| 2005-04-14 |
amwaterhouse | not added to the palette layer |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
amwaterhouse | use 3 as the threshold |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
amwaterhouse | if image is null, repaint |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
amwaterhouse | blosum colour now displayed ok |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
amwaterhouse | use webservice info |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
amwaterhouse | update status bar with mouse over |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
amwaterhouse | use webservice info to display web service state |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
amwaterhouse | new class |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
jprocter | consistent percentage gaps filter for conservation... |
commit | commitdiff | tree | snapshot |
| 2005-04-14 |
jprocter | added quality calculation from Jalview118, and scale... |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
jprocter | Gap characters are now properly detected in the conserv... |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
jprocter | Fixed so that all alternate residues are used to calcul... |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
jprocter | Added order-preservation for clustalW alignment. No... |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | sortByTreeMenu added |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | use AlignFrame.NEW_WINDOW_WIDTH |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | getTree method added |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | if not active tree, colour threshold grey |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | use NEW_WINDOW_WIDTH |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | invalidate alignPanel before changing size |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | new constructor for addtodesktop, sliders set to top... |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | draws last residue |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | repainting issues fixed |
commit | commitdiff | tree | snapshot |
| 2005-04-13 |
amwaterhouse | treeMenuItem added, conservation sliders, finder top... |
commit | commitdiff | tree | snapshot |
| 2005-04-11 |
jprocter | added the alignment quality calculation from the old... |
commit | commitdiff | tree | snapshot |
| 2005-04-11 |
jprocter | Conservation symbols : + = all props are conserved... |
commit | commitdiff | tree | snapshot |
| 2005-04-11 |
jprocter | Fixed the job-failed message. |
commit | commitdiff | tree | snapshot |
| 2005-04-11 |
jprocter | Now tries to set viewing parameters for distances and... |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
jprocter | slight mods again. |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | try out spinning logo |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | return from painting if size is 0 |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | Printing wrapped alignment corrected |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | Display of wrapped search results corrected |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | endREs -1 |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | conservation changed to quality |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | clear the last area in fast paint |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | scale above, left right added |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | bug adding null sequence to selection fixed |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | reads fasta files from uniprot web page |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
amwaterhouse | scale above, left rigt added |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
jprocter | WebStartLocation form. |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
jprocter | trival. |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
jprocter | Fixed broken jnlp creation. |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
jprocter | remember: do not check in quick bug fixes that you... |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
jprocter | recent rebuild of the JPred client from WSDL2Java |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
jprocter | Alignment quality with funky coloured histograms. |
commit | commitdiff | tree | snapshot |
| 2005-04-08 |
jprocter | updated build strategy and checking for portability. |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | no more group editor |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | check annotation label widths as well as id widths |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | calls repaint, not just refreshpanels |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | for now, draw selection box bottom -1 |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | seals selection box if at bottom of alignment |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | draws threshold position according to threshold, not... |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | no longer used |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | Remove paintFlag ref |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | GRPAH_HEIGHT variable |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | checkfor gap characters |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | paintFlag removed |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | fastPaint flag added |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | reomve call to repaint |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | find top and bottom of group |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | add note about desktopManager |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | add fastPaint boolean |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | remove setdecorated line |
commit | commitdiff | tree | snapshot |
| 2005-04-07 |
amwaterhouse | amino acid gifs |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | dont draw first block if colour is null |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | fill in the gaps |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | setDesktopManager(new) |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | paint is now in drawComponent |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | showAnnotation added |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | annoation in print version |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | DONT SHOW ANNOTATIONS IF WRAPPED |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
jprocter | next version of Jpred functionality using new client... |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
jprocter | New method for helping to quickly map different aligned... |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
jprocter | New client code for JPred service includes return of... |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | mosueOver graph gives int, not float |
commit | commitdiff | tree | snapshot |
| 2005-04-06 |
amwaterhouse | Fast paint method implemented |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | Alignment Annotation added |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | ignore jnetconf |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | parses jpredfile into new alignment annotation |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | update conservation and consensus |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | anti_aliasing on |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | Uses conservation graph |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | testing Graphics2D |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | setMaximizable(false) |
commit | commitdiff | tree | snapshot |
| 2005-04-01 |
amwaterhouse | Build date determination |
commit | commitdiff | tree | snapshot |
| 2005-03-31 |
jprocter | doh - stupid jim. |
commit | commitdiff | tree | snapshot |
| 2005-03-31 |
jprocter | utility classes used in build.xml, and a dodgy perl... |
commit | commitdiff | tree | snapshot |
| 2005-03-31 |
jprocter | JavaC target set to 1.4 for proper compilation of 1... |
commit | commitdiff | tree | snapshot |
| 2005-03-31 |
jprocter | Added a flag to control if the "/<seq_start>-<seq_end... |
commit | commitdiff | tree | snapshot |
| 2005-03-31 |
jprocter | added a an axis log4j appender property to the jalview... |
commit | commitdiff | tree | snapshot |
| 2005-03-30 |
jprocter | new libraries for soap bits. |
commit | commitdiff | tree | snapshot |
| 2005-03-30 |
jprocter | fixed the log4j messages. |
commit | commitdiff | tree | snapshot |
| 2005-03-30 |
jprocter | cleaned up some comments and exception messages. |
commit | commitdiff | tree | snapshot |
| 2005-03-30 |
jprocter | Updated version of axis to fix the j1.5 webstart problems. |
commit | commitdiff | tree | snapshot |
| 2005-03-30 |
jprocter | Fixed a sensible default leaf distance (for files where... |
commit | commitdiff | tree | snapshot |
| 2005-03-24 |
amwaterhouse | fix printing error |
commit | commitdiff | tree | snapshot |
| 2005-03-23 |
amwaterhouse | new seq selection -1 |
commit | commitdiff | tree | snapshot |
| 2005-03-23 |
amwaterhouse | adjustForRemoveLeft / Right added |
commit | commitdiff | tree | snapshot |
| 2005-03-23 |
amwaterhouse | works even if col is 1 residue |
commit | commitdiff | tree | snapshot |
| 2005-03-23 |
amwaterhouse | reads MSF files even if PILEUP is missing |
commit | commitdiff | tree | snapshot |
| next |
git://source.jalview.org / jalview.git / shortlog