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jalview.git
2020-03-16
gmungoc
JAL-3551 the correct PyMOL colour by chain command
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2020-03-13
gmungoc
JAL-3551 working proof of concept of Jalview driving...
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2020-03-09
gmungoc
Merge branch 'develop' into feature/JAL-2422ChimeraX
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2020-03-09
gmungoc
JAL-3528 unit tests added for failed lookup, Javadoc
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2020-03-09
gmungoc
JAL-3407 3549 in release notes
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2020-03-09
gmungoc
JAL-3549 JAL-3305 no Sort By Score / Density if no...
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2020-03-09
gmungoc
JAL-3412 update layout whenever desired id width changes
testbuild/JAL-3412_getIdWidth_test
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2020-03-06
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2020-03-06
gmungoc
JAL-3187 unit test for findComplementFeaturesAtResidue
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2020-03-06
Ben Soares
JAL-3394 getdown jar files had not been re-compiled
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2020-03-06
gmungoc
JAL-3407 added 3468 to release notes
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2020-03-06
gmungoc
Merge branch 'feature/JAL-3468featureDescriptionEllipsi...
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2020-03-06
gmungoc
JAL-3468 i18n and additional unit tests
feature/JAL-3468featureDescriptionEllipsis
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2020-03-06
gmungoc
JAL-3407 release note tweaks, added 3533 3538 3534...
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2020-03-04
Ben Soares
JAL-3468 small tidy
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2020-03-04
Ben Soares
JAL-3468 improvement to feature description truncation...
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2020-03-04
Ben Soares
JAL-3468 Fixed tests and added test for max-length...
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2020-03-04
Ben Soares
JAL-3468 Obsessively fixed self-closing <br/> tags
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2020-03-03
soares
JAL-3468 Adapted methods to report how many features...
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2020-03-03
gmungoc
JAL-3158 superseded superposeStructures methods removed
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2020-03-03
gmungoc
JAL-3518 more pull up / test coverage of structure...
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2020-03-03
Jim Procter
Merge branch 'groovy/JAL-3547_conservationsequenceexpor...
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2020-03-03
Jim Procter
JAL-3547 groovy script to get the conservation sequence...
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2020-03-02
Jim Procter
JAL-3407 redact Java 8 incompatible '<>' with anonymous...
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2020-02-29
gmungoc
JAL-3518 correct override for ChimeraX colour by residues
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2020-02-28
gmungoc
JAL-3518 basic refactoring / pull up of superposeStruct...
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2020-02-27
Jim Procter
Merge branch 'bug/JAL-3412idWidthDiscrepancy' into...
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2020-02-27
Jim Procter
JAL-3407 release notes for JAL-3412
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2020-02-27
Jim Procter
JAL-3412 patch for failing test
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2020-02-27
Jim Procter
Merge branch 'bug/JAL-3412idWidthDiscrepancy' into...
bug/JAL-3412idWidthDiscrepancy
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2020-02-27
Jim Procter
JAL-3407 JAL-3296 release notes
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2020-02-27
Jim Procter
Merge branch 'bug/JAL-3296changeStartInvalidateCursor...
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2020-02-26
Jim Procter
JAL-3477 jalview.jvmmemmax / jvmmemmax maximum value...
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2020-02-26
Jim Procter
Merge branch 'bug/JAL-3477_memory_max_allocation' into...
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2020-02-26
Jim Procter
JAL-3407 release notes for JAL-3449 JAL-3393 JAL-3420...
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2020-02-26
Jim Procter
Merge branch 'improvement/JAL-3449_add_install4j_instal...
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2020-02-26
Jim Procter
JAL-3541 docs for enabling OpenClover coverage reports...
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2020-02-26
Jim Procter
JAL-3541 removed clover report generation debug flag...
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2020-02-26
Jim Procter
JAL-3541 configurables for clover report generation...
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2020-02-25
Jim Procter
JAL-3541 track own jalview.gui.Desktop clover source...
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2020-02-25
Jim Procter
JAL-3541 2g heap for clover xml and clover html - remov...
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2020-02-25
Jim Procter
JAL-3541 add verbose and heap setting for HTML Report...
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2020-02-25
Jim Procter
JAL-3541 use javaExec to run clover tasks
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2020-02-21
Jim Procter
Merge branch 'bug/JAL-3536getCrossrefTwice' into develop
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2020-02-21
gmungoc
JAL-3518 more extraction of ChimeraX commands as overrides
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2020-02-21
Jim Procter
JAL-3186 ensure transparency slider position is updated...
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2020-02-21
Jim Procter
JAL-3186 avoid repainting twice in splitframe
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2020-02-21
Jim Procter
Merge branch 'features/JAL-3187_uitweaks' into develop
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2020-02-21
Jim Procter
Merge branch 'develop' into features/JAL-3187_uitweaks
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2020-02-21
gmungoc
JAL-2422 tidy of methods and parameters
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2020-02-21
gmungoc
JAL-2422 general pull-up/removal of common or unused...
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2020-02-20
Jim Procter
JAL-3187 nice to have enabling/disabling of apply/cance...
features/JAL-3187_uitweaks
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2020-02-20
Jim Procter
JAL-3187 i18n
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2020-02-20
Jim Procter
JAL-3187 use the recommended way of catching tab select...
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2020-02-20
gmungoc
JAL-3187 repaint complement after loading on features
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2020-02-20
Jim Procter
JAL-3187 individual feature settings panel has revert...
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2020-02-20
gmungoc
JAL-2422 pull-up refactoring of structure commands...
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2020-02-19
Jim Procter
JAL-3187 i18n for titles in windows/tabs
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2020-02-19
Jim Procter
JAL-3535 todo re titles for CDS and Protein views in...
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2020-02-19
Jim Procter
JAL-3187 - tabbed pane is nulled when feature settings...
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2020-02-19
Ben Soares
Merge branch 'develop' into improvement/JAL-3449_add_in...
improvement/JAL-3449_add_install4j_installer_getdown_versions_to_jalview_console.2
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2020-02-19
Ben Soares
JAL-3289 Improved the name of the channel_launch.jvl...
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2020-02-19
Jim Procter
JAL-3187 JAL-2764 close feature settings when parent...
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2020-02-19
Ben Soares
Merge branch 'develop' of https://source.jalview.org...
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2020-02-19
Ben Soares
JAL-3337 Adding .settings/org.eclipse.jdt.core.jalview...
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2020-02-19
Jim Procter
Merge branch 'patch/JAL-3538_fontantialiasingbydefault...
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2020-02-19
Jim Procter
JAL-3538 JAL-3407 release notes
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2020-02-19
Jim Procter
JAL-3407 release next week :D
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2020-02-19
Jim Procter
JAL-3538 anti-aliasing enabled by default
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2020-02-19
Ben Soares
JAL-3449 helper task to perform getdown digest on any dir
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2020-02-19
Ben Soares
JAL-3449 ensuring latest getdown jar files after merge
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2020-02-18
Ben Soares
JAL-3449 merge from develop
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2020-02-18
Jim Procter
JAl-3187 JAL-3535 JAL-3534 update open feature settings...
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2020-02-18
Mungo Carstairs
JAL-3536 JAL-3187 don't create duplicate CDS-to-protein...
bug/JAL-3536getCrossrefTwice
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2020-02-17
Ben Soares
JAL-3341 Increase number of lines looked at by test...
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2020-02-17
Ben Soares
JAL-3289 Added option and documentation for a TEST...
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2020-02-17
Ben Soares
JAL-3289 Updated doc/building.md to explain possible...
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2020-02-17
Ben Soares
JAL-3252 download-jres.sh helper script for keeping...
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2020-02-17
Jim Procter
JAL-3536 failing test and test data
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2020-02-17
Jim Procter
JAL-3534 patch for simple case (Protein or Nucleotide...
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2020-02-17
Ben Soares
JAL-3252 tgz unpacking no longer needed by getdown...
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2020-02-17
Jim Procter
JAL-3187 fix for JAL-3533 on CDS/Protein tabbed feature...
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2020-02-17
Jim Procter
JAL-3187 JAL-3533 JAL-3535 set feature settings dialog...
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2020-02-17
Jim Procter
JAL-3187 better semantics for feature settings closed...
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2020-02-14
Ben Soares
JAL-3394 A little streamlining and fixing of helper...
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2020-02-14
Ben Soares
JAL-3394 remove no longer used files
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2020-02-14
Jim Procter
JAL-3187 alternative solution - gather feature settings...
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2020-02-14
Jim Procter
JAL-1354 JAL-3528 fix bug from b594d516dac69eebcccdc743...
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2020-02-13
Ben Soares
JAL-3449 getdown resilience change to launcher classpat...
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2020-02-13
Ben Soares
JAL-3227 helper shell scripts for setting up a build...
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2020-02-13
Ben Soares
JAL-3449 fix a getdownAppDir error introduced in previo...
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2020-02-13
Ben Soares
JAL-3449 More tidying of build.gradle for CHANNEL selection
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2020-02-12
Jim Procter
JAL-3187 applet alignFrame needs new api method
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2020-02-12
Jim Procter
JAL-3187 first stab at ‘show CDS/Protein Settings’...
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2020-02-12
Jim Procter
JAL-3187 view controller UI api method to show feature...
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2020-02-12
Jim Procter
JAL-3187 convenience method on SplitContainerI to retri...
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2020-02-12
Jim Procter
JAL-1354 JAL-3528 report missing keys for MessageManage...
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2020-02-12
Jim Procter
JAL-3407 release notes for JAL-3121
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2020-02-12
Ben Soares
JAL-3289 Updated doc/building.md to explain possible...
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2020-02-12
Ben Soares
JAL-3523 No longer change CWD of getdown when invoked...
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