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jalview.git
2021-04-13
Ben Soares
JAL-3830 Improved jalview.bat to find either pwsh.exe...
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2021-04-06
Jim Procter
JAL-3832 dummy 3d-beacons database client and code...
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2021-04-06
arngucci
JAL-3829 more testing wit tdbeacons data columns and...
arnaud/develop
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2021-04-01
Arnaldo
JAL-3829 attempt to fix my changes to follow the Jira...
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2021-03-31
Ben Soares
JAL-3830 BAT file wrapper around powershell, so jalview...
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2021-03-30
Ben Soares
JAL-3830 Follow all SymbolicLinks in Windows powershell...
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2021-03-29
Arnaldo
fixed last commit
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2021-03-29
Arnaldo
Request now parses the whole structures, need to fix...
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2021-03-26
Ben Soares
JAL-3830 delete channel.props and channel.propsv when...
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2021-03-25
Arnaldo
TDB.executeRequest fix & test passed
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2021-03-25
Arnaldo
Added (and passed !)all the FTS tests from test.fts...
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2021-03-25
Arnaldo
Created 3Dbeacons data_columns.txt Test passed for...
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2021-03-24
Ben Soares
JAL-3830 Moved wrappers to bin/jalview.* and make a...
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2021-03-17
Ben Soares
JAL-3830 Allow paths to start with '~'. Make path check...
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2021-03-17
Ben Soares
JAL-3830 Now using a single universal bash script ...
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2021-03-17
Ben Soares
JAL-3830 add the windows bash script to getdown files...
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2021-03-17
Ben Soares
JAL-3830 bash script that works in both cygwin and...
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2021-03-15
Ben Soares
JAL-3830 Delete wrapper scripts and getdown *v files...
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2021-03-15
Ben Soares
JAL-3830 powershell wrapper tested on linux, macos...
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2021-03-15
Arnaldo
added untracked parsing attempts files
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2021-03-15
Arnaldo
Adding tests for 3DB, currently 2/4 corrects on PanelTest
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2021-03-14
Ben Soares
JAL-3830 minor fix in powershell wrapper
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2021-03-14
Ben Soares
JAL-3830 powershell follows symlinks as they do exist...
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2021-03-14
Ben Soares
JAL-3830 Powershell wrapper now works cross-platform...
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2021-03-14
Ben Soares
JAL-3830 Make wrapper scripts executable
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2021-03-12
Ben Soares
JAL-3830 powershell wrapper tested and fixed
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2021-03-12
Ben Soares
JAL-3830 improved bash scripts. Added powershell script...
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2021-03-12
Ben Soares
JAL-3830 unix and macos wrappers. Symbolic link to...
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2021-03-11
Ben Soares
JAL-3830 Improved for .app dir name with spaces, e...
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2021-03-10
Ben Soares
JAL-3830 install4j adds script to Jalview.app/Contents...
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2021-03-10
Ben Soares
JAL-3830 first draft of wrapper script to go in macOS...
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2021-03-05
Jalview Development...
Merge branch 'task/JAL-3796_notarization' into develop
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2021-03-05
Jalview Development...
Merge branch 'develop' into task/JAL-3796_notarization
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2021-03-05
Jalview Development...
JAL-3796 minimal steps for notarization and the entitle...
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2021-03-05
Ben Soares
JAL-3618 Enable appBundleIsTraversable in JFileChooser...
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2021-03-04
Ben Soares
JAL-3594 Allow a channel to use a different preferences...
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2021-03-02
Arnaldo
First commit of 3DB FTS Panel & Restclient
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2021-02-18
gmungoc
JAL-3822 pass panel height and width to wrapped geometr...
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2021-02-18
gmungoc
JAL-2422 remove temporary patch (requires ChimeraX...
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2021-02-10
Ben Soares
JAL-3251 On linux set (sun.awt.X11.XToolkit.)awtAppClas...
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2021-02-10
Ben Soares
JAL-3521 Changed wording of INSTALLATION in source...
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2021-02-08
Ben Soares
JAL-3521 Adding a build_properties into sourceDist...
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2021-02-05
gmungoc
JAL-2422 updated unit test for ChimeraX command change
Develop-2_11_2_0-d20210205
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2021-02-04
gmungoc
JAL-2422 a fix and a fudge for two failing ChimeraX...
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2021-01-28
Jalview Development...
Merge branch 'task/JAL-3796_notarization_no_uninstaller...
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2021-01-28
Jalview Development...
Merge branch 'task/JAL-3805_Remove_Uninstall_Old_Jalvie...
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2021-01-28
Jalview Development...
Merge branch 'develop' into task/JAL-3796_notarization_...
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2021-01-28
Jalview Development...
Merge branch 'develop' into task/JAL-3796_notarization
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2021-01-26
Ben Soares
JAL-3521 Updating file opening marker to %u
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2021-01-26
Ben Soares
JAL-3521 Debian mime-type and desktop helper files...
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2021-01-22
Ben Soares
JAL-3805 Smaller DMG Finder windows for all DS_Store...
task/JAL-3805_Remove_Uninstall_Old_Jalview_application_for_develop_branch
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2021-01-22
Ben Soares
JAL-3805 New DS_Store for smaller DMG Finder window
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2021-01-22
Ben Soares
JAL-3805 Remove Uninstall Old Jalview.app in Release_2_...
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2021-01-21
gmungoc
JAL-3038 corrected code that reads editable JComboBox...
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2021-01-14
Jalview Development...
JAL-3796 update signature for uninstaller on OSX
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2021-01-14
Jalview Development...
JAL-3796 update to Install4j 8.0.10 and add config...
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2021-01-11
Ben Soares
JAL-3789 Use j2s.config.altfileproperty in .j2s for...
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2021-01-11
Ben Soares
JAL-3789 New swingjs for Java2Script 3.2.10 with j2s...
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2020-12-14
Ben Soares
JAL-3280 Fixed the version checking URL formulation...
Develop-2_11_2_0-d20201215
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2020-12-14
Ben Soares
JAL-3783 Reverting to using groovy-all-2.4.12-indy...
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2020-12-14
Ben Soares
JAL-3628 Test for doubly saved single backup file scheme
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2020-12-14
Ben Soares
JAL-3594 Allow setting of getdownappbase and getdowndis...
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2020-12-14
Ben Soares
JAL-3280 Test for remote release build_properties file...
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2020-12-14
Ben Soares
JAL-3280 fixes after CR-JAL-241. Now only checking...
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2020-12-14
Ben Soares
JAL-3280 Pass appbase and appdir from getdown to jalvew...
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2020-12-11
Ben Soares
JAL-3594 Defintely want SplashScreen to appear in the...
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2020-12-11
Ben Soares
JAL-3594 Changed building.md to describe -PCHANNEL...
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2020-12-11
Ben Soares
JAL-3594 Changed building.md to reflect change of name...
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2020-12-11
Ben Soares
JAL-3594 Adjustments to allow JalviewJS to use ChannelP...
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2020-12-11
Ben Soares
JAL-3775 JAL-3633 Make java.net.Authenticator code...
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2020-12-10
Ben Soares
Merge branch 'task/JAL-3594_updated--CHANNEL_cosmetics...
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2020-12-10
Ben Soares
JAL-3594 Better Jalview Develop banner
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2020-12-10
Ben Soares
JAL-3594 Documentation added to building.md for using...
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2020-12-10
Ben Soares
Merge branch 'task/JAL-3594_updated--CHANNEL_cosmetics...
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2020-12-10
Ben Soares
Merge branch 'merge/develop_and_rebase_squashed_merge_J...
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2020-12-09
Ben Soares
JAL-3594 Improved About banners for develop and test...
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2020-12-09
Ben Soares
JAL-3594 Images for splash screen
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2020-12-09
Ben Soares
JAL-3594 JAL-3728 Added taskbar icons to desktop and...
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2020-12-08
Ben Soares
Merge branch 'merge/develop_and_rebase_squashed_merge_J...
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2020-12-08
Ben Soares
JAL-3594 Change main window title
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2020-12-08
Ben Soares
JAL-3594 DMG fixes
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2020-12-07
Ben Soares
JAL-3594 added BG logo. Changed some named Jalviews...
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2020-12-07
Ben Soares
JAL-3754 Fixed jar task creating strange dir because...
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2020-12-07
Ben Soares
JAL-3754 Fixed jar task creating strange dir because...
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2020-12-05
Ben Soares
JAL-3594 Default values for channel properties defined...
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2020-12-04
Ben Soares
JAL-3594 Added rotating logo png
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2020-12-04
Ben Soares
JAL-3754 fixed a problem with jar task creating a stray...
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2020-12-04
Ben Soares
JAL-3775 added the Platform.isLinux() check for test...
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2020-12-04
Ben Soares
JAL-3594 New jalview.util.ChannelProperties to get...
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2020-12-04
Ben Soares
JAL-3594 Generating GIMP XCF files for getdown and...
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2020-12-04
Ben Soares
JAL-3594 Release images and channel properties
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2020-12-03
Ben Soares
JAL-3594 New way for build.gradle to override propertie...
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2020-12-02
Ben Soares
JAL-3594 new logos, icons and cosmetics for getdown...
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2020-12-01
Ben Soares
JAL-3594 Different icon/getdown styling when launching...
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2020-12-01
Ben Soares
Merge branch 'develop' into merge/develop_and_rebase_sq...
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2020-12-01
Ben Soares
JAL-3609 JAL-3775 Updated getdown with re-factored...
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2020-12-01
Ben Soares
JAL-3609 JAL-3775 Tests for jalview.bin.HiDPISetting
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2020-12-01
Ben Soares
JAL-3609 JAL-3775 Refactoring a bit of jalview.bin...
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2020-12-01
Ben Soares
JAL-3775 Adding Mockito jars for tests. Needed for...
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2020-12-01
Ben Soares
JAL-3660 Fix for specified output format when using...
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