jalview.git
2017-05-29 tcofoegbuJAL-1648 improvement on finder searchbox keyboard contr...
2017-05-29 tcofoegbuJAL-1648 code fix - enter key should pick selected...
2017-05-26 tcofoegbuMerge branch 'features/JAL-1648_cache_user_inputs'...
2017-05-26 tcofoegbuJAL-1648 fix to transfer focus back to alignment frame...
2017-05-25 Jim ProcterMerge branch 'develop' into features/JAL-1648_cache_use...
2017-05-22 gmungocJAL-2504 update the right feature colour when creating... bug/JAL-2510amendFeatures
2017-05-22 gmungocJAL-2544 unit tests for sort by feature score
2017-05-22 gmungocJAL-2544 check feature overlaps selection region
2017-05-22 kiramtMerge remote-tracking branch 'origin/bug/JAL-2256'...
2017-05-22 Jim ProcterJAL-2418 patch build - broken htsjdk import
2017-05-19 gmungocJAL-2526 removed redundant call to Sequence.findPosition()
2017-05-18 Jim ProcterMerge branch 'bug/JAL-2388_typeCheckAlignView.getUpdate...
2017-05-18 Jim ProcterJAL-2388 return empty hidden columns for fully visible...
2017-05-18 kiramtJAL-2256 Corrected AllCols/Rows iterator behaviour... bug/JAL-2256
2017-05-18 Jim ProcterJAL-2418 remove explicit test suite stats
2017-05-17 Jim ProcterMerge branch 'develop' into documentation/JAL-2418_rele...
2017-05-17 Jim ProcterMerge branch 'bug/JAL-2510amendFeatures' into develop
2017-05-17 Jim ProcterJAL-2447 add links to issues.jalview.org for experiment...
2017-05-17 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into...
2017-05-17 Jim ProcterJAL-2447 experimental section in ‘Whats New’
2017-05-17 Jim ProcterJAL-2447 JAL-2295 JAL-2296 documenting as experimental...
2017-05-17 Jim ProcterMerge branch 'develop' into documentation/JAL-2418_rele...
2017-05-17 Jim ProcterMerge branch 'features/JAL-2447experimentalFlag' into...
2017-05-17 Jim ProcterJAL-2418 release notes
2017-05-17 gmungocJAL-2504 use (and update) defaults for new feature...
2017-05-17 gmungocMerge branch 'develop' into bug/JAL-2510amendFeatures
2017-05-16 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into...
2017-05-16 Jim ProcterJAL-2418 release notes
2017-05-16 Jim ProcterJAL-384 documentation on custom colours groovy examples
2017-05-16 Jim ProcterJAL-384 - groovy scripts for conserved/unconserved...
2017-05-16 Jim ProcterJAL-2418 release notes
2017-05-16 Jim ProcterJAL-2418 JAL-2316 added to new features
2017-05-16 Jim ProcterJAL-2316 tweaking docs and links in help
2017-05-16 Jim ProcterJAL-2418 release 2.10.2 release notes template
2017-05-16 Jim Procteralternative patch for JAL-2339 readability in java...
2017-05-16 gmungocJAL-2403 simplify instantiation / configuration of...
2017-05-16 kiramtJAL-2522 Missed fix to applet
2017-05-16 kiramtJAL-2388 Rationalised hashCode method in HiddenColumns
2017-05-16 Jim ProcterMerge branch 'bug/JAL-2507_rnasecstrstockholm' into...
2017-05-15 Jim ProcterJAL-2507 fix test: knockon from capitalisation on secon... bug/JAL-2507_rnasecstrstockholm
2017-05-15 Jim ProcterMerge branch 'bug/JAL-2507_rnasecstrstockholm' into...
2017-05-15 Jim ProcterJAL-2311 disable and relocate Jared service tests to...
2017-05-15 Jim ProcterJAL-2507 capitalisation for annotation lines generated...
2017-05-15 Jim ProcterJAL-2507 case insensitive recognition of annotation...
2017-05-15 gmungocJAL-2532 new feature types and colour changes from...
2017-05-15 Jim ProcterJAL-2507 - required callers to specify exact ignore...
2017-05-15 Jim ProcterJAL-2535 quick hack to implement posterior probabilitie...
2017-05-15 kiramtMerge branch 'develop' of https://source.jalview.org...
2017-05-15 kiramtJAL-2388 Add missed optimisation
2017-05-15 Jim ProcterMerge branch 'features/JAL-2376_add-horizontal-bar...
2017-05-15 Jim ProcterJAL-2371 create a default ResidueShader when constructi...
2017-05-12 Jim ProcterMerge branch 'features/JAL-2435splitScreenFont' into...
2017-05-12 Jim ProcterJAL-2418 broken help ref
2017-05-12 Jim ProcterJAL-2435 documentation and what’s new
2017-05-12 Jim ProcterJAL-2435 mention new checkbox in linked cDNA/Protein...
2017-05-12 Jim ProcterJAL-2435 mirror antiAlias setting between cDNA and...
2017-05-12 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into...
2017-05-12 Jim ProcterJAL-2388 mention overview popup in documentation
2017-05-12 Jim ProcterJAL-2388 checkbox in overview popup for applet
2017-05-12 Jim ProcterMerge branch 'features/JAL-2228_efficient_featurecounts...
2017-05-12 Jim ProcterJAL-2228 updated script in help docs, renamed docs...
2017-05-11 Jim ProcterMerge branch 'bug/JAL-2507_rnasecstrstockholm' into...
2017-05-11 Jim ProcterJAL-2509 JAL-2507 allow whitespace in GS annotation...
2017-05-11 Jim ProcterJAL-2507 JAL-2509 allow whitespace==null for annotation...
2017-05-11 Jim ProcterJAL-2507 test if an annotation is ‘whitespace’
2017-05-11 Jim ProcterJAL-2507 Annotation.EMPTY_ANNOTATION - non-null whitesp...
2017-05-10 kiramtMerge branch 'develop' of https://source.jalview.org...
2017-05-10 kiramtJAL-2522 Fix to cursor scrolling
2017-05-09 Jim ProcterJAL-2507 spit out tests for ‘{‘ WUSS io from ‘[‘ WUSS...
2017-05-09 Jim ProcterJAL-2509 verify stockholm parser’s bracket regex is...
2017-05-09 Jim ProcterJAL-2509 extend set of brackets recognised by stockholm...
2017-05-09 Jim ProcterJAL-2507 JAL-2509 extend test to cover round trip of...
2017-05-09 Jim ProcterJAL-2507 unpaired RNA marked as ‘ ‘ in Stockholm SS...
2017-05-09 Jim ProcterJAL-2507 output secondary structure regardless of prese...
2017-05-09 Jim ProcterJAL-2507 simplify round trip test via AppletFormatAdapter
2017-05-09 Jim ProcterJAL-2507 test for alignment+rna annotation -> Stockholm...
2017-05-09 gmungocJAL-1632 correct i18n and NPE
2017-05-09 kiramtJAL-2388 Added checkbox to toggle hidden columns menu...
2017-05-08 gmungocJAL-1933 Spanish tooltips for annotation
2017-05-08 gmungocJAL-1632 i18n for warning messages
2017-05-08 gmungocMerge remote-tracking branch 'origin/bug/JAL-2515'...
2017-05-08 kiramtJAL-2515 Id panel in applet updated for NPE on urlProvider bug/JAL-2515
2017-05-08 kiramtJAL-2512 And corresponding test bug/JAL-2512
2017-05-08 kiramtJAL-2512 And applet
2017-05-08 kiramtJAL-2512 Fix to show non-gap positions in None colour...
2017-05-05 gmungocMerge branch 'develop' into features/JAL-2435splitScree...
2017-05-05 gmungocJAL-964 JAL-2510 update Feature Settings from Amend...
2017-05-05 kiramtMerge remote-tracking branch
2017-05-05 tcofoegbuJAL-2484 adjusted default cache settings panel's left...
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into
2017-05-04 tcofoegbuJAL-1648 improvements: enter key closes the popup and...
2017-05-04 tcofoegbuJAL-1648 resolved CR-JAL-41 review issues
2017-05-04 gmungocJAL-2506 allow graduated colour as default in new Seque...
2017-05-04 gmungocJAL-2510 ensure modified feature type is displayed
2017-05-04 gmungocMerge branch 'develop' of https://source.jalview.org...
2017-05-04 gmungocJAL-2504 allow feature type to be specified for Create...
2017-05-04 Jim ProcterMerge branch 'develop' into features/JAL-2228_efficient...
2017-05-04 Jim ProcterMerge branch 'bug/JAL-2507_rnasecstrstockholmoutput...
2017-05-04 Jim ProcterMerge branch 'features/JAL-2503_filteronquantitativeann...
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