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2015-08-18	tcofoegbu	JAL-1861 bugfix to allow parsing of stockholm files...	commit \| commitdiff \| tree
2015-08-18	tcofoegbu	JAL-1835 added UI for BioJSON embbeding preference	commit \| commitdiff \| tree
2015-08-18	tcofoegbu	JAL-1835 made BioJSON embedding to html exports configurable...	commit \| commitdiff \| tree
2015-08-18	tcofoegbu	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2015-08-18	tcofoegbu	JAL-1834 added tooltip to the PDB sequence fetcher...	commit \| commitdiff \| tree
2015-08-18	tcofoegbu	JAL-1833 modified tooltip to force wraping of long...	commit \| commitdiff \| tree
2015-08-17	tcofoegbu	merge	commit \| commitdiff \| tree
2015-08-17	tcofoegbu	JAL-1832 improvement to enable result update only when...	commit \| commitdiff \| tree
2015-08-17	tcofoegbu	JAL-1831 update all maxItems annotation to the max...	commit \| commitdiff \| tree
2015-08-14	tcofoegbu	merge	commit \| commitdiff \| tree
2015-08-14	tcofoegbu	JAL-1831 added changes to allow auto-generation of...	commit \| commitdiff \| tree
2015-08-13	tcofoegbu	JAL-1826 bug fix to select pdb sequence fetcher via...	commit \| commitdiff \| tree
2015-08-13	tcofoegbu	JAL-1641 added type to BioJSON sequence object and...	commit \| commitdiff \| tree
2015-08-11	tcofoegbu	JAL-1641 updated json help doc	commit \| commitdiff \| tree
2015-08-11	tcofoegbu	merge	commit \| commitdiff \| tree
2015-08-11	tcofoegbu	add ability to launch jalview from exported html +...	commit \| commitdiff \| tree
2015-08-10	tcofoegbu	JAL-1486 fixed flatfile output of visible region for...	commit \| commitdiff \| tree
2015-08-07	tcofoegbu	JAL-1824 updated caching procedure for pdb entries...	commit \| commitdiff \| tree
2015-08-06	tcofoegbu	merge	commit \| commitdiff \| tree
2015-08-06	tcofoegbu	JAL-1824 corrected copy'n'paste error introduced from...	commit \| commitdiff \| tree
2015-08-04	tcofoegbu	JAL-1816 fixed bug in identify file preventing it from...	commit \| commitdiff \| tree
2015-08-04	tcofoegbu	JAL-1821 updated implementation of launchStructureViewer...	commit \| commitdiff \| tree
2015-08-04	tcofoegbu	updated the reference sequence column of cached structure...	commit \| commitdiff \| tree
2015-08-04	tcofoegbu	JAL-1788 updated biojson docs	commit \| commitdiff \| tree
2015-08-04	tcofoegbu	JAL-1821 updated the reference sequence column of structure...	commit \| commitdiff \| tree
2015-07-30	tcofoegbu	JAL-1443 modified exception notifications	commit \| commitdiff \| tree
2015-07-30	tcofoegbu	JAL-1710 filtered colons(:) from structure chooser...	commit \| commitdiff \| tree
2015-07-29	tcofoegbu	JAL-1821 discarded sequence name truncation in summary...	commit \| commitdiff \| tree
2015-07-23	tcofoegbu	Resolved merge conflict in EdtiCommandTest.java	commit \| commitdiff \| tree
2015-07-23	tcofoegbu	JAL-1805 modified test setup's so the are ran for groups...	commit \| commitdiff \| tree
2015-07-23	tcofoegbu	JAL-1819 Test cases for Identify file	commit \| commitdiff \| tree
2015-07-22	tcofoegbu	JAL-1667 JAL-1668 JAL-1553 help docs update	commit \| commitdiff \| tree
2015-07-21	tcofoegbu	Merge	commit \| commitdiff \| tree
2015-07-21	tcofoegbu	JAL-1443 bugfix to prevent loading of unidentifiable...	commit \| commitdiff \| tree
2015-07-15	tcofoegbu	updated version info in seqfetch.html	commit \| commitdiff \| tree
2015-07-15	tcofoegbu	JAL-1553 reviewed & updated docs	commit \| commitdiff \| tree
2015-07-15	tcofoegbu	JAL-1667 JAL-1668 updated reviewed and updated docs	commit \| commitdiff \| tree
2015-07-15	tcofoegbu	JAL-1788 updated docs	commit \| commitdiff \| tree
2015-07-15	tcofoegbu	JAL-1769 updated test data	commit \| commitdiff \| tree
2015-07-13	tcofoegbu	JAL-1788 added help documentation for biojson	commit \| commitdiff \| tree
2015-07-10	tcofoegbu	JAL-1759 code fix to enable testng ant task compile...	commit \| commitdiff \| tree
2015-07-09	tcofoegbu	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2015-07-09	tcofoegbu	JAL-1769 increased timeout period for eps generation	commit \| commitdiff \| tree
2015-07-09	tcofoegbu	JAL-1806 bug fix to loop through the entire data file...	commit \| commitdiff \| tree
2015-07-09	tcofoegbu	JAL-1769 added test for commandline input operations	commit \| commitdiff \| tree
2015-07-08	tcofoegbu	JAL-1641 biojson documentation with docson	commit \| commitdiff \| tree
2015-07-07	tcofoegbu	JAL-1769 fixed output to jalview (.jpv) file in headless...	commit \| commitdiff \| tree
2015-07-07	tcofoegbu	JAL-1805 test envirionment separation	commit \| commitdiff \| tree
2015-07-06	tcofoegbu	Merge branch 'features/1769_headless-mode-test' into...	commit \| commitdiff \| tree
2015-07-06	tcofoegbu	JAL-1641 added json schema for jalview JSON model,...	commit \| commitdiff \| tree
2015-07-06	tcofoegbu	JAL-1769 fixed headless execution mode and created...	commit \| commitdiff \| tree
2015-07-02	tcofoegbu	Merge branch 'bug/JAL-1443_loading-empty-file' into...	commit \| commitdiff \| tree
2015-07-02	tcofoegbu	JAL-1443 data validation for empty content before loading...	commit \| commitdiff \| tree
2015-07-01	tcofoegbu	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2015-07-01	tcofoegbu	house keeping	commit \| commitdiff \| tree
2015-06-30	tcofoegbu	Merge branch 'features/JAL-1641_JSON-tests-and-docs...	commit \| commitdiff \| tree
2015-06-30	tcofoegbu	JAL-1641 round trip test/refactoring	commit \| commitdiff \| tree
2015-06-26	tcofoegbu	JAL-1641 fixed broken functionalities after refactor	commit \| commitdiff \| tree
2015-06-26	tcofoegbu	merge	commit \| commitdiff \| tree
2015-06-26	tcofoegbu	JAL-1780 improvement to ensure export settings dialog...	commit \| commitdiff \| tree
2015-06-19	tcofoegbu	JAL-1270 test suits import order refactor	commit \| commitdiff \| tree
2015-06-19	tcofoegbu	JAL-1270 JUnit to TestNG refactoring	commit \| commitdiff \| tree
2015-06-17	tcofoegbu	JAL-1780 more support for export setting for flatfile...	commit \| commitdiff \| tree
2015-06-17	tcofoegbu	JAL-1780 Export settings for flatfile output	commit \| commitdiff \| tree
2015-06-15	tcofoegbu	JAL-1641 clean up	commit \| commitdiff \| tree
2015-06-15	tcofoegbu	JAL-1641 docs for ComplexAlignFile interface	commit \| commitdiff \| tree
2015-06-15	tcofoegbu	clean up	commit \| commitdiff \| tree
2015-06-12	tcofoegbu	merge	commit \| commitdiff \| tree
2015-06-12	tcofoegbu	JAL-1627 removed extra spaces at end of tooltip	commit \| commitdiff \| tree
2015-06-12	tcofoegbu	JAL-1641 refactor	commit \| commitdiff \| tree
2015-06-10	tcofoegbu	updated build.xml	commit \| commitdiff \| tree
2015-06-10	tcofoegbu	merge	commit \| commitdiff \| tree
2015-06-10	tcofoegbu	JAL-1641 updated applet version	commit \| commitdiff \| tree
2015-06-09	tcofoegbu	merge commit	commit \| commitdiff \| tree
2015-06-09	tcofoegbu	JAL-1488 bug-fix for incorrect start/end position in...	commit \| commitdiff \| tree
2015-06-05	tcofoegbu	Merge branch 'bug/JAL-1760_restore-hidden-seqs' into...	commit \| commitdiff \| tree
2015-06-05	tcofoegbu	JAL-1760 JAL-1641 Serialisation of Hidden Seqs and...	commit \| commitdiff \| tree
2015-06-04	tcofoegbu	JAL-1641 added some JSON libraries to appletlib	commit \| commitdiff \| tree
2015-06-04	tcofoegbu	clean up	commit \| commitdiff \| tree
2015-06-04	tcofoegbu	JAL-1756 fix failed test as a result of runing the...	commit \| commitdiff \| tree
2015-06-04	tcofoegbu	Merge branch 'features/JAL-1641_JSON-extension' into...	commit \| commitdiff \| tree
2015-06-04	tcofoegbu	JAL-1756 bug-fix	commit \| commitdiff \| tree
2015-06-04	tcofoegbu	JAL-1641 updated json schema to make it more generic...	commit \| commitdiff \| tree
2015-06-02	tcofoegbu	fixed bug in build.xml	commit \| commitdiff \| tree
2015-06-02	tcofoegbu	Merge branch 'features/JAL-1641_JSON-extension' into...	commit \| commitdiff \| tree
2015-06-02	tcofoegbu	JAL-1641 updated build.xml	commit \| commitdiff \| tree
2015-06-02	tcofoegbu	JAL-1641 updated examples/applets.html	commit \| commitdiff \| tree
2015-06-02	tcofoegbu	Merge branch 'features/JAL-1641_JSON-extension' into...	commit \| commitdiff \| tree
2015-06-02	tcofoegbu	JAL-1641 applet build fix	commit \| commitdiff \| tree
2015-06-01	tcofoegbu	Merge branch 'features/JAL-1641_JSON-extension' into...	commit \| commitdiff \| tree
2015-06-01	tcofoegbu	JAL-1641 remove all refs/imports from gui package	commit \| commitdiff \| tree
2015-06-01	tcofoegbu	Merge branch 'bug/JAL-1703_hint_select_by_annot' into...	commit \| commitdiff \| tree
2015-06-01	tcofoegbu	JAL-1703 added tooltip hints to components of the Select...	commit \| commitdiff \| tree
2015-06-01	tcofoegbu	Merge branch 'bug/JAL-1734_misleading-progress-bar...	commit \| commitdiff \| tree
2015-06-01	tcofoegbu	JAL-1734 updated progress bar messages	commit \| commitdiff \| tree
2015-05-29	tcofoegbu	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2015-05-29	tcofoegbu	JAL-1748 house keeping	commit \| commitdiff \| tree
2015-05-29	tcofoegbu	Merge branch 'bug/JAL-1748_extend-pdb-query-opt' into...	commit \| commitdiff \| tree
2015-05-29	tcofoegbu	JAL-1748 and employ preprocessing routine when return...	commit \| commitdiff \| tree
2015-05-29	tcofoegbu	validate PDB selections on mouse release event	commit \| commitdiff \| tree
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