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test HMM annotaTION
2017-05-31 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2017-05-31 tcofoegbuJAL-2375 fix unit test to reflect improvement
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2017-05-31 tcofoegbuFixed failing tests
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2017-05-31 tcofoegbuJAL-2533 updated unit test to reflect improvement
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2017-05-26 tcofoegbuJAL-2465 Improvement to re-instate storing recently...
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2017-05-26 tcofoegbuJAL-2465 fix to prevent files loaded from the system...
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2017-05-15 tcofoegbuJAL-2520 improvement to use URL leaf name for creating...
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2017-05-15 tcofoegbuJAL-2533 improvement to prune off file extension when...
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2017-05-09 tcofoegbuJAL-2520 improvement to download and update structure...
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2017-05-09 tcofoegbuJAL-2520 unit test for improvement to download structure...
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2017-05-09 tcofoegbuJAL-2465 fix to dynamically specify data source type...
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2017-05-08 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2017-05-04 tcofoegbuMerge branch 'features/JAL-2473_set-minimium-dimensions...
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2017-05-04 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2017-05-01 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2017-05-01 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2017-05-01 tcofoegbuJAL-2482 bug fix
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2017-05-01 tcofoegbuJAL-2482 unit test for bug fix
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2017-05-01 tcofoegbuJAL-2465 missed commit for refactore renaming of getPdbFile...
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2017-05-01 tcofoegbuJAL-2465 bugfix and rerefactor renamed getPdbFile(...
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2017-05-01 tcofoegbuJAL-2465 unit test for bugfix
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2017-05-01 tcofoegbuJAL-2376 copied out patch from Phyre branch
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2017-04-25 tcofoegbuJAL-2489 edited unit test code comment
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2017-04-25 tcofoegbuJAL-2489 Unit test for bug
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2017-04-25 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2017-04-25 tcofoegbuJAL-2489 bug fix
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2017-04-21 tcofoegbuJAL-2485 Bug fix to filter out uniprot response header...
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2017-04-19 tcofoegbuJAL-2482 added null check
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2017-04-18 tcofoegbuJAL-2482 Bugfix
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2017-04-11 tcofoegbuPull from develop
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2017-04-11 tcofoegbuJAL-2473 removed unused fields in JalviewDialog
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2017-04-10 tcofoegbuMerge branch 'bug/JAL-2255_seq-fetcher-broken-on-linux...
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2017-04-10 tcofoegbuJAL-2255 Bug fix
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2017-04-10 tcofoegbuMerge branch 'develop' into bug/JAL-2255_seq-fetcher...
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2017-04-10 tcofoegbuJAL-2473 added improvement to apply default / custom...
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2016-11-28 tcofoegbuMerge branch 'features/JAL-2326_JOptionPane-refactoring...
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2016-11-24 tcofoegbuJAL-2326 added setup method for JvOptionPane in all...
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2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane
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2016-11-24 tcofoegbuJAL-2326 added layer of abstraction between Jalview...
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2016-11-22 tcofoegbuMerge branch 'bug/JAL-2277_refactorPrintUnwrapped'...
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2016-11-22 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-11-22 tcofoegbuJAL-2322 added runnable interface to HTMLOutput class...
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2016-11-21 tcofoegbuJAL-2277 bug fix for mis-alligned graphics output for...
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2016-11-21 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-11-21 tcofoegbuJAL-2332 bugfix to enable structure chooser opening...
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2016-11-16 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-11-16 tcofoegbuJAL-2322 JAL-2309 replaced references to isheadless...
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2016-11-14 tcofoegbuJAL-2322 Refactored unified architecture for data ...
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2016-11-11 tcofoegbuJAL-2277 Refactored out duplicated method - printUnwrapped...
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2016-11-10 tcofoegbuMerge branch 'bug/JAL-2317_jmol_chimera-chain-factorisation...
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2016-11-10 tcofoegbuMerge branch 'develop' into bug/JAL-2317_jmol_chimera...
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2016-11-10 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-11-10 tcofoegbuJAL-2317 Fixed Chimera command for hiding/showing distinct...
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2016-11-10 tcofoegbuBugfix to enable accurate chain extraction/association...
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2016-11-08 tcofoegbuJAL-2280 Updated spanish translation as recommended...
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2016-11-08 tcofoegbuJAL-2292 updated method calls
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2016-11-08 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-11-08 tcofoegbuJAL-2292 renamed method and improved implementation...
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2016-11-04 tcofoegbuJAL-2292 squashed bug that breaks feature mapping for...
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2016-11-04 tcofoegbuJAL-2292 added javadoc for compareChar(..) utility...
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2016-11-04 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-11-04 tcofoegbuJAL-2195 JAL-2262 house keeping
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2016-11-04 tcofoegbuJAL-2292 fix for wrong mapping output in sequence mapping...
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2016-11-04 tcofoegbuJAL-2292 Wrote utility method for comparing two char...
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2016-11-04 tcofoegbuJAL-2292 Unit test for utility method for comparing...
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2016-11-03 tcofoegbuJAL-2312 unit test for bug fix - repeated mapping generated...
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2016-11-03 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-11-03 tcofoegbuJAL-2312 Bug fix for repeated mapping generation from...
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2016-11-01 tcofoegbuJAL-2280 refactored and improved structure file identificati...
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2016-10-27 tcofoegbuJAL-2177 Jmol update from: Jmol-14.2.14_2015.06.11...
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2016-10-27 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-10-27 tcofoegbuJAL-2280 Improvement to enable drag'n'drop association...
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2016-10-26 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-10-26 tcofoegbuMerge branch 'features/JAL-2284_export-biojsmsa-via...
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2016-10-26 tcofoegbuJAL-2284 basic support for exporting BioJS MSA viewer...
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2016-10-25 tcofoegbuMerge branch 'bug/JAL-2277_html-output-wrapped-mode...
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2016-10-25 tcofoegbuJAL-2277 Improvement to support html+svg export in...
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2016-10-17 tcofoegbuJAL-2262 JAL-2195 Improvement to set PDBId availability...
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2016-10-12 tcofoegbuJAL-2255 another possible fix
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2016-10-12 tcofoegbuJAL-2255 possible bug fix
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2016-10-11 tcofoegbuMerge branch 'features/JAL-2039_Offer_cached_structurefiles_...
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2016-10-11 tcofoegbuJAL-2039 improvement to offer cached structure view...
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2016-10-10 tcofoegbuMerge branch 'bug/JAL-2262_dnd-for-local-structure...
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2016-10-10 tcofoegbuJAL-2262 JAL-2195 unit test for bug
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2016-10-10 tcofoegbuJAL-2262 JAL-2195 bug fix for mapping local structure...
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2016-10-05 tcofoegbuQQMerge branch 'develop' of https://source.jalview...
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2016-10-05 tcofoegbuJAL-1563 JAL-1479 minor house-keeping for Uniprot FTS...
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2016-09-23 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-09-23 tcofoegbuJAL-2164 JAL-1919 fixed failed revert commit
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2016-09-19 tcofoegbumerge
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2016-09-13 tcofoegbuJAL-2164 JAL-1919 disabled PDB file parser configuration...
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2016-09-13 tcofoegbuRevert "JAL-2164 JAL-1919 disabled and removed PDB...
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2016-09-13 tcofoegbuJAL-2164 JAL-1919 disabled and removed PDB file parser...
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2016-09-13 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-09-13 tcofoegbuJAL-2195 bug fix to enable restoring jmol session save...
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2016-09-09 tcofoegbumerge
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2016-09-08 tcofoegbuJAL-2164 renamed 'DEFAULT_STRUCTURE_FORMAT' property...
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2016-08-31 tcofoegbuJAL-2148 further enhancment to CA HETATM processing
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2016-08-19 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
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2016-08-19 tcofoegbuJAL-1803 unit test for PDB chainCode save/restore from...
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