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jalview.git
2012-05-11 jprocterJAL-972 workaround for working out source URL for pre... commit | commitdiff | tree | snapshot
2012-05-11 jprocterformatting commit | commitdiff | tree | snapshot
2012-05-11 jprocterJAL-972 migration from dasobert to jdas registry URLs commit | commitdiff | tree | snapshot
2012-05-11 jprocterJAL-972 local do not have a coordsys element with sourc... commit | commitdiff | tree | snapshot
2012-05-11 jprocterJAL-424 TODO: new method signature for local source... commit | commitdiff | tree | snapshot
2012-05-10 jprocterJAL-1085 - ensure sequence fetching client waits around... commit | commitdiff | tree | snapshot
2012-05-10 jprocterJAL-972 JAL-1084 propagate reference to local authentic... commit | commitdiff | tree | snapshot
2012-05-10 jprocterJAL-1083 - graceful failover to single ID query mode... commit | commitdiff | tree | snapshot
2012-05-10 jprocterformatting commit | commitdiff | tree | snapshot
2012-05-10 jprocterJAL-1083 graceful failover to one ID per sequences... commit | commitdiff | tree | snapshot
2012-05-10 jprocterJAL-1075 better layout and info box for source browser commit | commitdiff | tree | snapshot
2012-05-01 jprocterJAL-1075 tweak layout and test display for tree based... commit | commitdiff | tree | snapshot
2012-04-24 jprocterJAL-1075, JAL-1061, JAL-1064 - introduced second tier... commit | commitdiff | tree | snapshot
2012-04-24 jprocterJAL-1064 sequence database sources are stored and retri... commit | commitdiff | tree | snapshot
2012-04-24 jprocterJAL-972 correct das registry default URL (JDAS automati... commit | commitdiff | tree | snapshot
2012-04-24 jprocterJAL-972 - test to distinguish sources based on age... commit | commitdiff | tree | snapshot
2012-04-24 jprocterJAL-1074 fix - missing tag indicating alignments are... commit | commitdiff | tree | snapshot
2012-04-20 jprocterJAL-972, JAL-1072 new default dasregistry.org registry... commit | commitdiff | tree | snapshot
2012-04-20 jprocterJAL-1064 JAL-671 - add tree based database dialog as... commit | commitdiff | tree | snapshot
2012-04-20 jprocterJAL-1064 - hack to create menu item label for each... commit | commitdiff | tree | snapshot
2012-04-20 jprocterJAL-1064 - refactor to iterate over many sources associ... commit | commitdiff | tree | snapshot
2012-04-20 jprocterJAL-972 - correct name when constructing db-source... commit | commitdiff | tree | snapshot
2012-04-20 jprocter(JAL-1071) hacked the square matrix that stores the... commit | commitdiff | tree | snapshot
2012-04-11 jprocterdialog for browsing and selecting datasources hierarchi... commit | commitdiff | tree | snapshot
2012-03-30 jprocterJAL-1062 - recognise and split off the range qualifier... commit | commitdiff | tree | snapshot
2012-03-30 jprocter(JAL-972) format tweak for source information box commit | commitdiff | tree | snapshot
2012-03-30 jprocterMerge branch 'JAL-972-dasobert-to-jdas' into JAL-972... commit | commitdiff | tree | snapshot
2012-03-30 jprocter(JAL-972) jdas latest build commit | commitdiff | tree | snapshot
2012-03-30 jprocterlogic bug commit | commitdiff | tree | snapshot
2012-03-28 jprocterJAL-893 JAL-842 - updated VARNA - fix typo in InstallAn... commit | commitdiff | tree | snapshot
2012-03-28 jprocterMerge branch 'JAL-976_jabaws2supp' into develop commit | commitdiff | tree | snapshot
2012-03-28 jprocterJAL-1060 - prototype GUI with traffic light coding... commit | commitdiff | tree | snapshot
2012-03-28 jprocterJAL-1060 - record which services are invalid, valid... commit | commitdiff | tree | snapshot
2012-03-27 jprocterformatting commit | commitdiff | tree | snapshot
2012-03-27 jprocterJAL-976 - tweak web services gui so empty menus don... commit | commitdiff | tree | snapshot
2012-03-27 jprocter(JAL-976) - consistent ordering of services according... commit | commitdiff | tree | snapshot
2012-03-27 jprocterJAL-976 - hack to provide consistent ordering of JABAWS... commit | commitdiff | tree | snapshot
2012-03-27 jprocter(JAL-976) refactor JABAWS1 list commit | commitdiff | tree | snapshot
2012-03-05 jprocter(JAL-942) comment out non-functional buttons in VARNA commit | commitdiff | tree | snapshot
2012-03-05 jprocter(JAL-942) clearer view structure menu entry commit | commitdiff | tree | snapshot
2012-03-05 jprocterJAL-942 - sensible name on window commit | commitdiff | tree | snapshot
2012-03-05 jprocterJAL-942 - make sure rna structures get a sensible name commit | commitdiff | tree | snapshot
2012-03-02 jprocter(JAL-1052) todo for output of RNA consensus lines commit | commitdiff | tree | snapshot
2012-03-02 jprocter(JAL-1052) basic consensus line parsing to rna structur... commit | commitdiff | tree | snapshot
2012-03-02 jprocter(JAL-1052) make RNA secondary structure string parsing... commit | commitdiff | tree | snapshot
2012-03-02 jprocterformatting commit | commitdiff | tree | snapshot
2012-03-02 jprocter(JAL-942) more tweaking mapping between 2-struct and... commit | commitdiff | tree | snapshot
2012-03-02 jprocter(JAL-842) debug mouseover for sequences that don't... commit | commitdiff | tree | snapshot
2012-03-02 jprocter(JAL-842) todo commit | commitdiff | tree | snapshot
2012-03-02 jprocterremove unnecessary method commit | commitdiff | tree | snapshot
2012-03-02 jprocterefficiency, and ensure mouseover messages originating... commit | commitdiff | tree | snapshot
2012-03-01 jprocter(JAL-842) ensure deletions are accounted for when highl... commit | commitdiff | tree | snapshot
2012-03-01 jprocter(JAL-893) update to VARNAv3.9-dev version commit | commitdiff | tree | snapshot
2012-03-01 jprocterMerge branch 'Release_2_7_Branch' into develop commit | commitdiff | tree | snapshot
2012-03-01 jprocterdebug local source management buttons and formatting commit | commitdiff | tree | snapshot
2012-03-01 jprocterrevised version of Jdas with simpler connectionProperty... commit | commitdiff | tree | snapshot
2012-02-29 jprocterupdate to latest build commit | commitdiff | tree | snapshot
2012-02-29 jproctermove from dasobert to jdas multithreaded feature fetchi... commit | commitdiff | tree | snapshot
2012-02-29 jproctertidy imports and switch over to use das source registry API commit | commitdiff | tree | snapshot
2012-02-29 jproctertidy imports commit | commitdiff | tree | snapshot
2012-02-29 jprocterfallout from refactoring registry datamodel to a source... commit | commitdiff | tree | snapshot
2012-02-29 jprocter(JAL-972) replaced biodas with jdas sources datastructu... commit | commitdiff | tree | snapshot
2012-02-29 jprocterrefactoring dassequencesource code fallout commit | commitdiff | tree | snapshot
2012-02-29 jprocterrefactored das sequence source creation code to the... commit | commitdiff | tree | snapshot
2012-02-29 jprocterremoved excess imports commit | commitdiff | tree | snapshot
2012-02-29 jprocterupdated das sequence source for jdas client and refacto... commit | commitdiff | tree | snapshot
2012-02-29 jprocterJAL-972 - refactored local source builder to registry... commit | commitdiff | tree | snapshot
2012-02-29 jprocterJAL-966 todo for jalview 3 api commit | commitdiff | tree | snapshot
2012-02-29 jprocterjalview das registry and source api and jdas specific... commit | commitdiff | tree | snapshot
2012-02-29 jprocterjdas runtime dependencies commit | commitdiff | tree | snapshot
2012-02-29 jprocterupdated build of jdas commit | commitdiff | tree | snapshot
2012-02-29 jprocterjdas doesn't need a listener for das sequence retrieval... commit | commitdiff | tree | snapshot
2012-02-13 jproctergroovy nature not needed in project commit | commitdiff | tree | snapshot
2012-02-13 jprocterremove dead imports commit | commitdiff | tree | snapshot
2012-02-13 jprocter(JAL-972) relative refs for libraries and some addition... commit | commitdiff | tree | snapshot
2012-02-13 jprocter(JAL-972) jdas source retrieval and use of jdas structu... commit | commitdiff | tree | snapshot
2012-02-13 jprocter(JAL-972) updated jdas to latest version includign... commit | commitdiff | tree | snapshot
2012-02-13 jprocterchange over source attribute datamodel commit | commitdiff | tree | snapshot
2012-02-13 jprocterremoved all dasobert code and begun to replace with... commit | commitdiff | tree | snapshot
2012-02-12 Jim Procter(JAL-1016) noted position where race condition occurs commit | commitdiff | tree | snapshot
2012-02-12 Jim Procter(JAL-1022) ensure all Jmol model filenames are normalis... commit | commitdiff | tree | snapshot
2012-02-12 Jim Procter(JAL-1022) reverted to original strategy of escaping... commit | commitdiff | tree | snapshot
2012-02-12 Jim Procter(JAL-1050) ensure all filenames passed in to the load... commit | commitdiff | tree | snapshot
2012-02-12 Jim Procter(JAL-1025 JAL-1022) File based equivalence used to... commit | commitdiff | tree | snapshot
2012-02-12 Jim Procter(JAL-1049) only store state reference for sequence... commit | commitdiff | tree | snapshot
2012-02-12 Jim ProcterJAL-1025 JAL-1022 use File based equivalence to map... commit | commitdiff | tree | snapshot
2012-02-12 Jim ProcterJAL-715 - remove platform dependent includes commit | commitdiff | tree | snapshot
2012-01-17 jprocterMerge branch 'JAL-1040_jar_manifest_fix' into develop commit | commitdiff | tree | snapshot
2012-01-11 jprocterMerge branch 'JAL-1023_viewall2structsw7' into Release_... commit | commitdiff | tree | snapshot
2012-01-11 jprocterremoved empty lines and fields in manifest like: commit | commitdiff | tree | snapshot
2011-12-08 jprocter(JAL-1023) ensure filename is properly escaped before... commit | commitdiff | tree | snapshot
2011-12-08 jprocterremove commented lines commit | commitdiff | tree | snapshot
2011-12-08 jproctersimple escape utility class for JAL-1023 patch commit | commitdiff | tree | snapshot
2011-11-21 jprocterMerge branch 'JAL-368_dragabovedesktop' into develop commit | commitdiff | tree | snapshot
2011-11-21 jprocterMerge branch 'JAL-368_dragabovedesktop' into Release_2_... commit | commitdiff | tree | snapshot
2011-11-21 jprocter(JAL-368) ensure window never gets a negative Y coordin... commit | commitdiff | tree | snapshot
2011-11-20 jprocterMerge branch 'patch_JAL-1004' into develop commit | commitdiff | tree | snapshot
2011-11-20 jprocterMerge branch 'patch_JAL-1004' into Release_2_7_Branch commit | commitdiff | tree | snapshot
2011-11-20 jprocter(JAL-1004) add mouse listener to internal panel commit | commitdiff | tree | snapshot
2011-11-15 jprocterMerge branch 'JAL-976_jabaws2supp' into develop commit | commitdiff | tree | snapshot
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