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jalview.git
2019-06-26 Jim ProcterJAL-3111 get rid of nasty tab characters commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3332 test to check for duplicate db sources and... commit | commitdiff | tree | snapshot
2019-06-26 Ben SoaresJAL-3130 Added all groovy jars for groovy console commit | commitdiff | tree | snapshot
2019-06-26 Ben SoaresMerge branch 'develop' into improvement/JAL-3322_getdow... commit | commitdiff | tree | snapshot
2019-06-26 Ben SoaresJAL-3322 Splashcreen now appears instantly with new... commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3330 JAL-3332 relocate and simplify BeforeClass... commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3330 test to verify sub/attributeName array is... commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3330 javadoc commit | commitdiff | tree | snapshot
2019-06-25 Ben SoaresJAL-3322 replaced invokeAndWait(r) with r.run() and... commit | commitdiff | tree | snapshot
2019-06-25 Ben SoaresJAL-3289 Ehancements to ARCHIVE building and script... commit | commitdiff | tree | snapshot
2019-06-25 Ben SoaresJAL-3289 ARCHIVE now implemented (requires a compiled... commit | commitdiff | tree | snapshot
2019-06-24 Ben SoaresJAL-3289 implemented CHANNEL=LOCAL,RELEASE,TEST-RELEASE... commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3330 merge styles onto originating view after fetch... commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3330 dbreffetcher: record any feature display model... commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3330 merge styles onto originating views when show... commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3330 mergeFeatureStyles - needs test coverage commit | commitdiff | tree | snapshot
2019-06-24 Ben SoaresJAL-3322 improve visibility of versioning of launcher commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3111 formatting commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3111 JAL-2069 JAL-2808 documentation for feature... commit | commitdiff | tree | snapshot
2019-06-24 Ben SoaresJAL-3289 Start looking at automating location in appbas... commit | commitdiff | tree | snapshot
2019-06-22 Ben SoaresJAL-3328 improvement to the EQinvoke code commit | commitdiff | tree | snapshot
2019-06-21 Ben SoaresJAL-3328 Made choice of invokeLater or invokeAndWait... commit | commitdiff | tree | snapshot
2019-06-21 Jim ProcterJAL-3111 added Colour By ID and an overview of Jalview... commit | commitdiff | tree | snapshot
2019-06-21 Ben SoaresJAL-3328 JAL-3300 changed invokeLaters to invokeAndWait... commit | commitdiff | tree | snapshot
2019-06-21 Ben SoaresJAL-3328 Getdown version number, changed to 1.8.3-1... commit | commitdiff | tree | snapshot
2019-06-21 Ben SoaresJAL-3328 Improved progress bar. Higher-res file icons... commit | commitdiff | tree | snapshot
2019-06-21 Ben SoaresJAL-3322 Adding a configurable getdown version number... commit | commitdiff | tree | snapshot
2019-06-21 Ben SoaresMerge branch 'develop' into improvement/JAL-3322_getdow... commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 JAL-2962 JAL-2903 JAL-2986 release notes commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 last final release date for 2.11.0 ! commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 2.11 improvement JAL-3205 JAL-3203 commit | commitdiff | tree | snapshot
2019-06-20 Ben SoaresJAL-3322 New progress bar. Added option to report appba... commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 JAL-1424 release notes commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 JAL-2816 docs commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 signed off ’done’ issues in Jira as of now: commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 JAL-3130 JAL-3235 Java 11 specific known defec... commit | commitdiff | tree | snapshot
2019-06-20 Ben SoaresJAL-3323 Improved macOS Old Jalview Uninstaller commit | commitdiff | tree | snapshot
2019-06-19 Jalview Development... JAL-3111 codesign the uninstaller again commit | commitdiff | tree | snapshot
2019-06-19 Ben SoaresMerge branch 'merge/JAL-3310_and_JAL-3300' into develop commit | commitdiff | tree | snapshot
2019-06-19 Ben SoaresJAL-3321 Last pieces of the getdown-launcher.jar upgrad... commit | commitdiff | tree | snapshot
2019-06-19 Ben SoaresJAL-3310 Removing i4jruntime.jar from dist. Not needed... commit | commitdiff | tree | snapshot
2019-06-19 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... commit | commitdiff | tree | snapshot
2019-06-19 Jim ProcterJAL-3111 release notes for JAL-3313 commit | commitdiff | tree | snapshot
2019-06-19 Jim ProcterJAL-3111 formatting
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2019-06-19 Jim ProcterMerge branch 'develop' into documentation/JAL-3111_rele... commit | commitdiff | tree | snapshot
2019-06-19 Jim ProcterJAL-3111 release notes for JAL-27830 JAL-2876 JAL-2567... commit | commitdiff | tree | snapshot
2019-06-19 Ben SoaresJAL-3321 Corrected the badly configured getdown-launche... commit | commitdiff | tree | snapshot
2019-06-18 gmungocJAL-3313 don't double count mapped codons commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... bug/JAL-2830_editManglesDatasetSequence commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 JAL-2446 mentioned in context with NCList... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 JAL-2684 JAL-2360 JAL-2416 release notes commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresMerge branch 'develop' into merge/JAL-3310_and_JAL... commit | commitdiff | tree | snapshot
2019-06-18 gmungocJAL-3187 javadoc commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3286 JAL-3111 release notes commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'develop' into documentation/JAL-3111_rele... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'bug/JAL-3286duplicatePdbQuery' into develop commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 JAL-3003 documentation note commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-2296 JAL-2295 document in release notes post featur... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 - new known issue JAL-3314 commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 release notes for JAL-3073 JAL-3042 commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 JAL-3080 documentation commit | commitdiff | tree | snapshot
2019-06-18 gmungocJAL-3304 option to export linked features also for... commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresJAL-3310 tidying unecessary files from getdown src... commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresJAL-3312 Fixed SHIFT-CMD/SHIFT-CTRL Key combinations... commit | commitdiff | tree | snapshot
2019-06-18 gmungocJAL-3304 option to export linked features in Jalview... commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2019-06-18 gmungocJAL-3187 i18n show linked features checkboxes commit | commitdiff | tree | snapshot
2019-06-18 gmungocJAL-3305 mirror popup menu column selections in split... commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresMerge branch 'develop' into merge/JAL-3310_and_JAL... commit | commitdiff | tree | snapshot
2019-06-17 Ben SoaresJAL-3310 JAL-3300 two getdown fixes merged commit | commitdiff | tree | snapshot
2019-06-17 gmungocJAL-2792 JAL-3187 linked features (if shown) in Feature... commit | commitdiff | tree | snapshot
2019-06-17 Ben SoaresJAL-3310 Remove install4j from getdown-launcher.jar... commit | commitdiff | tree | snapshot
2019-06-17 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... commit | commitdiff | tree | snapshot
2019-06-17 Jim ProcterJAL-3111 rejigged release notes again commit | commitdiff | tree | snapshot
2019-06-17 Jim ProcterJAL-2975,JAL-2647,JAL-1767,JAL-2965, JAL-3111 updated... commit | commitdiff | tree | snapshot
2019-06-17 gmungocJAL-3187 update alignAs code and unit tests for 'shared... commit | commitdiff | tree | snapshot
2019-06-17 gmungocJAL-3187 update unit test - protein variants not now... commit | commitdiff | tree | snapshot
2019-06-17 gmungocJAL-3187 add sequence to feature details table (and... commit | commitdiff | tree | snapshot
2019-06-17 Jim ProcterJAL-3311 remove menus and documentation relating to... tasks/JAL-3311_removeVamsasMenu commit | commitdiff | tree | snapshot
2019-06-14 Ben SoaresJAL-3295 pre-merged code with JAL-3295 branch which... commit | commitdiff | tree | snapshot
2019-06-14 Ben SoaresJAL-3278 A system.out.println turned into a cache.log... commit | commitdiff | tree | snapshot
2019-06-14 Ben SoaresJAL-3300 instant Splash screen on getdown commit | commitdiff | tree | snapshot
2019-06-14 Ben SoaresJAL-3130 added a bit of gradle support for compiling... commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterJAL-3111 release date now 20th June. more release note... commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterJAL-3111 report build type and commit in stdout from... commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterJAL-3299 JAL-3280 javadoc on BuildDetails bean commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterJAL-3111 report time when Jalview was built (consider... commit | commitdiff | tree | snapshot
2019-06-14 gmungocJAL-3302 transfer visible 'linked' features to Chimera commit | commitdiff | tree | snapshot
2019-06-13 Jalview Development... Merge branch 'releases/Release_2_11_Branch' into develop commit | commitdiff | tree | snapshot
2019-06-13 gmungocJAL-3303 ignore deletions when computing peptide variants commit | commitdiff | tree | snapshot
2019-06-13 Jim ProcterMerge branch 'bug/JAL-3295_CMD_select_not_working_in_se... commit | commitdiff | tree | snapshot
2019-06-13 gmungocJAL-3143 recognise lnc_RNA as transcript commit | commitdiff | tree | snapshot
2019-06-13 Ben SoaresJAL-3295 Can now compile/run/debug in Eclipse with... commit | commitdiff | tree | snapshot
2019-06-12 Ben SoaresJAL-3295 Fixed CMD-select of sequences in alignment... commit | commitdiff | tree | snapshot
2019-06-12 Ben SoaresJAL-3299 Fixed gitHash and gitBranch definitions in... commit | commitdiff | tree | snapshot
2019-06-11 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures commit | commitdiff | tree | snapshot
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