jalview.git
2005-04-14 jprocteradded quality calculation from Jalview118, and scale...
2005-04-13 jprocterGap characters are now properly detected in the conserv...
2005-04-13 jprocterFixed so that all alternate residues are used to calcul...
2005-04-13 jprocterAdded order-preservation for clustalW alignment. No...
2005-04-13 amwaterhousesortByTreeMenu added
2005-04-13 amwaterhouseuse AlignFrame.NEW_WINDOW_WIDTH
2005-04-13 amwaterhousegetTree method added
2005-04-13 amwaterhouseif not active tree, colour threshold grey
2005-04-13 amwaterhouseuse NEW_WINDOW_WIDTH
2005-04-13 amwaterhouseinvalidate alignPanel before changing size
2005-04-13 amwaterhousenew constructor for addtodesktop, sliders set to top...
2005-04-13 amwaterhousedraws last residue
2005-04-13 amwaterhouserepainting issues fixed
2005-04-13 amwaterhousetreeMenuItem added, conservation sliders, finder top...
2005-04-11 jprocteradded the alignment quality calculation from the old...
2005-04-11 jprocterConservation symbols : + = all props are conserved...
2005-04-11 jprocterFixed the job-failed message.
2005-04-11 jprocterNow tries to set viewing parameters for distances and...
2005-04-08 jprocterslight mods again.
2005-04-08 amwaterhousetry out spinning logo
2005-04-08 amwaterhousereturn from painting if size is 0
2005-04-08 amwaterhousePrinting wrapped alignment corrected
2005-04-08 amwaterhouseDisplay of wrapped search results corrected
2005-04-08 amwaterhouseendREs -1
2005-04-08 amwaterhouseconservation changed to quality
2005-04-08 amwaterhouseclear the last area in fast paint
2005-04-08 amwaterhousescale above, left right added
2005-04-08 amwaterhousebug adding null sequence to selection fixed
2005-04-08 amwaterhousereads fasta files from uniprot web page
2005-04-08 amwaterhousescale above, left rigt added
2005-04-08 jprocterWebStartLocation form.
2005-04-08 jproctertrival.
2005-04-08 jprocterFixed broken jnlp creation.
2005-04-08 jprocterremember: do not check in quick bug fixes that you...
2005-04-08 jprocterrecent rebuild of the JPred client from WSDL2Java
2005-04-08 jprocterAlignment quality with funky coloured histograms.
2005-04-08 jprocterupdated build strategy and checking for portability.
2005-04-07 amwaterhouseno more group editor
2005-04-07 amwaterhousecheck annotation label widths as well as id widths
2005-04-07 amwaterhousecalls repaint, not just refreshpanels
2005-04-07 amwaterhousefor now, draw selection box bottom -1
2005-04-07 amwaterhouseseals selection box if at bottom of alignment
2005-04-07 amwaterhousedraws threshold position according to threshold, not...
2005-04-07 amwaterhouseno longer used
2005-04-07 amwaterhouseRemove paintFlag ref
2005-04-07 amwaterhouseGRPAH_HEIGHT variable
2005-04-07 amwaterhousecheckfor gap characters
2005-04-07 amwaterhousepaintFlag removed
2005-04-07 amwaterhousefastPaint flag added
2005-04-07 amwaterhousereomve call to repaint
2005-04-07 amwaterhousefind top and bottom of group
2005-04-07 amwaterhouseadd note about desktopManager
2005-04-07 amwaterhouseadd fastPaint boolean
2005-04-07 amwaterhouseremove setdecorated line
2005-04-07 amwaterhouseamino acid gifs
2005-04-06 amwaterhousedont draw first block if colour is null
2005-04-06 amwaterhousefill in the gaps
2005-04-06 amwaterhousesetDesktopManager(new)
2005-04-06 amwaterhousepaint is now in drawComponent
2005-04-06 amwaterhouseshowAnnotation added
2005-04-06 amwaterhouseannoation in print version
2005-04-06 amwaterhouseDONT SHOW ANNOTATIONS IF WRAPPED
2005-04-06 jprocternext version of Jpred functionality using new client...
2005-04-06 jprocterNew method for helping to quickly map different aligned...
2005-04-06 jprocterNew client code for JPred service includes return of...
2005-04-06 amwaterhousemosueOver graph gives int, not float
2005-04-06 amwaterhouseFast paint method implemented
2005-04-01 amwaterhouseAlignment Annotation added
2005-04-01 amwaterhouseignore jnetconf
2005-04-01 amwaterhouseparses jpredfile into new alignment annotation
2005-04-01 amwaterhouseupdate conservation and consensus
2005-04-01 amwaterhouseanti_aliasing on
2005-04-01 amwaterhouseUses conservation graph
2005-04-01 amwaterhousetesting Graphics2D
2005-04-01 amwaterhousesetMaximizable(false)
2005-04-01 amwaterhouseBuild date determination
2005-03-31 jprocterdoh - stupid jim.
2005-03-31 jprocterutility classes used in build.xml, and a dodgy perl...
2005-03-31 jprocterJavaC target set to 1.4 for proper compilation of 1...
2005-03-31 jprocterAdded a flag to control if the "/<seq_start>-<seq_end...
2005-03-31 jprocteradded a an axis log4j appender property to the jalview...
2005-03-30 jprocternew libraries for soap bits.
2005-03-30 jprocterfixed the log4j messages.
2005-03-30 jproctercleaned up some comments and exception messages.
2005-03-30 jprocterUpdated version of axis to fix the j1.5 webstart problems.
2005-03-30 jprocterFixed a sensible default leaf distance (for files where...
2005-03-24 amwaterhousefix printing error
2005-03-23 amwaterhousenew seq selection -1
2005-03-23 amwaterhouseadjustForRemoveLeft / Right added
2005-03-23 amwaterhouseworks even if col is 1 residue
2005-03-23 amwaterhousereads MSF files even if PILEUP is missing
2005-03-23 amwaterhousedrawableSequence removed
2005-03-23 amwaterhouseno longer used
2005-03-23 amwaterhousesecondarycolour not used
2005-03-23 amwaterhouseadd .fasta to save dialog
2005-03-23 amwaterhousecorrect wrap alignment scrollbar size
2005-03-23 amwaterhouseresetSeqLimits altered
2005-03-23 amwaterhouseoverride showSaveDialog to prompt user if file exists
2005-03-22 amwaterhouseput bioinformatics into message
2005-03-22 amwaterhousedrag and drop files into jalview
next