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jalview.git
2020-09-10 gmungocJAL-2422 comments updated re ALTLOC handling commit | commitdiff | tree | snapshot
2020-05-24 Jim ProcterJAL-3407 redact Java 8 incompatible '<>' with anonymous... commit | commitdiff | tree | snapshot
2020-05-21 gmungocJAL-3551 copy Jalview features to Pymol 'p' (with pull... commit | commitdiff | tree | snapshot
2020-05-21 gmungocJAL-2422 highlight ChimeraX selection (ChimeraX-1.0... commit | commitdiff | tree | snapshot
2020-05-20 gmungocJAL-3626 use Viewer.scriptWait() to send Jmol commands... commit | commitdiff | tree | snapshot
2020-05-19 gmungocJAL-3621 corrected sequence feature sort and test commit | commitdiff | tree | snapshot
2020-05-19 gmungocMerge branch 'develop' into feature/JAL-3551Pymol commit | commitdiff | tree | snapshot
2020-05-18 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS commit | commitdiff | tree | snapshot
2020-05-18 gmungocJAL-3621 update to intervalstore v1.1 commit | commitdiff | tree | snapshot
2020-05-18 gmungocJAL-3529 test updated for revised signature of getDBRefs() commit | commitdiff | tree | snapshot
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop commit | commitdiff | tree | snapshot
2020-05-18 gmungocJAL-3613 remove debug code committed in error commit | commitdiff | tree | snapshot
2020-05-15 gmungocJAL-2422 JAL-3551 unit tests updated for code changes commit | commitdiff | tree | snapshot
2020-05-15 gmungocJAL-3619 default silently to Jmol if viewerType absent... commit | commitdiff | tree | snapshot
2020-05-15 gmungocJAL-3551 pull up Close Viewer dialog to base class commit | commitdiff | tree | snapshot
2020-05-15 gmungocMerge branch 'feature/JAL-3551Pymol' into feature/JAL... commit | commitdiff | tree | snapshot
2020-05-15 gmungocJAL-3551 raise label on ('highlight') structure residue... commit | commitdiff | tree | snapshot
2020-05-12 gmungocJAL-3518 tidy method, remove obsolete comment commit | commitdiff | tree | snapshot
2020-05-12 gmungocJAL-3518 failsafe check for null Jmol filename while... commit | commitdiff | tree | snapshot
2020-05-11 gmungocJAL-3551 concatenate colour by sequence commands for... commit | commitdiff | tree | snapshot
2020-05-11 gmungocJAL-2422 JAL-3551 viewer text/variables generalised... commit | commitdiff | tree | snapshot
2020-05-11 gmungocJAL-2422 ChimeraX paths (versions up to 1.0) added... commit | commitdiff | tree | snapshot
2020-05-11 gmungocJAL-1333 additional Chimera versions for Windows instal... commit | commitdiff | tree | snapshot
2020-05-11 gmungocJAL-2422 restore saved ChimeraX session from project commit | commitdiff | tree | snapshot
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search... commit | commitdiff | tree | snapshot
2020-04-30 gmungocJAL-3551 save structure viewer session refactorings... commit | commitdiff | tree | snapshot
2020-04-30 gmungocJAL-3551 tidied error handling for HTTP request commit | commitdiff | tree | snapshot
2020-04-25 gmungocMerge branch 'develop' into feature/JAL-3551Pymol commit | commitdiff | tree | snapshot
2020-04-22 soaresJAL-3225 save auto formatting settings in org.eclipse... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3407 release notes - JAL-247 - for auto-set-ID... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3407 fix JAL-3574 - remove from known issues for... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3574 JAL-3407 release notes commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3407 add and document ComputePeptideVariants.groovy commit | commitdiff | tree | snapshot
2020-04-21 Ben SoaresJAL-3577 changed default RELEASE dir in build.gradle... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3567 JAL-3407 document sequence features report... commit | commitdiff | tree | snapshot
2020-04-21 gmungocJAL-3210 try adding setup method to unit test failing... commit | commitdiff | tree | snapshot
2020-04-21 gmungocJAL-1889 corrected wait for consensus to be calculated commit | commitdiff | tree | snapshot
2020-04-21 Ben SoaresJAL-3577 Added newer install dirs to the deletion list... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-367 code tidy commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide commit | commitdiff | tree | snapshot
2020-04-21 gmungocJAL-3603 load annotation file from RELATIVE_URL in... commit | commitdiff | tree | snapshot
2020-04-21 Ben SoaresJAL-3602 Added configuration for enforced use of UTF... commit | commitdiff | tree | snapshot
2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips commit | commitdiff | tree | snapshot
2020-04-17 BobHansonadded .gitignore paths commit | commitdiff | tree | snapshot
2020-04-16 BobHansonJAL-3587 Load Project bug commit | commitdiff | tree | snapshot
2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit... commit | commitdiff | tree | snapshot
2020-04-16 gmungocJAL-3567 added 'imputed by Jalview' to protein conseque... commit | commitdiff | tree | snapshot
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterJAL-3407 JAL-3529 release notes commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterJAL-3529 revert ordering of DBRef addition so it reflec... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterJAL-3597 improved Memory test suite by detecting base... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterJAL-3407 release date set to 16th April, known issue... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterMerge branch 'testing/JAL-3577_jalviewversion_autoset_f... commit | commitdiff | tree | snapshot
2020-04-14 gmungocJAL-3583 remove debug logging, Javadoc added commit | commitdiff | tree | snapshot
2020-04-13 gmungocJAL-3574 test coverage corners bug/JAL-3574filterByPOS commit | commitdiff | tree | snapshot
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e... commit | commitdiff | tree | snapshot
2020-04-12 gmungocJAL-3596 change redacted commit | commitdiff | tree | snapshot
2020-04-12 gmungocJAL-3596 don't draw text over features if Show Text... commit | commitdiff | tree | snapshot
2020-04-12 gmungocJAL-3583 consistent last[Formatted]Tooltip, show once... commit | commitdiff | tree | snapshot
2020-04-09 BobHansonJAL-3587 save and reload project file fix commit | commitdiff | tree | snapshot
2020-04-09 Ben SoaresJAL-3588 Remove Examples folder in windows Program... commit | commitdiff | tree | snapshot
2020-04-09 Jim ProcterJAL-3577 automatically configure JALVIEW_VERSION for... testing/JAL-3577_jalviewversion_autoset_fixed commit | commitdiff | tree | snapshot
2020-04-08 BobHansonJAL-3253 SwingJS upgrade including J11 transpiler 3... commit | commitdiff | tree | snapshot
2020-04-08 BobHansonJAL-3253 merge of new SwingJS api commit | commitdiff | tree | snapshot
2020-04-07 soaresmerge from develop: the fixy bit merge/Jalview-JS_develop_with_develop_build.gradle_gradle.properties_utils_install4j commit | commitdiff | tree | snapshot
2020-04-07 soaresmerge from develop: the rest of the changes commit | commitdiff | tree | snapshot
2020-04-07 soaresmerge from develop: Most of the changes commit | commitdiff | tree | snapshot
2020-04-07 BobHansonJAL-3589 (old Platform) fix for Jalvew-JS/develop only. commit | commitdiff | tree | snapshot
2020-04-07 gmungocJAL-3210 fudge for JalviewJS to avoid IntervalStore... commit | commitdiff | tree | snapshot
2020-04-07 Ben SoaresJAL-3577 improvement to non-release DMG background... task/JAL-3577_Jalview_Test_installers commit | commitdiff | tree | snapshot
2020-04-07 Ben SoaresMerge branch 'task/JAL-3577_Jalview_Test_installers... commit | commitdiff | tree | snapshot
2020-04-07 Ben SoaresJAL-3577 Added DEVELOP DMG styling. Improved TEST-RELEA... commit | commitdiff | tree | snapshot
2020-04-06 Ben SoaresJAL-3577 Fixed Jalview Programme Group in Windows menu... commit | commitdiff | tree | snapshot
2020-04-06 Jim ProcterJAL-3407 redact java 8 incompatible type inference commit | commitdiff | tree | snapshot
2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers... commit | commitdiff | tree | snapshot
2020-04-06 Jim ProcterJAL-3407 updated release date to Thursday 9th April... commit | commitdiff | tree | snapshot
2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers... commit | commitdiff | tree | snapshot
2020-04-06 Ben SoaresJAL-3577 Moved application Categories for freedesktop... commit | commitdiff | tree | snapshot
2020-04-06 gmungocMerge branch 'develop' into Jalview-JS/develop commit | commitdiff | tree | snapshot
2020-04-06 Ben SoaresJAL-3577 removed debugging commit | commitdiff | tree | snapshot
2020-04-06 Ben SoaresMerge branch 'task/JAL-3577_Jalview_Test_installers... commit | commitdiff | tree | snapshot
2020-04-06 Ben SoaresJAL-3577 Added existing and new Application IDs for... commit | commitdiff | tree | snapshot
2020-04-06 gmungocJAL-3579 no Feature Editor if features not shown commit | commitdiff | tree | snapshot
2020-04-06 Ben SoaresJAL-3577 Changed shortName to INTERNAL_ID commit | commitdiff | tree | snapshot
2020-04-05 Ben SoaresJAL-3577 Changed Windows internal ID to a new value... commit | commitdiff | tree | snapshot
2020-04-05 Ben SoaresJAL-3577 Changed Windows internal ID to a new value... commit | commitdiff | tree | snapshot
2020-04-04 Ben SoaresJAL-3577 Added DS_Store for Test release to look like... commit | commitdiff | tree | snapshot
2020-04-03 Ben SoaresJAL-3577 Added a jalviewt scheme ONLY to TEST-RELEASE... commit | commitdiff | tree | snapshot
2020-04-03 Ben SoaresJAL-3577 cleaned up old DMG files. Added NON-RELEASE... commit | commitdiff | tree | snapshot
2020-04-02 Ben SoaresJAL-3577 First attempt at new folder names commit | commitdiff | tree | snapshot
2020-04-02 Ben SoaresJAL-3572 Added getdown Implementation-Version to getdow... commit | commitdiff | tree | snapshot
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