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jalview.git
2020-06-07 BobHansonJAL-3446 AppletParams commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 rearranged parameters for JalviewJS API methods commit | commitdiff | tree | snapshot
2020-06-07 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 reorganized JalviewJSApp (accidentally put... commit | commitdiff | tree | snapshot
2020-06-07 BobHansonreorganized JalviewJSApp (accidentally put that in... commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 differences.txt now delivered with SwingJS... commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 JavaScript interface commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 Desktop fix for embedding commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJAL-3446 no actual changes; just using meaningful frame... commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJAL-3446 adds Jmol viewer embedding. commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJAL-3446 adds Jmol viewer embedding. commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJmol 15.1.3 rebuilt commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJAL-3379 JalviewJS-API specs - preliminary commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 embedded file for proper name matching commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 UrlDownloadClient and Test commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 Desktop JS needs getIdentifiersOrgData(); commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 forgot to escape Java in modified Platform... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 new Locale("") moved to Platform for review. commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 AlignmentSorter/Test more documentation... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 AlignmentSorter/Test fixed for instance commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 removes all JalviewJSApp dependency from jalvi... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonRefactoring of Jalview, JalviewAppLoader, JalviewApp... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonSwingJS upgrade for JSUtil and JSUtilI commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 new Jmol 15.1.3 jar commit | commitdiff | tree | snapshot
2020-06-04 Ben SoaresJAL-3225 Minor change to building.md for flexmark,... commit | commitdiff | tree | snapshot
2020-06-04 Ben SoaresJAL-3225 Removed dependency on command line pandoc... commit | commitdiff | tree | snapshot
2020-06-04 gmungocJAL-1191 reduce logging level for warnings commit | commitdiff | tree | snapshot
2020-06-04 gmungocJAL-3446 post-merge unit test fixes, formatting commit | commitdiff | tree | snapshot
2020-06-03 BobHansonI see... commit | commitdiff | tree | snapshot
2020-06-03 BobHansonadds link for __j2sflags.htm to template.html commit | commitdiff | tree | snapshot
2020-06-03 BobHansonupdated template.html commit | commitdiff | tree | snapshot
2020-06-03 BobHanson_jvjmol.txt commit | commitdiff | tree | snapshot
2020-06-03 BobHansonJAL-3664 support for new Locale(""), meaning "not actua... commit | commitdiff | tree | snapshot
2020-06-03 BobHansonJAL-3664 support for user.home, user.dir, user commit | commitdiff | tree | snapshot
2020-06-03 BobHansonJAL-3446 adds SIFTs JAL-3625 SiftsClient commit | commitdiff | tree | snapshot
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider... commit | commitdiff | tree | snapshot
2020-06-03 BobHansonJAL-3446 AsyncSwingWorker upgrade commit | commitdiff | tree | snapshot
2020-06-03 BobHansonJAL-3446 from JAL-3253 Discoverers commit | commitdiff | tree | snapshot
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider commit | commitdiff | tree | snapshot
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 JAL-3401 from JAL-3253 HoldRepaint and SeqCanv... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 from JAL-3253-applet Jalview2XML integration... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 from JAL-3253-applet Desktop and Jws2Discovere... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 JAL-3401 from JAL-3253-applet AlignmentPanel... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 from JAL-3253 AppletFormatAdapter not fixed commit | commitdiff | tree | snapshot
2020-06-02 BobHansonPreferences/StructureViewer fix commit | commitdiff | tree | snapshot
2020-06-02 BobHansonthis was supposed to go on a separate branch. Didn... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 JAL-3253 JAL-3445 BSML bbb XML format reader... commit | commitdiff | tree | snapshot
2020-06-02 Ben SoaresJAL-3225 some fixes to build.gradle for working in... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 JAL-3253 Preferences commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3446 from JAL-3253-applet StockholmFile updated... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonhelpful hints from Ben commit | commitdiff | tree | snapshot
2020-06-02 gmungocJAL-3446 latest jmol zip from JAL-3253-applet (commit... commit | commitdiff | tree | snapshot
2020-06-02 gmungocJAL-3446 fix broken test commit | commitdiff | tree | snapshot
2020-06-02 BobHansonBob's gitignore addition commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet Jalview.java commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet Cache applicationProperti... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet Cache applicationProperti... commit | commitdiff | tree | snapshot
2020-06-02 BobHansonJAL-3626 from JAL-3253-applet web page embedding commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3626 from JAL-3253-applet JalviewLite scrollTo... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3626 from JAL-3253-applet CalculationChooser commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3626 from JAL-3253-applet StructureViewer/Chooser commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet temp. Desktop instance... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet JalviewApp integration commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet JalviewApp integration commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet AppletParams + Cache... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet ArgsParser commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet Platform JS interface... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL-3253-applet Preferences final static... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL-3523-applet JalviewApp and JalviewJSApi commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL3253-applet core_jvjmol.z.js static... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3626 Regex optimization from JAL-3253-applet; also... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonTHIRDPARTYLIBS referred to intervalstore-v1.0 still commit | commitdiff | tree | snapshot
2020-06-01 BobHansoncorrects Platform.openURL commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3626 adding compatible Platform.java commit | commitdiff | tree | snapshot
2020-06-01 BobHansonSwingJS update commit | commitdiff | tree | snapshot
2020-06-01 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonswingjs/api, javajs/async commit | commitdiff | tree | snapshot
2020-06-01 soaresJAL-3225 small fixes for building within Eclipse commit | commitdiff | tree | snapshot
2020-05-28 soaresMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-05-28 BobHansonJAL-3626 transpiler and SwingJS upgrade commit | commitdiff | tree | snapshot
2020-05-28 BobHansonVarna fix for hashtable.remove(value) [unclear] commit | commitdiff | tree | snapshot
2020-05-28 BobHansonJAL-3636 ColorUtils cleaner test for hex color commit | commitdiff | tree | snapshot
2020-05-28 soaresMerge branch 'develop' into Jalview-JS/develop commit | commitdiff | tree | snapshot
2020-05-28 BobHansonGitter comment 2020.05.28 Cache.log.err(msg) not appearing commit | commitdiff | tree | snapshot
2020-05-28 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS commit | commitdiff | tree | snapshot
2020-05-28 gmungocJAL-3624 use temp file for SIFT download in JS, correct... commit | commitdiff | tree | snapshot
2020-05-28 gmungocJAL-3624 log when SIFTS mapping fails commit | commitdiff | tree | snapshot
2020-05-27 Ben SoaresJAL-3541 ensure deletion of cloverReportDir commit | commitdiff | tree | snapshot
2020-05-27 Ben SoaresJAL-3541 small fix for clover.xml location expected... commit | commitdiff | tree | snapshot
2020-05-26 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2020-05-26 gmungocJAL-1889 disable test failing on build server commit | commitdiff | tree | snapshot
2020-05-26 soaresMerge branch 'bug/JAL-3541_cloverReport_gradle_task_fai... commit | commitdiff | tree | snapshot
2020-05-26 soaresJAL-3541 added a property/variable style comment to... bug/JAL-3541_cloverReport_gradle_task_fails commit | commitdiff | tree | snapshot
2020-05-26 gmungocJAL-3624 log when SIFTS mapping fails commit | commitdiff | tree | snapshot
2020-05-26 gmungocMerge branch 'feature/JAL-3624siftsInJS' into develop commit | commitdiff | tree | snapshot
2020-05-25 soaresJAL-3541 selectively merged build.gradle and gradle... commit | commitdiff | tree | snapshot
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