JAL-3567 translated rather than imputed peptide
authorJim Procter <jprocter@issues.jalview.org>
Tue, 21 Apr 2020 10:48:35 +0000 (11:48 +0100)
committerJim Procter <jprocter@issues.jalview.org>
Tue, 21 Apr 2020 10:48:35 +0000 (11:48 +0100)
src/jalview/datamodel/SequenceFeature.java
test/jalview/datamodel/SequenceFeatureTest.java

index 01574e1..6eeba2f 100755 (executable)
@@ -639,7 +639,7 @@ public class SequenceFeature implements FeatureLocationI
     if (!consequence.isEmpty())
     {
       sb.append(String.format(ROW_DATA, "Consequence",
-              "<i>Imputed by Jalview</i>", consequence));
+              "<i>Translated by Jalview</i>", consequence));
     }
 
     if (otherDetails != null)
index b4848a5..f8479a3 100644 (file)
@@ -350,7 +350,7 @@ public class SequenceFeatureTest
             + "<tr><td>Peptide Location</td><td>TestSeq</td><td>9</td></tr>"
             + "<tr><td>Type</td><td>variant</td><td></td></tr>"
             + "<tr><td>Description</td><td>G,C</td><td></td></tr>"
-            + "<tr><td>Consequence</td><td><i>Imputed by Jalview</i></td><td>p.Leu9Phe</td></tr>"
+            + "<tr><td>Consequence</td><td><i>Translated by Jalview</i></td><td>p.Leu9Phe</td></tr>"
             + "<tr><td>alleles</td><td></td><td>G,C</td></tr>"
             + "</table>";