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JAL-3954 Update hmmer client lib, testEndpoint added
2020-12-01
Ben Soares
JAL-3594 Different icon/getdown styling when launching...
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2020-12-01
Ben Soares
Merge branch 'develop' into merge/develop_and_rebase_squashe...
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2020-12-01
Ben Soares
JAL-3609 JAL-3775 Updated getdown with re-factored...
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2020-12-01
Ben Soares
JAL-3609 JAL-3775 Tests for jalview.bin.HiDPISetting
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2020-12-01
Ben Soares
JAL-3609 JAL-3775 Refactoring a bit of jalview.bin...
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2020-12-01
Ben Soares
JAL-3775 Adding Mockito jars for tests. Needed for...
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2020-12-01
Ben Soares
JAL-3660 Fix for specified output format when using...
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2020-12-01
Ben Soares
JAL-3530 Added a -nowebservicediscovery command line...
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2020-11-27
Ben Soares
JAL-3660 Fix for specified output format when using...
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2020-11-19
Ben Soares
JAL-3521 removed unnecessary parts of the ext project...
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2020-11-19
Ben Soares
JAL-3521 Minimal plugins and tasks needed to run tests...
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2020-11-13
Ben Soares
JAL-3757 JAL-3689 Fixed checks for URLs by adding checks...
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2020-11-13
Ben Soares
JAL-3775 Re-compiled Getdown jars
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2020-11-13
Ben Soares
JAL-3775 Eclipse re-formatting commit
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2020-11-13
Ben Soares
JAL-3633 last minute refinement so password box doesn...
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2020-11-13
Ben Soares
JAL-3633 Apply (proxy) button enabled when needed
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2020-11-13
Ben Soares
JAL-3633 Help documentation updated
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2020-11-13
Ben Soares
JAL-3633 Small changes to allow future fitting with...
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2020-11-13
Ben Soares
JAL-3275 JAL-3633: JAL-3275 Turned Preferences into...
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2020-11-13
Ben Soares
JAL-3633 Set proxy preferences before web calls in...
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2020-11-13
Ben Soares
JAL-3633 Memory only proxy auth password storage. Open...
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2020-11-12
Ben Soares
JAL-3633 Added Proxy Authentication credentials in...
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2020-11-12
Ben Soares
JAL-3633 Added Preferences for Proxy Authentication...
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2020-11-12
Ben Soares
JAL-3633 label.proxy_server -> label.proxy_servers
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2020-11-12
Ben Soares
JAL-3633 Remember system set proxy properties. Add...
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2020-11-12
Ben Soares
JAL-3633 pass getdown proxy settings in proxy.txt on...
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2020-11-12
Ben Soares
JAL-3633 ensure check both http:// or https:// for...
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2020-11-12
Ben Soares
JAL-3628 Error when saving alert box has been moved...
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2020-11-12
Ben Soares
JAL-3676 More explicit tooltip about resetting log...
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2020-11-12
Ben Soares
JAL-3676 Removed BACKUPFILESPRESETENTRY logging for...
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2020-11-10
Ben Soares
JAL-3628 Fixed oddly worded and non-formatted error...
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2020-11-10
Ben Soares
JAL-3676 improvement for visual selection of console...
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2020-11-10
Ben Soares
JAL-3676 code review -- added non-listed Level into...
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2020-11-10
Ben Soares
JAL-3676 Added Log Level ComboBox and Copy to Clipboard...
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2020-11-10
Ben Soares
JAL-3628 Fix for slightly incorrect boolean usage to...
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2020-11-10
Ben Soares
JAL-3628 Even more Cache.log.debug statements
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2020-11-10
Ben Soares
JAL-3628 More Cache.log.debug statements
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2020-11-06
Ben Soares
JAL-3628 Changed other calls to renameTo to use BackupFiles...
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2020-11-06
Ben Soares
JAL-3628 Changed all file1.renameTo(file2) calls to...
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2020-11-06
Ben Soares
JAL-3609 formatting save after cherry-picks
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2020-11-06
Ben Soares
JAL-3609 Allow pass-through of setHiDPIScale property...
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2020-11-06
Ben Soares
JAL-3609 Report when scale setting used.
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2020-11-06
Ben Soares
JAL-3609 New auto-scale 'formula' for linux HiDPI....
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2020-11-06
Ben Soares
JAL-3609 removed debugging prints
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2020-11-06
Ben Soares
JAL-3609 changed property names to something more palatable...
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2020-11-06
Ben Soares
JAL-3609 system properties to force a scale, or automaticall...
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2020-11-06
Ben Soares
JAL-3609 Added a -DforceHiDPISetting=true option mainly...
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2020-11-05
Ben Soares
JAL-3608 cherry pick of 92cb745e7
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2020-10-29
Ben Soares
JAL-3248 Added mention of version 'TEST' in shadow...
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2020-10-29
Ben Soares
JAL-3248 Fixed path typos in building.md/html and corrected...
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2020-10-29
Ben Soares
JAL-3248 Fixed path typos in building.md/html and corrected...
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2020-10-28
Ben Soares
JAL-3248 Added step to create the eclipse files before...
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2020-10-28
Ben Soares
JAL-3248 Added step to create the eclipse files before...
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2020-10-15
Ben Soares
JAL-3611 added quotation marks for appdir argument...
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2020-10-15
Ben Soares
Merge branch 'develop' into blocker/JAL-3611_space_character...
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2020-09-28
Ben Soares
JAL-3753 ensure correct dependencies for shadowJar...
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2020-09-28
Ben Soares
Merge branch 'develop' into bug/JAL-3753_resources_duplicate...
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2020-09-25
Ben Soares
JAL-3577 Removed default JALVIEW_VERSION from gradle...
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2020-09-25
Ben Soares
JAL-3577 Removed default JALVIEW_VERSION from gradle...
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2020-09-25
Ben Soares
JAL-3577 Removed default JALVIEW_VERSION from gradle...
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2020-09-24
Ben Soares
JAL-3577 Quick fix adding quotation marks for findProperty...
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2020-09-24
Ben Soares
JAL-3577 Quick fix adding quotation marks for findProperty...
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2020-09-24
Ben Soares
JAL-3577 Quick fix adding quotation marks for findProperty...
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2020-09-23
Ben Soares
JAL-3757 JAL-3689 Fixed checks for URLs by adding checks...
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2020-09-23
Ben Soares
JAL-3633 ensure check both http:// or https:// for...
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2020-09-23
Ben Soares
Merge branch 'develop' into bug/JAL-3753_resources_duplicate...
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2020-09-23
Ben Soares
JAL-3477 Added 10k leeway to amount of memory reserved...
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2020-09-23
Ben Soares
JAL-3753 Resources seen in tests and appropriate filters...
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2020-09-20
Ben Soares
JAL-3753 put resources in gradle run and test path
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2020-09-18
Ben Soares
JAL-3753 JAL-3754 first rejig
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2020-09-15
Ben Soares
JAL-3718 Fixed getdown auto-update. This commit Getdown...
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2020-09-15
Ben Soares
JAL-3718 force re-initialise of getdown.txt file when...
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2020-09-14
Ben Soares
Merge branch 'develop' of https://source.jalview.org...
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2020-09-14
Ben Soares
JAL-3718 force re-initialise of getdown.txt file when...
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2020-09-14
Ben Soares
JAL-3718 force re-initialise of getdown.txt file when...
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2020-09-14
Ben Soares
Merge branch 'feature/JAL-3615gzipXfam' into develop
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2020-09-14
Ben Soares
JAL-3609 HiDPI scale setting done via system prop in...
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2020-09-11
Ben Soares
JAL-3679 Added externally specified plugins dir to...
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2020-09-11
Ben Soares
JAL-3679 Added externally specified plugins dir to...
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2020-09-04
Ben Soares
JAL-3679 Added externally specified plugins dir to...
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2020-09-03
Ben Soares
Merge branch 'develop' of https://source.jalview.org...
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2020-09-02
Ben Soares
JAL-3280 Test for remote release build_properties file...
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2020-09-01
Ben Soares
JAL-3280 fixes after CR-JAL-241. Now only checking...
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2020-08-31
Ben Soares
JAL-3280 Pass appbase and appdir from getdown to jalvew...
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2020-08-28
Ben Soares
JAL-3676 adding Axis and Castor loggging properties...
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2020-08-27
Ben Soares
JAL-3676 Documentation in Help for Java Console, Logging...
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2020-08-27
Ben Soares
Merge branch 'releases/Release_2_11_1_Branch' into...
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2020-08-20
Ben Soares
JAL-2656 better read of (potential) gzip magic bytes
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2020-08-18
Ben Soares
JAL-3718 Added digestonly key to getdown.txt to copy...
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2020-08-18
Ben Soares
JAL-3676 Start of documentation in help pages logging...
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2020-08-14
Ben Soares
JAL-3676 More explicit tooltip about resetting log...
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2020-08-13
Ben Soares
JAL-3597 Increased heap passmark to <= 45MB and report...
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2020-08-13
Ben Soares
JAL-3597 Increased heap passmark to <= 45MB and report...
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2020-08-12
Ben Soares
JAL-3676 Removed BACKUPFILESPRESETENTRY logging for...
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2020-08-12
Ben Soares
Merge branch 'develop' of https://source.jalview.org...
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2020-08-12
Ben Soares
JAL-3608 Changes from code review CR-JAL-236
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2020-08-09
Ben Soares
JAL-3691 Changed .toUppoerCase().startsWith(...) to...
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2020-08-05
Ben Soares
JAL-3691 Changed .toUppoerCase().startsWith(...) to...
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2020-08-04
Ben Soares
JAL-3477 Improved command line arguments description...
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2020-08-04
Ben Soares
JAL-3477 Added -help text for jvmmempc and jvmmemmax...
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