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help documentation for Jalview 2.7
2011-09-20 jprocterhelp documentation for Jalview 2.7
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2011-09-16 jprocterJAL-747 - made warning message friendlier and more...
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2011-09-16 jprocterfix for JAL-895 - new exampleFile_2_7.jar and logic...
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2011-09-16 jprocternumerically ataxic comments.
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2011-09-16 jprocterJAL-574 added option to enable/disable 'follow selection...
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2011-09-16 jprocterJAL-940 - removed legacy service options from preferences...
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2011-09-16 jprocterJAL-468 typo and label length in dialog
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2011-09-16 jprocterpatch for JAL-935 - warning messages raised when alignment...
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2011-09-16 jprocterJAL-468 JAL-936 sort alignment by tree and autosort...
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2011-09-16 jproctertweak english
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2011-09-15 jprocterdocumentation for new preferences (JAL-234 and web...
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2011-09-15 jprocterdocumentation for JAL-234
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2011-09-15 jprocterJAL-860 fixed grammar for one structure vs many structures...
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2011-09-15 jprocterJAL-854 tweaked menu layout so services appear before...
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2011-09-14 jproctertypo
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2011-09-14 jprocterJAL-234 - default button to reset min/max colours and...
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2011-09-14 jprocterJAL-934 - refactor to use label font functions
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2011-09-14 jprocterJAL-934 - refactor to use label font functions
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2011-09-14 jprocterJAL-934 - standard label font functions
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2011-09-14 jprocterJAL-931 (related) - utility to split an alignment database...
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2011-09-14 jprocterJAL-931 - groovy test harness code.
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2011-09-14 jproctertest data for JAL-701
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2011-09-14 jprocterpatch for NPE (not clear if NPE is evidence of deeper...
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2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
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2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
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2011-09-14 jprocterfix for JAL-930
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2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
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2011-09-12 jprocterJAL-927 ensure api method calls that affect GUI state...
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2011-09-05 jprocternote about ensuring callers of loadAlignment(..) save...
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2011-08-30 jprocterpatch for JAL-731
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2011-08-30 jprocterpatch for JAL-729 - NPE avoided and cut and paste import...
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2011-08-30 jprocterJAL-915 - ensured that exceptions are not raised in...
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2011-08-30 jprocterfix for JAL-917 - ensure all sequence strings are made...
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2011-08-30 jprocterfix for JAL-917 - ensure all sequence strings are made...
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2011-08-30 jprocterJAL-715 - conditional to hide the RSBS service editing...
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2011-08-30 jprocterJAL-715 rsbs service editing
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2011-08-30 jprocterJAL-715 JalviewDialog for RSBS service editing pane
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2011-08-30 jprocterJAL-715 store/reset .jalview_properties setting for...
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2011-08-30 jprocterJAL-715 serialise and deserialise multiple rest client...
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2011-08-30 jprocterJAL-715 - notify user of parsing problems for results...
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2011-08-30 jprocterretrieve URL for datasource of packed set
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2011-08-30 jprocterensure parsing errors and 'lack of data' errors are...
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2011-08-30 jprocterJAL-715 need to URLencode constant values when serializing...
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2011-08-29 jprocterJAL-715 - grammar for warning message.
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2011-08-29 jprocteradded notes on third party library licencing and updated...
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2011-08-29 jprocterJAL-919, JAL-715 - prototype service editing dialog...
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2011-08-29 jprocterJAL-633, JAL-591 - refactored ArgumentI.getValue from...
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2011-08-29 jprocterrefactored popup dialog boilerplate code to own class
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2011-08-29 jprocterJAL-633 simple concrete parameter and option objects...
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2011-08-29 jprocterJAL-633, JAL-591 - refactored ArgumentI.getValue from...
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2011-08-25 jprocterconstructor only needs GUI container interface
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2011-08-25 jprocterJAL-591 - refactored web service parameter dialog to...
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2011-08-25 jprocterJAL-715 - better validation logic
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2011-08-25 jprocterdebug dialog
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2011-08-25 jprocterJAL-715 - prevent empty elements being generated
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2011-08-24 jprocterJAL-715 dialog for interactively editing a new or existing...
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2011-08-24 jprocternew Swing and SWT capable form layout manager - miglayout
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2011-08-24 jprocterJAL-715 bugfixes and refactor of parsing code for use...
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2011-08-24 jprocterrefactor labelled button creator to JvSwingUtils
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2011-08-23 jprocterJAL-715 - simple tests and functions for IO of service...
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2011-08-23 jprocterJAL-715 - allow rest service attributes to be exported...
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2011-08-19 jprocterJAL-908 JAL-912 JAL-516 documented annotation HTML...
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2011-08-19 jprocterJAL-908,JAL-701 - patch applet to strip HTML tags from...
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2011-08-19 jprocterJAL-908 JAL-701 refactored HTML escape/unescape code...
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2011-08-18 jproctertestdata for JAL-701 and JAL-908
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2011-08-18 jprocterremove debug message
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2011-08-18 jprocterfix for JAL-701 - ensure '<' appears in tooltip in...
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2011-08-18 jprocterminor efficiency refactor
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2011-08-18 jprocterJAL-907 testdata for JAL-701
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2011-08-18 jprocterJAL-907 - test data directory readme
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2011-08-17 jprocterJAL-853 use service action attribute to index services...
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2011-08-17 jprocterremove any trailing '/' from the URL before validation...
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2011-08-17 jprocteravoid NPE race condition when several threads waiting...
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2011-08-17 jprocterfix for JAL-888
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2011-08-17 jprocterfix for JAL-888
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2011-08-17 jprocterJAL-898 - ensure we only remove a clargs progress bar...
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2011-08-17 jprocterJAL-813 fix - check whether conservation is applied...
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2011-08-17 jprocterJAL-867 - rejigged layout to a single splitpane wide...
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2011-08-15 jprocterJAL-750 automaticScrolling is true by default
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2011-08-15 jprocterJAL-750 - automaticScrolling=true by default. Refactored...
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2011-08-15 jprocterJAL-747 - warning dialog if Jalview can't resolve filename...
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2011-08-15 jprocterJAL-904 added scrollToRow and scrollToColumn methods...
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2011-08-05 jprocterexample script that will submit a muscle jabaws job...
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2011-08-05 jprocterfetch groovy script from URL (JAL-899) and show progress...
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2011-08-05 jprocterallow several progress bars on the desktop window ...
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2011-08-03 jprocterMerge branch 'master' of https://source.jalview.org...
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2011-08-03 jprocterrefactored resolvetocodebase code and reused for resource...
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2011-08-03 jprocterrefactored resolvetocodebase code and reused for resource...
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2011-08-03 jprocterfix NPE when applets stop. seems to make the simple...
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2011-08-03 jprocterrefactor schema to group swing window geometry attributes
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2011-07-28 jprocterrefer to local default setting for proxy when connecting to
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2011-07-28 jprocteradded 'since 2.x notes to parameters'. User configurable...
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2011-07-26 jprocterexample alignment for JAL-862 - removed signal peptides
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2011-07-25 jprocteruse proper encoding for storing colour as user preference...
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2011-07-22 jproctertodo for JAL-860 - associate multiple sequences with...
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2011-07-22 jprocterapplet min/max annotation shading parameter documentation...
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2011-07-22 jprocterensure propagation of colour change on annotation update...
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2011-07-22 jprocterfix NPE when annotation colourgradient is applied
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2011-07-22 jproctercode style
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2011-07-22 jprocterdefault parameter for colours in annotation shading...
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