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2005-12-09	amwaterhouse	Change order of repaint if wrapped	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Applet Structure viewer has all colours available	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Can be used by PDBViewer	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	All colours added to Structure viewer	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Only load the tree file once, for first alignment	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Keylistener added to frame and seqcanvas	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	If dataset seq exists for paste to existing alignment...	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	Should call deselectAll when escape pressed	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	Dont repaint if component has been removed	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	SeqColoursReady	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	Clustal colour added to table	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	SeqColoursReady boolean added	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	UnknownSequences.remove moved out of loop	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	showAnnotation state loaded	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	null pointer in wrapped mode, click near sequence	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	new help	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	Updated help	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	Revert to version 1.25	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	After merge	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	EqualsignoreCase	commit \| commitdiff \| tree
2005-12-07	amwaterhouse	License added to new files	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	View menu added to TOC	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	Slightly larger	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	Allow for DNA alignments in imgMap	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	Make ImageMap for features as well as groups	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	Add features to dataset	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	Add internalFrameActivated listener	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	After merge	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	Readded	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	hasDistances added	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	After merge	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	after merge	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	after merge	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	After merge	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	After branch merge	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	PDB structure viewer updated	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	Saves features	commit \| commitdiff \| tree
2005-12-06	amwaterhouse	New help files	commit \| commitdiff \| tree
2005-10-07	amwaterhouse	comma separated rgb values	commit \| commitdiff \| tree
2005-10-07	amwaterhouse	getalignment method added	commit \| commitdiff \| tree
2005-10-07	amwaterhouse	Quick fix for reading sequence	commit \| commitdiff \| tree
2005-10-07	amwaterhouse	Select all cutandpaste	commit \| commitdiff \| tree
2005-10-07	amwaterhouse	Don't exit if file not found and not headless	commit \| commitdiff \| tree
2005-10-05	amwaterhouse	Sequence start end added for the time being	commit \| commitdiff \| tree
2005-10-03	amwaterhouse	Remove float width	commit \| commitdiff \| tree
2005-10-03	amwaterhouse	Request focus for new frames	commit \| commitdiff \| tree
2005-10-03	amwaterhouse	Return if no searchString	commit \| commitdiff \| tree
2005-10-03	amwaterhouse	Keylistener added to internalFrame	commit \| commitdiff \| tree
2005-10-03	amwaterhouse	Remove development code	commit \| commitdiff \| tree
2005-10-03	amwaterhouse	Remove redundancy from eclipse	commit \| commitdiff \| tree
2005-09-30	amwaterhouse	Remove redundancy from Eclipse	commit \| commitdiff \| tree
2005-09-30	amwaterhouse	Restore file before eclipse changes	commit \| commitdiff \| tree
2005-09-30	amwaterhouse	Remove redundancy in Eclipse	commit \| commitdiff \| tree
2005-09-29	amwaterhouse	Take into account scroll value	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	use lower case home.png	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	Applet frame name	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	Set frame size each applet	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	Remove latestVersion if null	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	Remove latestVersion if null	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	2.06	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	Put clip back in	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	Change font	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	More features for PCA	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	Wrap alignment with annotations	commit \| commitdiff \| tree
2005-09-28	amwaterhouse	New params	commit \| commitdiff \| tree
2005-09-27	amwaterhouse	Show labels in wrapped view	commit \| commitdiff \| tree
2005-09-23	amwaterhouse	Draw labels, anti alias	commit \| commitdiff \| tree
2005-09-23	amwaterhouse	Capture output as details	commit \| commitdiff \| tree
2005-09-23	amwaterhouse	Right click copy/paste popup	commit \| commitdiff \| tree
2005-09-23	amwaterhouse	Now an InternalFrame with menus	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	SetAnnotationVisible - ignore if wrapped	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	Create Instance of FormatAdapter	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	Dont calculate conservation for nucleotides	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	isNucleotide	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	Create instance of FormatAdapter	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	Add nucleotide names	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	Display nucleotides	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	Break if regex not found	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	If Mac user hasnt selected file format, give warning	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	Wrap alignment with annotations	commit \| commitdiff \| tree
2005-09-22	amwaterhouse	Check if filefilter is null	commit \| commitdiff \| tree
2005-09-21	amwaterhouse	Jalview	commit \| commitdiff \| tree
2005-09-21	amwaterhouse	Sequences must be aligned before PCA	commit \| commitdiff \| tree
2005-09-21	amwaterhouse	Next active Frame losing focus bug fixed	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Use gtk icons	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	GTK icons	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Add carriage return after memory settings	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Checks end of sequence before drawing text	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Format label left align	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Optimise copy image	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	PCAPanel checks viewport selection group	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	PCAPanel checks viewport selection	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	PCAPanel just requires viewport	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Help gets bounds from help map file	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	New methods in treePanel	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Null pointer if user presses shift before anything...	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Align labels format left	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Optimise graphics copy object	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Use selectionGroup to find chosen sequences	commit \| commitdiff \| tree
2005-09-20	amwaterhouse	Make sure fontmetrics is not null	commit \| commitdiff \| tree
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