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jalview.git
2022-08-08
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
Release_2_11_2_4
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2022-08-08
Jim Procter
JAL-4046 release on 9th August 2022
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2022-08-08
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-08-08
Jim Procter
JAL-4046 JAL-3993 imports reformatting
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2022-08-08
Jim Procter
JAL-4046 JAL-3993 patch for 2.11.2.4 release
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2022-08-08
Jim Procter
JAL-4046 release notes for JAL-3991
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2022-08-08
Jim Procter
Merge branch 'task/JAL-3991_check_actual_JAVA_VERSION_a...
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2022-08-08
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-08-08
Jim Procter
JAL-4046 release notes for JAL-4014 - gecos colourschemes
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2022-08-08
Jim Procter
Merge branch 'improvement/JAL-4014_gecos_colour_schemes...
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2022-08-08
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-08-08
Jim Procter
JAL-4056 documented in release notes for JAL-4043
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2022-08-08
Jim Procter
Merge branch 'patch/JAL-4036_uniprot_fts_legacy_endpoin...
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2022-08-08
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-08-08
Jim Procter
JAL-4043 what’s new, updated help images and release...
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2022-08-08
Jim Procter
JAL-4034 show the loading spinner when switching betwee...
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2022-08-08
Jim Procter
Merge branch 'features/JAL-4034_improve_3dbeacons_butto...
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2022-08-01
Ben Soares
JAL-4056 fixed tl;dr section of doc/building.md
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2022-07-26
Ben Soares
JAL-4036 Fixed the virus_host_id query field
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2022-07-26
Ben Soares
JAL-4036 Added text to help about different number...
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2022-07-25
Ben Soares
JAL-4036 updated help about new UniProt API
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2022-07-25
Ben Soares
JAL-4036 moved a comment block
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2022-07-25
Ben Soares
JAL-4034 button looks better also on other OSes with...
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2022-07-24
Ben Soares
JAL-4034 add round corners to 3DB confirmation button...
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2022-07-22
Ben Soares
JAL-4036 Changes made from code review CR-JAL-265
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2022-07-22
Ben Soares
JAL-4036 Add getDbName to the GFTSPanelI and add an...
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2022-07-22
Ben Soares
JAL-4036 removing the query field code from the dropdow...
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2022-07-21
Ben Soares
JAL-4036 Don't autosearch changing index when autosearc...
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2022-07-21
Ben Soares
JAL-4036 add search fieldname to dropdown list
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2022-07-21
Ben Soares
JAL-4036 removed often duplicated pluralisation in...
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2022-07-21
Ben Soares
JAL-4036 New configuration, target and pagination proce...
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2022-07-20
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-07-20
Jim Procter
JAL-4046 started release notes for 2.11.2.4 patch release
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2022-07-20
Jim Procter
JAL-4045 - don't apply distribution dependent scale...
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2022-07-15
Ben Soares
JAL-4034 Use the new non-modal JDialog for 3DBeacons...
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2022-07-15
Ben Soares
JAL-4034 Allow request for non-modal JDialog, which...
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2022-07-12
Ben Soares
JAL-4034 change to jalview property name
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2022-07-12
Ben Soares
JAL-4034 showConfirmDialog works for both desktop and...
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2022-07-11
Ben Soares
JAL-4034 Non-blocking 3D Beacons query after warning...
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2022-07-11
Ben Soares
JAL-4034 allow a jalview_property to set the threshold...
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2022-07-05
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
Release_2_11_2_3
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2022-07-05
Jim Procter
JAL-4012 release date bump and JAL-4004 tweak to includ...
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2022-07-04
Jim Procter
JAL-4034 fix #3 change uniprot ref fetch dialog to...
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2022-07-04
Jim Procter
JAL-4034 Fix #2 show an icon and a button to press...
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2022-07-04
Jim Procter
JAL-4034 fix 1 - reword button
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2022-07-04
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-07-04
Jim Procter
JAL-4012 updated release date and whats new for 2.11.2.3
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2022-07-01
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-07-01
Jim Procter
JAL-4012 tweak release notes wording for legacy.uniprot
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2022-07-01
Jim Procter
Merge branch 'patch/JAL-4036_uniprot_fts_legacy_endpoin...
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2022-07-01
Jim Procter
JAL-4036 JAL-4012 note about Uniprot FTS workaround...
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2022-06-30
Jim Procter
JAL-4036 use the legacy endpoint (and report the FTS...
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2022-06-28
Ben Soares
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS...
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2022-06-28
Ben Soares
JAL-1988 Don't put Quit in the File menu if there's...
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2022-06-23
Ben Soares
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS...
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2022-06-23
Ben Soares
JAL-1988 Check for setHandler capability to avoid About...
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2022-06-17
Ben Soares
JAL-3027 Avoid FlatLAF Desktop class is JalviewJS
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2022-06-15
Jim Procter
JAL-4012 release notes for JAL-1988,JAL-3416
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2022-06-15
Jim Procter
JAL-1988 JAL-3416 avoid unnecessary static flag
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2022-06-15
Jim Procter
JAL-3418 JAL-1988 don’t need java version check anymore
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2022-06-15
Jim Procter
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS...
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2022-06-13
Ben Soares
JAL-1988 Hack to ensure Quit dialog box is moved to...
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2022-06-13
Ben Soares
JAL-1988 Moved APQHandlers to jalview.jbgui and called...
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2022-06-13
Ben Soares
Merge branch 'develop' into improvement/JAL-1988+JAL...
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2022-06-13
Ben Soares
JAL-4004 Fix missing whatsNew.html when not building...
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2022-06-13
Jim Procter
Merge branch 'improvement/JAL-1988+JAL-3416_flatlaf_osx...
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2022-06-13
Jim Procter
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS...
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2022-06-13
Ben Soares
JAL-3416 remove flat as default for linux
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2022-06-13
Ben Soares
JAL-1988 JAL-3416 Using the flatlaf-extras About, Prefe...
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2022-06-13
Ben Soares
JAL-3416 Added some mac specific FlatLAF settings....
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2022-06-13
Ben Soares
JAL-3416 updated FlatLAF libraries to 2.3. Added the...
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2022-06-09
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-06-09
Jim Procter
JAL-4012 - JAL-4020 release notes and a bit of ‘trouble...
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2022-06-09
Jim Procter
Merge branch 'bug/JAL-4020_add_pymolwin_paths' into...
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2022-06-09
Jim Procter
JAL-4004 add the autogenerated whatsNew.html and releas...
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2022-06-09
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-06-09
Jim Procter
JAL-4014 release notes for JAL-4026 patches
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2022-06-09
Jim Procter
JAL-4026 increase timeouts for command line ops
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2022-06-09
Jim Procter
JAL-4026 ignore StructureSelectionManager events if...
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2022-06-09
Jim Procter
JAL-4026 always wait 50ms before checking if the calcul...
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2022-06-09
Jim Procter
JAL-4026 update the viewport’s wrapped width after...
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2022-06-08
Jim Procter
Merge branch 'develop' into releases/Release_2_11_2_Branch
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2022-06-08
Jim Procter
JAL-4014 release notes for JAL-4023 and JAL-4024
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2022-06-08
Jim Procter
Merge branch 'improvement/JAL-4023_snotation_for_trees...
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2022-06-08
Jim Procter
Merge branch 'patch/JAL-4024_jumpScrollHang' into develop
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2022-06-08
Jim Procter
JAL-4012 what’s new and release notes (in the new style...
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2022-06-08
Jim Procter
JAL-4004 delete temporary file mistakenly checked in
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2022-06-08
Jim Procter
Merge branch 'issues/JAL-3553+JAL-3978+JAL-3989+JAL...
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2022-06-08
Jim Procter
JAL-4024 only render partially when new view overlaps...
patch/JAL-4024_jumpScrollHang
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2022-06-07
Ben Soares
JAL-4020 class formatting
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2022-06-07
Ben Soares
JAL-4020 added the \Scripts\pymol.exe. to the pathList
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2022-06-06
Ben Soares
JAL-4020 Added the +2 arg for PyMOLWin.exe allowing...
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2022-06-06
Ben Soares
JAL-4020 updated tests
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2022-06-06
Ben Soares
JAL-4020 class reformatting
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2022-06-06
Ben Soares
JAL-4020 Added path search for global installation...
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2022-06-06
Jim Procter
JAL-4023 use %g for distances (scientific notation...
improvement/JAL-4023_snotation_for_trees
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2022-06-06
Ben Soares
JAL-4020 Added search for PyMOLWinWithConsole.bat ...
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2022-06-06
Jim Procter
JAL-4023 store distances as doubles
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2022-05-12
Ben Soares
Merge branch 'develop' into issues/JAL-3553+JAL-3978...
issues/JAL-3553+JAL-3978+JAL-3989+JAL-4004_merged_with_develop
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2022-05-12
Ben Soares
JAL-4014 4 gecos colour schemes added to help documentation
improvement/JAL-4014_gecos_colour_schemes
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