source.jalview.org Git - jalview.git/commit

git://source.jalview.org / jalview.git / commit

author	jprocter <Jim Procter>
	Fri, 1 Aug 2008 13:19:10 +0000 (13:19 +0000)
committer	jprocter <Jim Procter>
	Fri, 1 Aug 2008 13:19:10 +0000 (13:19 +0000)
commit	54e003f9b2fff47dbfea6401c3944afdb7bd37b3
tree	f7849a0026c1fdd0c942183c2cd0152137830135	tree \| snapshot
parent	b318e1301843732eabd1b34ce391828887c883df	commit \| diff

updated jalview version of dasobert 1.53e client and added Das Sequence Source discovery to the sequence fetcher

33 files changed:

src/jalview/ws/DBRefFetcher.java		diff \| blob \| history
src/jalview/ws/DasSequenceFeatureFetcher.java		diff \| blob \| history
src/jalview/ws/SequenceFetcher.java		diff \| blob \| history
src/jalview/ws/dbsources/DasSequenceSource.java	[new file with mode: 0644]	blob
src/jalview/ws/dbsources/EmblSource.java		diff \| blob \| history
src/jalview/ws/dbsources/Pdb.java		diff \| blob \| history
src/jalview/ws/dbsources/Pfam.java		diff \| blob \| history
src/jalview/ws/dbsources/Uniprot.java		diff \| blob \| history
src/jalview/ws/dbsources/das/DasSequenceSourceListener.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/das/DAS_FeatureRetrieve.java		diff \| blob \| history
src/org/biojava/dasobert/das/DAS_Feature_Handler.java		diff \| blob \| history
src/org/biojava/dasobert/das/DAS_Sequence_Handler.java	[new file with mode: 0755]	blob
src/org/biojava/dasobert/das/FeatureThread.java		diff \| blob \| history
src/org/biojava/dasobert/das/SequenceThread.java	[new file with mode: 0755]	blob
src/org/biojava/dasobert/dasregistry/Das1Source.java		diff \| blob \| history
src/org/biojava/dasobert/dasregistry/DasCoordinateSystem.java		diff \| blob \| history
src/org/biojava/dasobert/dasregistry/DasSource.java		diff \| blob \| history
src/org/biojava/dasobert/dasregistry/DasSourceComparator.java		diff \| blob \| history
src/org/biojava/dasobert/eventmodel/AbstractDasEvent.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/eventmodel/FeatureEvent.java		diff \| blob \| history
src/org/biojava/dasobert/eventmodel/SequenceEvent.java		diff \| blob \| history
src/org/biojava/dasobert/feature/AbstractFeatureTrack.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/AbstractSegment.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/FeatureComparator.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/FeatureMapComparator.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/FeatureTrack.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/FeatureTrackConverter.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/FeatureTrackImpl.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/HistogramFeature.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/HistogramSegment.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/Segment.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/SegmentComparator.java	[new file with mode: 0644]	blob
src/org/biojava/dasobert/feature/SegmentImpl.java	[new file with mode: 0644]	blob

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