| 2007-01-29 |
amwaterhouse | Tooltips for group names, descriptions
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commit | commitdiff | tree |
| 2007-01-29 |
amwaterhouse | Description added
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commit | commitdiff | tree |
| 2007-01-29 |
amwaterhouse | SequenceGroup parsing added to annotation file
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commit | commitdiff | tree |
| 2007-01-29 |
amwaterhouse | ID_ITALICS option in preferences
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commit | commitdiff | tree |
| 2007-01-29 |
amwaterhouse | scaleAbove, left and right set when tab selection changes
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commit | commitdiff | tree |
| 2007-01-29 |
amwaterhouse | Marios annotation bug fixed
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commit | commitdiff | tree |
| 2007-01-26 |
amwaterhouse | AnnotationId is hashcode of object
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commit | commitdiff | tree |
| 2007-01-26 |
amwaterhouse | Only set the sequence oncecvs diff datamodel/Alignment...
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commit | commitdiff | tree |
| 2007-01-26 |
amwaterhouse | Adjusts annotations for sequence edits
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commit | commitdiff | tree |
| 2007-01-26 |
amwaterhouse | If its null, set tip empty
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | Command takes alignment, not gapChar
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | Annotations move when full alignment edited
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | Annotation adjustment moved to EditCommand
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | Remove unneccessary lines
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | AlignmentAnnotations require id
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | Allow for hidden columns
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | Only output visible annotations
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | load/get Annotation
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | Remove unnecessary line
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | Output annotations
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commit | commitdiff | tree |
| 2007-01-25 |
amwaterhouse | 1.1 enabled
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commit | commitdiff | tree |
| 2007-01-24 |
amwaterhouse | Conservation etc have autoCalculated flag set true
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commit | commitdiff | tree |
| 2007-01-24 |
amwaterhouse | AdjustAnnotations needs position, number and insert
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commit | commitdiff | tree |
| 2007-01-24 |
amwaterhouse | This constructor is never called
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commit | commitdiff | tree |
| 2007-01-24 |
amwaterhouse | Features output for javascript
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commit | commitdiff | tree |
| 2007-01-24 |
amwaterhouse | output now takes alignment, not just sequences
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commit | commitdiff | tree |
| 2007-01-24 |
amwaterhouse | Extension to fastaFile for myhits
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commit | commitdiff | tree |
| 2007-01-24 |
amwaterhouse | Page setup added
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commit | commitdiff | tree |
| 2007-01-23 |
amwaterhouse | boolean for internal copies
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commit | commitdiff | tree |
| 2007-01-23 |
amwaterhouse | Hidden representatives moved from sequence to viewport
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commit | commitdiff | tree |
| 2007-01-19 |
amwaterhouse | export features/annotations not for import
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commit | commitdiff | tree |
| 2007-01-19 |
amwaterhouse | Applet can output and load annotations, features
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commit | commitdiff | tree |
| 2007-01-19 |
amwaterhouse | Neeed to know protocol for annotation loading
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commit | commitdiff | tree |
| 2007-01-19 |
amwaterhouse | Need to know protocol to load anntotations
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | Add the last sequence before annotations
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | Take scrollOffset into account
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | Tool tip for annotation description
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | Set description on copy
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | Set tooltip
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | 1.1 enabled
|
commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | put vamsas bit back in
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | File Parsing returns Alignments, not Sequence[]
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | Is secondary structure label modified
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | Display description
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commit | commitdiff | tree |
| 2007-01-18 |
amwaterhouse | Descriptions can be added to annotations
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commit | commitdiff | tree |
| 2007-01-17 |
amwaterhouse | Edit name/description added to applet
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commit | commitdiff | tree |
| 2007-01-17 |
amwaterhouse | Fit to Window bug fixed
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commit | commitdiff | tree |
| 2007-01-17 |
amwaterhouse | Dont set the font of alignFrameMenubarcvs update appletgui...
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commit | commitdiff | tree |
| 2007-01-04 |
amwaterhouse | Send new sequences when firing alignment changed
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commit | commitdiff | tree |
| 2007-01-04 |
amwaterhouse | Reads in anything following seq id as a description
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commit | commitdiff | tree |
| 2007-01-04 |
amwaterhouse | HEADER and ATOM must be position 0
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commit | commitdiff | tree |
| 2006-12-21 |
amwaterhouse | check on sequence length
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commit | commitdiff | tree |
| 2006-12-21 |
amwaterhouse | getSequenceAsString
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commit | commitdiff | tree |
| 2006-12-21 |
amwaterhouse | getSequenceAsString
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commit | commitdiff | tree |
| 2006-12-21 |
amwaterhouse | remove unnecessary import
|
commit | commitdiff | tree |
| 2006-12-19 |
amwaterhouse | org.vamsas is now uk.ac.vamsas
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commit | commitdiff | tree |
| 2006-12-19 |
amwaterhouse | description may be null
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commit | commitdiff | tree |
| 2006-12-14 |
amwaterhouse | set sequence_ref alignment
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commit | commitdiff | tree |
| 2006-12-14 |
amwaterhouse | Watch out for - symbol lin jnet files
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commit | commitdiff | tree |
| 2006-12-14 |
amwaterhouse | Are the labels all secondary Strutures? are the displayChars...
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commit | commitdiff | tree |
| 2006-12-14 |
amwaterhouse | one less cast
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commit | commitdiff | tree |
| 2006-12-11 |
amwaterhouse | ensure lastSeq is refreshed if new feature added
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commit | commitdiff | tree |
| 2006-12-07 |
amwaterhouse | set labels null if not being used
|
commit | commitdiff | tree |
| 2006-12-07 |
amwaterhouse | dont add char[] ref to a string
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commit | commitdiff | tree |
| 2006-12-06 |
amwaterhouse | protected ok
|
commit | commitdiff | tree |
| 2006-12-06 |
amwaterhouse | Change text of ok if viewport not null
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commit | commitdiff | tree |
| 2006-12-06 |
amwaterhouse | textfield has focus
|
commit | commitdiff | tree |
| 2006-12-05 |
amwaterhouse | Set startRes 0 for switch to wrap view
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commit | commitdiff | tree |
| 2006-12-05 |
amwaterhouse | sequence is char []
|
commit | commitdiff | tree |
| 2006-12-05 |
amwaterhouse | Sequence is char []
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commit | commitdiff | tree |
| 2006-11-30 |
amwaterhouse | indexOf replaces contains
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commit | commitdiff | tree |
| 2006-11-30 |
amwaterhouse | char array replaces string for cuts
|
commit | commitdiff | tree |
| 2006-11-30 |
amwaterhouse | DasRegistry moved again
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commit | commitdiff | tree |
| 2006-11-30 |
amwaterhouse | sg might be null if mouse released after coloumns removed
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commit | commitdiff | tree |
| 2006-11-30 |
amwaterhouse | Return true or false if file saved
|
commit | commitdiff | tree |
| 2006-11-30 |
amwaterhouse | Warning message if file was not saved, repaint ids...
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commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | version 2.2
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commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | Format changes
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | jpg replaces gif
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | replace with jpg
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | Close strong tag
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | lower case file
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | CurrentColour must not be accessed by multiple sequence...
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | CurrentColour must not be accessed by multiple sequence...
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | Dont change ap font from treePanel
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | Dont change ap font from treePanel
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | Tree title
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | REmove system.out
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | border 1
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | Loads PDB files from jar file, new views can open PDB...
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | No need to create tmpAnnotationPanel every paint
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | Translation should not be adjusted outside annotation...
|
commit | commitdiff | tree |
| 2006-11-28 |
amwaterhouse | off by one group consensus calculation
|
commit | commitdiff | tree |
| 2006-11-27 |
amwaterhouse | Cant save to a URL loaded Jar file
|
commit | commitdiff | tree |
| 2006-11-27 |
amwaterhouse | Cant save to a URL loaded Jar file
|
commit | commitdiff | tree |
| 2006-11-27 |
amwaterhouse | Allow new window from output sequences
|
commit | commitdiff | tree |
| 2006-11-27 |
amwaterhouse | New feature type, new colour set
|
commit | commitdiff | tree |
| 2006-11-27 |
amwaterhouse | Some reason final radioButtons added to ButtonGroups...
|
commit | commitdiff | tree |
| 2006-11-24 |
amwaterhouse | seqColours null
|
commit | commitdiff | tree |
| 2006-11-24 |
amwaterhouse | Fix load 1 col hidden bug
|
commit | commitdiff | tree |
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