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jalview.git
2017-11-29 kjvdheideJAL-2844 added grouping to alignment panel based on... commit | commitdiff | tree | snapshot
2017-11-29 kjvdheideJAL-2844 start on colouring back onto the alignment commit | commitdiff | tree | snapshot
2017-11-29 kjvdheideJAL-2844 added colouring to partition selection commit | commitdiff | tree | snapshot
2017-11-28 kjvdheideJAL-2844 added offset to x coord to make it equal 0... commit | commitdiff | tree | snapshot
2017-11-28 kjvdheideMerge remote-tracking branch 'origin/develop' into... commit | commitdiff | tree | snapshot
2017-11-28 kjvdheideJAL-2844 first go at partitioning, based on actual... commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterJAL-2740 release notes commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2740' into develop commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterJAL-2827 release notes commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2827' into develop commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterJAL-2842 release notes commit | commitdiff | tree | snapshot
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2842' into develop commit | commitdiff | tree | snapshot
2017-11-27 Jim ProcterJAL-2851 JAL-2858 release notes for 2.10.3b1 commit | commitdiff | tree | snapshot
2017-11-27 Jim ProcterMerge branch 'bug/JAL-2851' into develop commit | commitdiff | tree | snapshot
2017-11-27 kjvdheideJAL-2852 JAL-2853 forester update commit | commitdiff | tree | snapshot
2017-11-27 kjvdheideJAL-2844 added selection threshold (non-adjusted calcul... commit | commitdiff | tree | snapshot
2017-11-27 kjvdheideJAL-2799 re-enabled change listener for Aptx's tabs... commit | commitdiff | tree | snapshot
2017-11-27 kjvdheideJAL-2844 line drawing at mouse click added on top of... commit | commitdiff | tree | snapshot
2017-11-27 kjvdheideJAL-2853 colours now enabled by default in Aptx commit | commitdiff | tree | snapshot
2017-11-26 kjvdheideJAL-2847 first rough attempt at loading in via database ID commit | commitdiff | tree | snapshot
2017-11-24 kjvdheideJAL-2799 rearranged AptxInit code commit | commitdiff | tree | snapshot
2017-11-24 kjvdheideJAL-2799 ALL trees are now loaded in as separate Aptx... commit | commitdiff | tree | snapshot
2017-11-24 kjvdheideJAL-2794 binding now exclusively supports single tab... commit | commitdiff | tree | snapshot
2017-11-24 kjvdheideMerge branch 'kjvdh/features/PhylogenyViewer' of https... commit | commitdiff | tree | snapshot
2017-11-24 kjvdheideJAL-2838 start on sorting commit | commitdiff | tree | snapshot
2017-11-24 kjvdheideJAL-2838 made getAssociatedPanels public commit | commitdiff | tree | snapshot
2017-11-23 kiramtMerge branch 'develop' into bug/JAL-2851 bug/JAL-2851 commit | commitdiff | tree | snapshot
2017-11-23 kiramtJAL-2851 Fix merge error breaking vertical scrolling commit | commitdiff | tree | snapshot
2017-11-22 kjvdheideJAL-2794 reworked, everything routes via avport.sendsel... commit | commitdiff | tree | snapshot
2017-11-22 kjvdheideJAL-2794 removed several redundancies in the binding... commit | commitdiff | tree | snapshot
2017-11-22 kjvdheideJAL-281 fixed misplaced quote in example text commit | commitdiff | tree | snapshot
2017-11-22 kjvdheideJAL-2844 mouse press code rearranged to prepare for... commit | commitdiff | tree | snapshot
2017-11-22 kjvdheideJAL-2847 small things, filled in actionperformeds commit | commitdiff | tree | snapshot
2017-11-22 kjvdheideJAL-2799 fixed selections not carrying over to tabs... commit | commitdiff | tree | snapshot
2017-11-21 kjvdheideJAL-2847 added database menu items and listeners commit | commitdiff | tree | snapshot
2017-11-21 kjvdheideMerge remote-tracking branch 'origin/releases/Release_2... commit | commitdiff | tree | snapshot
2017-11-21 kjvdheideJAL-281 added string label for loading from database commit | commitdiff | tree | snapshot
2017-11-20 Jim ProcterJAL-2698 only allow InstallAnywhere launches with versi... commit | commitdiff | tree | snapshot
2017-11-20 kjvdheideMerge remote-tracking branch 'origin/releases/Release_2... commit | commitdiff | tree | snapshot
2017-11-20 Jim ProcterJAL-2698 patch path for InstallAnywhere build. Webstart... commit | commitdiff | tree | snapshot
2017-11-20 kjvdheideJAL-2799 JAL-2805 JAL-281 multiple trees can now be... commit | commitdiff | tree | snapshot
2017-11-20 kjvdheideJAL-281 added history box to tree url input window commit | commitdiff | tree | snapshot
2017-11-20 kjvdheideJAL-281 option pane with error handling for selecting... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 tidy release notes and whats new commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2805 code refactor (actionPerformed cleaned up... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 source code licencing commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 tidy up release notes commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2805 reorganized code, tree building goes through... commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2795 removed unneeded distancematrix length/width... commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2844 changed Aptx config to make all cladogram... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 Cached PDB Entries -> Cached Structures in... commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2466 revised help text for sort by PID commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 what’s new and release notes commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideMerge branch 'kjvdh/features/PhylogenyViewer' of commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2822 known defect for 2.10.3 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2784' into develop commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2841 JAL-2791 new known defect

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2017-11-17 Jim ProcterJAL-2541 known defect commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-2805 couple of method name changes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2684 clarify release notes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2821' into develop commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2840 release notes commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2837' into develop commit | commitdiff | tree | snapshot
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 bug/JAL-2837 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'doc/JAL-2494_JAL-2828_mergefindAnnotation... commit | commitdiff | tree | snapshot
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2811 release note commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2541 not in 2.10.3, JAL-2831 signed off. commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterJAL-2698 11th hour release today commit | commitdiff | tree | snapshot
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2831' into develop commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-281 added menu items and listeners to load from... commit | commitdiff | tree | snapshot
2017-11-17 kjvdheideJAL-281 changed load associated tree GUI item to menu... commit | commitdiff | tree | snapshot
2017-11-16 Jim ProcterJAL-2541 JAL-2829 JAL-2830 JAL-2822 catch all release... commit | commitdiff | tree | snapshot
2017-11-16 Jim ProcterMerge branch 'bug/JAL-2829deleteCharsWithGaps' into... commit | commitdiff | tree | snapshot
2017-11-16 kiramtJAL-2831 Removed unwanted hidden sequences checks bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-16 kjvdheideJAL-2805 expanded tree and treenode interfaces commit | commitdiff | tree | snapshot
2017-11-16 kjvdheideJAL-2805 loads of file reorganizing, interfaces expanded commit | commitdiff | tree | snapshot
2017-11-16 kiramtJAL-2842 remove infinite loop in cursor move bug/JAL-2842 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2831 Don't show cursor if position in hidden region commit | commitdiff | tree | snapshot
2017-11-15 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2811 Updated following review bug/JAL-2811 commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2840 fix wrapped scrolling when using cursor at... commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2834 JAL-2836 temporarily disabled wrapped mode... commit | commitdiff | tree | snapshot
2017-11-15 kjvdheideJAL-2805 functional binding on loading associated trees commit | commitdiff | tree | snapshot
2017-11-15 kiramtJAL-2831 ported to applet commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 tidies and tests commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 viewport is passed along to the tree parser commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2795 added duplication check when calculated nodes... commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 added getters for hashmaps filled with associa... commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 added static method for logging duplications... commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 more sensible interface method params commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 tidy commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 finished up interface comments commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 re-enabled one2many checks commit | commitdiff | tree | snapshot
2017-11-14 kjvdheideJAL-2805 interface comments, progress on associating... commit | commitdiff | tree | snapshot
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831 commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Changed to overlay on via graphics context... commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Missed commit commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2811 Made it work for hidden columns/seqs too commit | commitdiff | tree | snapshot
2017-11-14 kiramtJAL-2831 Attempt at cursor fix for wrapped mode commit | commitdiff | tree | snapshot
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