXB (todo: update unit...
commit
|
commitdiff
|
tree
2018-09-13
gmungoc
JAL-3116 Uniprot XML unmarshalled using JAXB not Castor
commit
|
commitdiff
|
tree
2018-09-12
gmungoc
Merge branch 'develop' of https://source.jalview.org...
commit
|
commitdiff
|
tree
2018-09-12
gmungoc
Merge branch 'develop' of https://source.jalview.org...
commit
|
commitdiff
|
tree
2018-09-12
gmungoc
JAL-1551 reinstated Save actions
commit
|
commitdiff
|
tree
2018-09-03
gmungoc
Merge branch 'trialMerge' into releases/Release_2_10_5_Branch
commit
|
commitdiff
|
tree
2018-09-03
gmungoc
JAL-3076 fetch Ensembl sequence as JSON instead of...
commit
|
commitdiff
|
tree
2018-08-31
gmungoc
JAL-3003 remove redundant call to drawSelectionGroup
commit
|
commitdiff
|
tree
2018-08-28
gmungoc
JAL-3059 use correct border colour for groups
commit
|
commitdiff
|
tree
2018-08-28
gmungoc
JAL-3003 draw selection group outline on main graphics...
commit
|
commitdiff
|
tree
2018-08-28
gmungoc
JAL-247 comment to clarify wrapped print algorithm
commit
|
commitdiff
|
tree
2018-08-28
gmungoc
JAL-247 print/export wrapped uses common code to draw...
commit
|
commitdiff
|
tree
2018-08-28
gmungoc
JAL-3087 include full alignment height in repeating...
commit
|
commitdiff
|
tree
2018-08-28
gmungoc
JAL-247 draw/print sequence ids now uses common code...
commit
|
commitdiff
|
tree
2018-08-15
gmungoc
JAL-3080 remove tree partition if no groups created
commit
|
commitdiff
|
tree
2018-08-14
gmungoc
JAL-3078 reset Tree font (only!) on Cancel
commit
|
commitdiff
|
tree
2018-08-10
gmungoc
JAL-3018 updated to Ensembl REST 7.0
commit
|
commitdiff
|
tree
2018-08-10
gmungoc
JAL-3076 refactor for more efficient scan of 'gene...
commit
|
commitdiff
|
tree
2018-08-10
gmungoc
JAL-3076 fetch Ensembl sequence as JSON instead of...
commit
|
commitdiff
|
tree
2018-06-07
gmungoc
JAL-2755 correct Javadoc and error handling
commit
|
commitdiff
|
tree
2018-06-07
gmungoc
JAL-2920 format/comment tidy
commit
|
commitdiff
|
tree
2018-06-07
gmungoc
JAL-2920 wrap description in <html/> if it includes...
commit
|
commitdiff
|
tree
2018-06-07
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' of https...
commit
|
commitdiff
|
tree
2018-06-06
gmungoc
JAL-2920 unit tests for 3 or more original or variant...
commit
|
commitdiff
|
tree
2018-06-06
gmungoc
JAL-3013 ensure Chimera as a symlink gets resolved
commit
|
commitdiff
|
tree
2018-06-04
gmungoc
JAL-2808 update test for revised treatment of 'mixed...
commit
|
commitdiff
|
tree
2018-06-04
gmungoc
JAL-3019 correctly form toRange of 'traversed' MapList
commit
|
commitdiff
|
tree
2018-06-04
gmungoc
JAL-3018 updated REST versions to 6.3
commit
|
commitdiff
|
tree
2018-05-31
gmungoc
JAL-2808 don't capture or report min-max for mixed...
commit
|
commitdiff
|
tree
2018-05-31
gmungoc
JAL-2808 pre-fill numeric inequality filter with min...
commit
|
commitdiff
|
tree
2018-05-28
gmungoc
Merge branch 'bug/JAL-797' into develop
commit
|
commitdiff
|
tree
2018-05-28
gmungoc
Merge remote-tracking branch 'origin/releases/Release_2_10_4...
commit
|
commitdiff
|
tree
2018-05-25
gmungoc
JAL-2992 simpler heuristic for available height
commit
|
commitdiff
|
tree
2018-05-25
gmungoc
JAL-2995 tooltip on fields with double-click to browse...
commit
|
commitdiff
|
tree
2018-05-25
gmungoc
JAL-2994 temporary patch with paths to Chimera for...
commit
|
commitdiff
|
tree
2018-05-24
gmungoc
JAL-2997 additional tests
commit
|
commitdiff
|
tree
2018-05-23
gmungoc
JAL-2993 AlignFrame listen for keystrokes in OverviewPanel
commit
|
commitdiff
|
tree
2018-05-23
gmungoc
JAL-2997 unit test
commit
|
commitdiff
|
tree
2018-05-23
gmungoc
JAL-2997 handle tab-delimited trailing column number...
commit
|
commitdiff
|
tree
2018-05-21
gmungoc
JAL-797 Cmd-W act WHEN_IN_FOCUSED_WINDOW
commit
|
commitdiff
|
tree
2018-05-21
gmungoc
JAL-2920 use HGVS notation for protein variant feature
commit
|
commitdiff
|
tree
2018-05-11
gmungoc
JAL-2986 corrected findIndex for out of range residue...
commit
|
commitdiff
|
tree
2018-05-11
gmungoc
JAL-2986 additional asserts for SequenceCursor updates
commit
|
commitdiff
|
tree
2018-05-11
gmungoc
JAL-2986 failing test added
commit
|
commitdiff
|
tree
2018-05-09
gmungoc
JAL-2984 add pdb as sequence(s) if associate structure...
commit
|
commitdiff
|
tree
2018-05-07
gmungoc
JAL-2808 ensure test setUp/tearDown alwaysRun
commit
|
commitdiff
|
tree
2018-05-07
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
commit
|
commitdiff
|
tree
2018-05-07
gmungoc
JAL-1767 unit test for save and restore PCA
commit
|
commitdiff
|
tree
2018-05-07
gmungoc
JAL-1767 scheme DoubleMatrix type includes D and E...
commit
|
commitdiff
|
tree
2018-05-07
gmungoc
JAL-2982 use configured background colour in PCA image...
commit
|
commitdiff
|
tree
2018-05-07
gmungoc
JAL-1767 JAL-2647 hide 'Input Data..' for PCA loaded...
commit
|
commitdiff
|
tree
2018-05-07
gmungoc
JAL-1767 save PCA D and E vectors instead of 'details...
commit
|
commitdiff
|
tree
2018-05-04
gmungoc
JAL-2906 small tweaks to release notes
commit
|
commitdiff
|
tree
2018-05-04
gmungoc
JAL-2975 Shift-arrow keys to rotate PCA incrementally
commit
|
commitdiff
|
tree
next