jalview.git
2005-09-22 amwaterhouseDont calculate conservation for nucleotides
2005-09-22 amwaterhouseisNucleotide
2005-09-22 amwaterhouseCreate instance of FormatAdapter
2005-09-22 amwaterhouseAdd nucleotide names
2005-09-22 amwaterhouseDisplay nucleotides
2005-09-22 amwaterhouseBreak if regex not found
2005-09-22 amwaterhouseIf Mac user hasnt selected file format, give warning
2005-09-22 amwaterhouseWrap alignment with annotations
2005-09-22 amwaterhouseCheck if filefilter is null
2005-09-21 amwaterhouseJalview
2005-09-21 amwaterhouseSequences must be aligned before PCA
2005-09-21 amwaterhouseNext active Frame losing focus bug fixed
2005-09-20 amwaterhouseUse gtk icons
2005-09-20 amwaterhouseGTK icons
2005-09-20 amwaterhouseAdd carriage return after memory settings
2005-09-20 amwaterhouseChecks end of sequence before drawing text
2005-09-20 amwaterhouseFormat label left align
2005-09-20 amwaterhouseOptimise copy image
2005-09-20 amwaterhousePCAPanel checks viewport selection group
2005-09-20 amwaterhousePCAPanel checks viewport selection
2005-09-20 amwaterhousePCAPanel just requires viewport
2005-09-20 amwaterhouseHelp gets bounds from help map file
2005-09-20 amwaterhouseNew methods in treePanel
2005-09-20 amwaterhouseNull pointer if user presses shift before anything...
2005-09-20 amwaterhouseAlign labels format left
2005-09-20 amwaterhouseOptimise graphics copy object
2005-09-20 amwaterhouseUse selectionGroup to find chosen sequences
2005-09-20 amwaterhouseMake sure fontmetrics is not null
2005-09-19 amwaterhouseMake sure fontmetrics exists for headless state
2005-09-19 amwaterhouseDont add ServiceListeners if desktop is null
2005-09-19 amwaterhouseAlignment of node labels modified
2005-09-19 amwaterhouseShowDistances, placeHolders and bootstraps have their...
2005-09-16 amwaterhouseCheck image is not null in fast paint
2005-09-16 amwaterhouseSet distanceMenu selected true
2005-09-15 amwaterhouseMemory settings added to help
2005-09-15 amwaterhouseCorrect date Release_2_05b
2005-09-15 jprocterFixed so job submission and job failure errors are...
2005-09-15 amwaterhouseCopy uses fasta format
2005-09-15 amwaterhouse2.05b
2005-09-15 amwaterhouseAdd Uracil as X unknown
2005-09-15 amwaterhouseOptionPane warning for out of memory
2005-09-15 amwaterhouseremove system.out
2005-09-15 amwaterhouseRemove key listener
2005-09-15 amwaterhouseDont add time to build date
2005-09-15 amwaterhouseAdd main-class to jar files
2005-09-15 amwaterhouseUse equalsIgnoreCase
2005-09-15 amwaterhouseApplet has main method, excutable
2005-09-15 amwaterhouseLogger moved to prefs so that class not found error...
2005-09-14 amwaterhousePreferences updated
2005-09-14 amwaterhouseMove bootStrap/distance settings outside thread
2005-09-14 amwaterhouseAdd end of consensus test for wrapped edit
2005-09-14 amwaterhousefullSeqId should follow preference value
2005-09-14 amwaterhouseMake new frame selected
2005-09-14 amwaterhouseRemove system out tests
2005-09-14 amwaterhouseCopy and paste uses FASTA format
2005-09-14 amwaterhouseCall methods in treeCanvas on init
2005-09-14 amwaterhouseoffy changes
2005-09-14 amwaterhouseOutOfMemory try catch
2005-09-14 amwaterhouseUse font size, not font height
2005-09-14 amwaterhouseResize for mac
2005-09-14 amwaterhouseUse getTreeFont instead of getFont
2005-09-14 amwaterhouseadd fontname, size and style for trees
2005-09-14 amwaterhouseFont change instead of font size
2005-09-14 amwaterhouseAdd Export tab
2005-09-14 amwaterhouseMake button protected
2005-09-14 amwaterhouseuse fontchooser to change fonts
2005-09-14 amwaterhouseCenter labels
2005-09-14 amwaterhouseSave fonts for trees
2005-09-14 amwaterhouseChange fonts in Treepanel
2005-09-14 amwaterhouseAdd header
2005-09-14 amwaterhouseSystem.gc after outofmemory
2005-09-14 amwaterhousePCA is in outofmemory try-catch
2005-09-14 amwaterhouseTreeFont added, binding rebuilt
2005-09-13 amwaterhouseDont respond to mouse movements if alignment wrapped
2005-09-13 amwaterhouseGive focus to textarea on startup
2005-09-13 amwaterhouseEPSOptions added
2005-09-13 amwaterhouseWarn if out of memory
2005-09-12 amwaterhouseRemove gaps in regions, not char by char
2005-09-12 amwaterhouseAlways return true for directories
2005-09-12 amwaterhousenull pointers removed
2005-09-12 amwaterhouseNull pointers removed
2005-09-12 amwaterhouseDont fastpaint if movement is zero
2005-09-12 amwaterhouseUpdate overview after change
2005-09-12 amwaterhouseUpdate overview in alignmentChanged
2005-09-12 amwaterhouseSize checking in drawGraph
2005-09-12 amwaterhouseOverview subsamples alignment
2005-09-08 amwaterhouseMove tree property change to treePanel
2005-09-08 amwaterhouseOnly 1 NJtree
2005-09-08 amwaterhouseTreePanel takes viewport
2005-09-08 amwaterhouseREmove unnecessary imports
2005-09-08 amwaterhouseInit PCA in thread
2005-09-08 amwaterhouseIf no consensus, disable certain colour options
2005-09-08 amwaterhouseupdate consensus and conservation are in try catch...
2005-09-08 amwaterhouseOptimise switch to fastPaint
2005-09-08 amwaterhouseCorrect mouse pressed bug
2005-09-08 amwaterhouseOptimised for wide alignments
2005-09-08 amwaterhouseLoad in a thread
2005-09-08 amwaterhouseMake menuitems protected
2005-09-08 amwaterhouseIf vconsensus is null, return
2005-09-08 amwaterhouseAdd lowercase nucleotides to nucleotideHash
next