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jalview.git
2008-08-26 jprocterbugfix todo for the 'edit sequence' command commit | commitdiff | tree | snapshot
2008-08-26 jproctertooltip for fetch db refs and more generic regex for... commit | commitdiff | tree | snapshot
2008-08-26 jprocterpdb xrefs added as dbrefs and as PDB file links commit | commitdiff | tree | snapshot
2008-08-26 jprocterensure successive matches to a regex have distinct... commit | commitdiff | tree | snapshot
2008-08-20 jprocterUse 0f rather than NaN to specify non-valued annotation... commit | commitdiff | tree | snapshot
2008-08-20 jproctertooltip displays formatted annotation row description... commit | commitdiff | tree | snapshot
2008-08-19 jprocterbeginning of fix for embl/cds/highlighting IO in https... commit | commitdiff | tree | snapshot
2008-08-19 jprocterfix for arrayoutofbounds bug when secondary structure... commit | commitdiff | tree | snapshot
2008-08-19 jprocterbetter check for molecule type when identifying interna... commit | commitdiff | tree | snapshot
2008-08-19 jprocterregex links for launching URL from single click on... commit | commitdiff | tree | snapshot
2008-08-15 jprocterupdate text and version checker commit | commitdiff | tree | snapshot
2008-08-15 jprocterdialog size on macs commit | commitdiff | tree | snapshot
2008-08-15 jproctercheck for crossreferences every time the menus are... commit | commitdiff | tree | snapshot
2008-08-15 jproctercatch invalid URL link exception properly commit | commitdiff | tree | snapshot
2008-08-15 jprocterincrease height of dialog commit | commitdiff | tree | snapshot
2008-08-15 jprocterallow '|' in regex for URL links to be recovered from... commit | commitdiff | tree | snapshot
2008-08-15 jproctersafer copy constructor commit | commitdiff | tree | snapshot
2008-08-15 jprocterxrefs retrieved from Uniprot commit | commitdiff | tree | snapshot
2008-08-15 jprocteradded castor back onto classpath commit | commitdiff | tree | snapshot
2008-08-13 jproctercheck for null viewport on dataset recovery commit | commitdiff | tree | snapshot
2008-08-13 jprocterensure input data can be recovered for tree and PCA... commit | commitdiff | tree | snapshot
2008-08-13 jprocterdo not try to cancel jobs that cannot be cancelled commit | commitdiff | tree | snapshot
2008-08-12 jprocterascii comment commit | commitdiff | tree | snapshot
2008-08-12 jproctermac logo resourcelocation hack commit | commitdiff | tree | snapshot
2008-08-12 jprocterfix artefacts (again) commit | commitdiff | tree | snapshot
2008-08-12 jproctercorrected target name in documentation commit | commitdiff | tree | snapshot
2008-08-12 jprocterURL help update commit | commitdiff | tree | snapshot
2008-08-12 jprocteradded nojmol parameter to disable check for jmol commit | commitdiff | tree | snapshot
2008-08-12 jproctersimpler regex-replace for path commit | commitdiff | tree | snapshot
2008-08-12 jprocterfixing paths commit | commitdiff | tree | snapshot
2008-08-12 jprocterregex blah commit | commitdiff | tree | snapshot
2008-08-12 jproctertrailing slash regexed out commit | commitdiff | tree | snapshot
2008-08-12 jprocterpath fixing commit | commitdiff | tree | snapshot
2008-08-12 jprocterresources are relative to root of jalview install path commit | commitdiff | tree | snapshot
2008-08-12 jprocterupdate to InstallAnywhere 2008 VP1 commit | commitdiff | tree | snapshot
2008-08-11 jprocterregular expression based URL link generation commit | commitdiff | tree | snapshot
2008-08-11 jprocterEnsure 'None' translates into no colour scheme applied commit | commitdiff | tree | snapshot
2008-08-11 jprocterUpgraded to IA Standard 2008 VP1 commit | commitdiff | tree | snapshot
2008-08-11 jprocterUpgraded to InstallAnywhere 2008 Standard ValuePack 1 commit | commitdiff | tree | snapshot
2008-08-10 jproctermigration to automated build test commit | commitdiff | tree | snapshot
2008-08-09 jprocterfix default build path commit | commitdiff | tree | snapshot
2008-08-09 jprocterexclude any InstallAnywhere build artefacts commit | commitdiff | tree | snapshot
2008-08-09 jprocterinstallanywhere to a destination location commit | commitdiff | tree | snapshot
2008-08-07 jprocterupdating installAnywhere autobuild commit | commitdiff | tree | snapshot
2008-08-07 jprocterheadless build of InstallAnywhere installer commit | commitdiff | tree | snapshot
2008-08-06 jproctergeneration of additional URLs for DBRefs on a sequence... commit | commitdiff | tree | snapshot
2008-08-06 jprocterextra checks for datasetsequence for when getDbRefs... commit | commitdiff | tree | snapshot
2008-08-06 jproctergetDBRefs now always returns DBRefArray if it exists... commit | commitdiff | tree | snapshot
2008-08-05 jproctervamsas documentation commit | commitdiff | tree | snapshot
2008-08-05 jprocternew vamsas session does not open a dialog box commit | commitdiff | tree | snapshot
2008-08-05 jprocterweb services and sequence fetcher added to contents commit | commitdiff | tree | snapshot
2008-08-05 jprocteradded sequence fetcher and sequence features retrieval... commit | commitdiff | tree | snapshot
2008-08-05 jprocterupdated statement of limitations for interactive annota... commit | commitdiff | tree | snapshot
2008-08-05 jprocternew sequence fetcher documentation commit | commitdiff | tree | snapshot
2008-08-05 jprocterensure das sequence sources are refreshed when das... commit | commitdiff | tree | snapshot
2008-08-05 jproctershowbutton default is true commit | commitdiff | tree | snapshot
2008-08-04 jprocterstackoverflow fix commit | commitdiff | tree | snapshot
2008-08-04 jprocterPFAM retrieval and new applet parameter commit | commitdiff | tree | snapshot
2008-08-04 jprocterpfam seed and full alignment retrieval and nicer orderi... commit | commitdiff | tree | snapshot
2008-08-04 jprocteradded 'showbutton' applet parameter commit | commitdiff | tree | snapshot
2008-08-01 jprocterupdate to feature list (more to come here for 2.4 release) commit | commitdiff | tree | snapshot
2008-08-01 jprocternew SequenceFetcher gui and visual delay indication... commit | commitdiff | tree | snapshot
2008-08-01 jprocterupdated jalview version of dasobert 1.53e client and... commit | commitdiff | tree | snapshot
2008-08-01 jproctertodo commit | commitdiff | tree | snapshot
2008-08-01 jprocterinterface for windows that display progress bars commit | commitdiff | tree | snapshot
2008-07-31 jprocteruse canonical DbSource name in GUI box, and ensure... commit | commitdiff | tree | snapshot
2008-07-31 jprocterrefactored method for registering instance of a dbSourc... commit | commitdiff | tree | snapshot
2008-07-31 jprocterquick fix for the new uniprot name schema - description... commit | commitdiff | tree | snapshot
2008-07-31 jprocteradded specific retrieval arguments to SequneceFetcher... commit | commitdiff | tree | snapshot
2008-07-18 jprocterresolve 1:many mappings for sequence associated annotat... commit | commitdiff | tree | snapshot
2008-07-18 jprocterresolve 1:many mappings from feature sequence ID to... commit | commitdiff | tree | snapshot
2008-07-18 jprocterallow findSeq to begin *after* a given sequence in... commit | commitdiff | tree | snapshot
2008-07-18 jprocterSequence label colour stored for each sequence group commit | commitdiff | tree | snapshot
2008-07-18 jproctercomment commit | commitdiff | tree | snapshot
2008-07-18 jprocterannotation file format updated to take idColour and... commit | commitdiff | tree | snapshot
2008-07-18 jprocterSequence label colour stored for each sequence group commit | commitdiff | tree | snapshot
2008-07-18 jprocterUser defined colourschemes are automatically generated... commit | commitdiff | tree | snapshot
2008-07-18 jprocterprevent exception when no default timeout is specified commit | commitdiff | tree | snapshot
2008-07-11 jprocterensure annotationElements in non-graphical annotation... commit | commitdiff | tree | snapshot
2008-06-30 jprocterjavadoc and constraint to ensure annotation labels... commit | commitdiff | tree | snapshot
2008-06-30 jprocterjava 1.1 compatibility commit | commitdiff | tree | snapshot
2008-06-30 jproctertiming of 'on load' output before any gui thread operations commit | commitdiff | tree | snapshot
2008-06-30 jproctersafer retrieval of groovy scripts from URLs commit | commitdiff | tree | snapshot
2008-06-30 jprocterincluded includeGaps flag in clustalW colour calculatio... commit | commitdiff | tree | snapshot
2008-06-26 jprocteradded URLEncoder.encode to properly escape CGI encoded... commit | commitdiff | tree | snapshot
2008-06-23 jprocterlocal sequence properties are preserved in SeqCigar... commit | commitdiff | tree | snapshot
2008-05-26 jprocterUniprot is not actually a multi-acc capable source... commit | commitdiff | tree | snapshot
2008-05-26 jprocterbugfix so MULTI_ACC capable sources value property... commit | commitdiff | tree | snapshot
2008-05-26 jprocterminor bugfix for case when PDB sequence strings are... commit | commitdiff | tree | snapshot
2008-05-12 jprocterfixed Jalview project archive bug where alignment view... commit | commitdiff | tree | snapshot
2008-05-02 jprocterbugfix to avoid null pointer exceptions being raised... commit | commitdiff | tree | snapshot
2008-05-01 jprocterfix for unicode char labels causing arrayOutOfBoundsExc... commit | commitdiff | tree | snapshot
2008-04-29 jproctercomments and version wget ping timeout fix for when... commit | commitdiff | tree | snapshot
2008-04-29 jprocteradded SeqSearch service interface. Documented and refac... commit | commitdiff | tree | snapshot
2008-04-29 jproctertrial fix for parsing NHX style trees to extract the... commit | commitdiff | tree | snapshot
2008-04-25 jprocterpotential fix for hang on opening of application window... commit | commitdiff | tree | snapshot
2008-04-22 jproctertypo on Jalview help url commit | commitdiff | tree | snapshot
2008-04-21 jprocterdocumented and refactored to facilitate headless featur... commit | commitdiff | tree | snapshot
2008-04-21 jprocteradded centre column labels menu entry to format menu commit | commitdiff | tree | snapshot
2008-04-21 jprocteradded centre annotation labels menu entry (and commente... commit | commitdiff | tree | snapshot
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