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jalview.git
2017-05-11
kiramt
JAL-2491 Unit tests and updates
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2017-05-10
kiramt
JAL-2491 Make it work with cursor movement
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2017-05-10
kiramt
Merge branch 'develop' of https://source.jalview.org...
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2017-05-10
kiramt
JAL-2522 Fix to cursor scrolling
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2017-05-10
kiramt
JAL-2491 Cursor scrolling
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2017-05-09
Jim Procter
JAL-2507 spit out tests for ‘{‘ WUSS io from ‘[‘ WUSS...
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2017-05-09
Jim Procter
JAL-2509 verify stockholm parser’s bracket regex is...
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2017-05-09
Jim Procter
JAL-2509 extend set of brackets recognised by stockholm...
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2017-05-09
Jim Procter
JAL-2507 JAL-2509 extend test to cover round trip of...
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2017-05-09
tcofoegbu
JAL-2520 improvement to download and update structure...
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2017-05-09
tcofoegbu
JAL-2520 unit test for improvement to download structur...
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2017-05-09
Jim Procter
JAL-2507 unpaired RNA marked as ‘ ‘ in Stockholm SS...
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2017-05-09
Jim Procter
JAL-2507 output secondary structure regardless of prese...
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2017-05-09
Jim Procter
JAL-2507 simplify round trip test via AppletFormatAdapter
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2017-05-09
kiramt
JAL-2491 Tidies and more refactoring
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2017-05-09
Jim Procter
JAL-2507 test for alignment+rna annotation -> Stockholm...
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2017-05-09
kiramt
JAL-2491 Resolved highlighting and initialisation problems
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2017-05-09
tcofoegbu
JAL-2465 fix to dynamically specify data source type...
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2017-05-09
gmungoc
JAL-1632 correct i18n and NPE
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2017-05-09
kiramt
JAL-2388 Added checkbox to toggle hidden columns menu...
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2017-05-08
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2017-05-08
kiramt
JAL-2491 More wrap corrections
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2017-05-08
gmungoc
JAL-1933 Spanish tooltips for annotation
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2017-05-08
gmungoc
JAL-1632 i18n for warning messages
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2017-05-08
gmungoc
Merge remote-tracking branch 'origin/bug/JAL-2515'...
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2017-05-08
kiramt
JAL-2491 Tweaks to avoid scroll problems at bottom...
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2017-05-08
kiramt
JAL-2515 Id panel in applet updated for NPE on urlProvider
bug/JAL-2515
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2017-05-08
kiramt
JAL-2512 And corresponding test
bug/JAL-2512
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2017-05-08
kiramt
JAL-2512 And applet
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2017-05-08
kiramt
JAL-2512 Fix to show non-gap positions in None colour...
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2017-05-08
kiramt
JAL-2491 Started moving other scrolling fns into viewpo...
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2017-05-05
gmungoc
Merge branch 'develop' into features/JAL-2435splitScree...
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2017-05-05
gmungoc
JAL-964 JAL-2510 update Feature Settings from Amend...
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2017-05-05
kiramt
Merge remote-tracking branch
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2017-05-05
tcofoegbu
JAL-2484 adjusted default cache settings panel's left...
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2017-05-05
kiramt
JAL-2491 Scrolling and interaction with overview/find...
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2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
features/JAL-2388hiddencolumnschanges
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2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
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2017-05-05
kiramt
JAL-2491 More working split panel + new scrolling
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2017-05-04
tcofoegbu
JAL-1648 improvements: enter key closes the popup and...
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2017-05-04
tcofoegbu
JAL-1648 resolved CR-JAL-41 review issues
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2017-05-04
gmungoc
JAL-2506 allow graduated colour as default in new Seque...
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2017-05-04
gmungoc
JAL-2510 ensure modified feature type is displayed
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2017-05-04
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2017-05-04
gmungoc
JAL-2504 allow feature type to be specified for Create...
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2017-05-04
Jim Procter
Merge branch 'develop' into features/JAL-2228_efficient...
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2017-05-04
Jim Procter
Merge branch 'bug/JAL-2507_rnasecstrstockholmoutput...
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2017-05-04
Jim Procter
Merge branch 'features/JAL-2503_filteronquantitativeann...
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2017-05-04
Jim Procter
Merge branch 'features/JAL-2393customMatrices' into...
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2017-05-04
Jim Procter
JAL-1656 make RNAML->Stockholm round trip test pass...
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2017-05-04
Jim Procter
JAL-2507 JAL-2509 allow differences in visibility of...
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2017-05-04
Jim Procter
JAL-2507 JAL-2509 new assert to compare secondary struc...
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2017-05-04
Jim Procter
fix for JAL-2509 - don’t replace all bracket types...
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2017-05-04
Jim Procter
fix for JAL-2507 - resolve stockholm per residue annota...
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2017-05-04
tcofoegbu
Merge branch 'features/JAL-2473_set-minimium-dimensions...
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2017-05-04
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2017-05-04
Jim Procter
Merge branch 'features/JAL-2503_filteronquantitativeann...
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2017-05-04
Jim Procter
Merge branch 'features/JAL-2393customMatrices' into...
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2017-05-03
Jim Procter
JAL-2393 JAL-2416 refresh the score model menu when...
features/JAL-2393customMatrices
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2017-05-03
Jim Procter
JAL-2503 show threshold slider for quantitative annotat...
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2017-05-03
Jim Procter
JAL-2503 AlignmentAnnotation.isQuantitative() test
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2017-05-03
kiramt
JAL-2491 Tidies
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2017-05-03
gmungoc
JAL-2246 basic sanity test of fetching example accessions
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2017-05-03
kiramt
JAL-2491 Wrapped panel scrolling
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2017-05-03
Jim Procter
Merge branch 'features/JAL-2432_annotbypercent' into...
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2017-05-03
Jim Procter
JAL-1933 JAL-2501 i18n for all auto calculated descriptions
features/JAL-2432_annotbypercent
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2017-05-03
Jim Procter
JAL-1933 show occupancy in tooltip for row
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2017-05-03
gmungoc
JAL-2246 test a Uniprot fetch
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2017-05-03
Jim Procter
JAL-2432 honour percentage checkbox when entering value...
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2017-05-03
Jim Procter
JAL-2432 applet: only enable percent checkbox when...
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2017-05-03
Jim Procter
JAL-2432 percentage checkbox follows threshold value...
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2017-05-03
gmungoc
JAL-2105 Ensembl REST now at 5.0
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2017-05-03
gmungoc
JAL-2485 JAL-2246 test Uniprot FTS summary
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2017-05-03
Jim Procter
JAL-2432 recover state for ‘display percentage’ checkbox
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2017-05-03
Jim Procter
JAL-2432 simplify code
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2017-05-03
kiramt
JAL-2491 sort of working overview/find interaction...
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2017-05-02
Jim Procter
JAL-1632 validate CalculationChooser when selection...
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2017-05-02
Jim Procter
JAL-1632 enable/disable CalculationChooser buttons...
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2017-05-02
Jim Procter
JAL-1632 compare size of input against minimums for...
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2017-05-02
Jim Procter
JAL-1632 OK->Calculate, Cancel->Close buttons
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2017-05-02
Jim Procter
JAL-1632 removed ‘tree’ option and changed dialog layout
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2017-05-02
gmungoc
JAL-1933 Spanish for Occupancy
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2017-05-02
Jim Procter
JAL-2424 fixme’s removed
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2017-05-02
Jim Procter
JAL-2424 update assert to correct width for normalising...
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2017-05-02
Jim Procter
JAL-2424 resolved, assert updated to pass (1f != 1d)
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2017-05-02
gmungoc
JAL-2447 EXPERIMENTAL preference (option in Tools menu)
features/JAL-2447experimentalFlag
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2017-05-02
Jim Procter
Merge branch 'develop' into features/JAL-2393customMatrices
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2017-05-02
Jim Procter
Merge branch 'bug/JAL-2424getVisibleContigs' into develop
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2017-05-02
gmungoc
JAL-2499 inlined two 1-line methods
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2017-05-02
gmungoc
JAL-2499 JAL-2403 push 'configure for view' inside...
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2017-05-02
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
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2017-05-02
kiramt
JAL-2491 first addition of new event
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2017-05-01
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2017-05-01
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2017-05-01
tcofoegbu
JAL-2482 bug fix
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2017-05-01
tcofoegbu
JAL-2482 unit test for bug fix
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2017-05-01
gmungoc
JAL-2489 JAL-2371 reinstate calls to
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2017-05-01
tcofoegbu
JAL-2465 missed commit for refactore renaming of getPdb...
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2017-05-01
tcofoegbu
JAL-2465 bugfix and rerefactor renamed getPdbFile(...
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2017-05-01
tcofoegbu
JAL-2465 unit test for bugfix
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