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jalview.git
2020-07-04
Jim Procter
JAL-3638 don’t move cursor to next gap after moving...
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2020-07-04
Jim Procter
JAL-3680 check whether a sequence selection exists...
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2020-06-02
Jim Procter
JAL-3638 shift+arrow keys in cursor mode jumps cursor...
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2020-05-27
Ben Soares
JAL-3541 ensure deletion of cloverReportDir
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2020-05-27
Ben Soares
JAL-3541 small fix for clover.xml location expected...
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2020-05-26
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2020-05-26
gmungoc
JAL-1889 disable test failing on build server
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2020-05-26
soares
Merge branch 'bug/JAL-3541_cloverReport_gradle_task_fai...
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2020-05-26
soares
JAL-3541 added a property/variable style comment to...
bug/JAL-3541_cloverReport_gradle_task_fails
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2020-05-26
gmungoc
JAL-3624 log when SIFTS mapping fails
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2020-05-26
gmungoc
Merge branch 'feature/JAL-3624siftsInJS' into develop
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2020-05-25
soares
JAL-3541 selectively merged build.gradle and gradle...
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2020-05-25
Jim Procter
JAL-3626 rescue automatic configuration of JALVIEW_VERS...
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2020-05-19
gmungoc
JAL-3621 corrected sequence feature sort and test
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2020-05-19
gmungoc
JAL-3624 use temp file for SIFT download in JS, correct...
feature/JAL-3624siftsInJS
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2020-05-18
gmungoc
JAL-3463 avoid Thread.sleep() as not supported in SwingJS
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2020-05-18
gmungoc
JAL-3621 update to intervalstore v1.1
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2020-05-18
gmungoc
JAL-3529 test updated for revised signature of getDBRefs()
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2020-05-18
gmungoc
Merge branch 'Jalview-JS/develop' into develop
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2020-05-18
gmungoc
JAL-3613 remove debug code committed in error
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2020-05-15
Ben Soares
JAL-3541 Fixed report path for build artifacts
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2020-05-14
Ben Soares
JAL-3541 Added mem setting and jvmArgs for cloverReporting
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2020-05-14
Ben Soares
JAL-3541 Individual tests now instrumented and reported...
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2020-05-12
Ben Soares
JAL-3541 Helpers for running tests, and other commands...
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2020-05-12
Ben Soares
JAL-3541 JavaExec tasks for cloverInstr and cloverRepor...
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2020-05-01
gmungoc
JAL-3613 check sequence overlap when matching search...
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2020-04-22
soares
JAL-3225 save auto formatting settings in org.eclipse...
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2020-04-21
Jim Procter
Merge branch 'documentation/JAL-3407_2.11.1_release...
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2020-04-21
Jim Procter
JAL-3407 add GPL license to Jalview source files
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2020-04-21
Jim Procter
JAL-3407 release notes - JAL-247 - for auto-set-ID...
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2020-04-21
Jim Procter
Merge branch 'documentation/JAL-3407_2.11.1_release...
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2020-04-21
Jim Procter
JAL-3407 fix JAL-3574 - remove from known issues for...
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2020-04-21
Jim Procter
Merge branch 'documentation/JAL-3407_2.11.1_release...
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2020-04-21
Jim Procter
JAL-3574 JAL-3407 release notes
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2020-04-21
Jim Procter
Merge branch 'bug/JAL-3574filterByPOS' into documentati...
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2020-04-21
Jim Procter
Merge branch 'documentation/JAL-3407_2.11.1_release...
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2020-04-21
Jim Procter
JAL-3407 add and document ComputePeptideVariants.groovy
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2020-04-21
Ben Soares
JAL-3577 changed default RELEASE dir in build.gradle...
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2020-04-21
Jim Procter
Merge branch 'develop' of source.jalview.org/git/jalvie...
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2020-04-21
Jim Procter
JAL-3567 JAL-3407 document sequence features report...
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2020-04-21
gmungoc
JAL-3210 try adding setup method to unit test failing...
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2020-04-21
gmungoc
JAL-1889 corrected wait for consensus to be calculated
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2020-04-21
Ben Soares
JAL-3577 Added newer install dirs to the deletion list...
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2020-04-21
Jim Procter
Merge branch 'bug/JAL-3567virtualFeatureCoordinates...
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2020-04-21
Jim Procter
JAL-367 code tidy
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2020-04-21
Jim Procter
JAL-3567 translated rather than imputed peptide
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2020-04-21
gmungoc
JAL-3603 load annotation file from RELATIVE_URL in...
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2020-04-21
Ben Soares
JAL-3602 Added configuration for enforced use of UTF...
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2020-04-17
gmungoc
JAL-3567 unit tests for linked feature tooltips
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2020-04-17
BobHanson
added .gitignore paths
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2020-04-16
BobHanson
JAL-3587 Load Project bug
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2020-04-16
gmungoc
JAL-3567 adjust layout of linked feature report, unit...
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2020-04-16
gmungoc
JAL-3567 added 'imputed by Jalview' to protein conseque...
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2020-04-16
gmungoc
JAL-3567 report mapped location for virtual features...
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2020-04-14
Jim Procter
JAL-3407 JAL-3529 release notes
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2020-04-14
Jim Procter
Merge branch 'bug/JAL-3529_uniprotidsinstockholm' into...
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2020-04-14
Jim Procter
JAL-3529 revert ordering of DBRef addition so it reflec...
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2020-04-14
Jim Procter
JAL-3597 improved Memory test suite by detecting base...
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2020-04-14
Jim Procter
JAL-3407 release date set to 16th April, known issue...
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2020-04-14
Jim Procter
Merge branch 'testing/JAL-3577_jalviewversion_autoset_f...
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2020-04-14
gmungoc
JAL-3583 remove debug logging, Javadoc added
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2020-04-13
gmungoc
JAL-3574 test coverage corners
bug/JAL-3574filterByPOS
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2020-04-13
gmungoc
JAL-3574 Matcher with integer/long value pattern (e...
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2020-04-12
gmungoc
JAL-3596 change redacted
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2020-04-12
gmungoc
JAL-3596 don't draw text over features if Show Text...
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2020-04-12
gmungoc
JAL-3583 consistent last[Formatted]Tooltip, show once...
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2020-04-09
BobHanson
JAL-3587 save and reload project file fix
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2020-04-09
Ben Soares
JAL-3588 Remove Examples folder in windows Program...
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2020-04-09
Jim Procter
JAL-3577 automatically configure JALVIEW_VERSION for...
testing/JAL-3577_jalviewversion_autoset_fixed
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2020-04-08
BobHanson
JAL-3253 SwingJS upgrade including J11 transpiler 3...
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2020-04-08
BobHanson
JAL-3253 merge of new SwingJS api
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2020-04-07
soares
merge from develop: the fixy bit
merge/Jalview-JS_develop_with_develop_build.gradle_gradle.properties_utils_install4j
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2020-04-07
soares
merge from develop: the rest of the changes
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2020-04-07
soares
merge from develop: Most of the changes
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2020-04-07
BobHanson
JAL-3589 (old Platform) fix for Jalvew-JS/develop only.
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2020-04-07
gmungoc
JAL-3210 fudge for JalviewJS to avoid IntervalStore...
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2020-04-07
Ben Soares
JAL-3577 improvement to non-release DMG background...
task/JAL-3577_Jalview_Test_installers
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2020-04-07
Ben Soares
Merge branch 'task/JAL-3577_Jalview_Test_installers...
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2020-04-07
Ben Soares
JAL-3577 Added DEVELOP DMG styling. Improved TEST-RELEA...
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2020-04-06
Ben Soares
JAL-3577 Fixed Jalview Programme Group in Windows menu...
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2020-04-06
Jim Procter
JAL-3407 redact java 8 incompatible type inference
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2020-04-06
gmungoc
JAL-3581 no hidden sequence marker if hidden markers...
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2020-04-06
Jim Procter
JAL-3407 updated release date to Thursday 9th April...
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2020-04-06
gmungoc
JAL-3581 no hidden sequence marker if hidden markers...
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2020-04-06
Ben Soares
JAL-3577 Moved application Categories for freedesktop...
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2020-04-06
gmungoc
Merge branch 'develop' into Jalview-JS/develop
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2020-04-06
Ben Soares
JAL-3577 removed debugging
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2020-04-06
Ben Soares
Merge branch 'task/JAL-3577_Jalview_Test_installers...
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2020-04-06
Ben Soares
JAL-3577 Added existing and new Application IDs for...
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2020-04-06
gmungoc
JAL-3579 no Feature Editor if features not shown
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2020-04-06
Ben Soares
JAL-3577 Changed shortName to INTERNAL_ID
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2020-04-05
Ben Soares
JAL-3577 Changed Windows internal ID to a new value...
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2020-04-05
Ben Soares
JAL-3577 Changed Windows internal ID to a new value...
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2020-04-04
Ben Soares
JAL-3577 Added DS_Store for Test release to look like...
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2020-04-03
Ben Soares
JAL-3577 Added a jalviewt scheme ONLY to TEST-RELEASE...
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2020-04-03
Ben Soares
JAL-3577 cleaned up old DMG files. Added NON-RELEASE...
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2020-04-02
Ben Soares
JAL-3577 First attempt at new folder names
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2020-04-02
Ben Soares
JAL-3572 Added getdown Implementation-Version to getdow...
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2020-04-02
Ben Soares
Merge branch 'improvement/JAL-3394_added_categories_to_...
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2020-04-01
soares
JAL-3438 Added spotless task to use the utils/eclipse...
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