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jalview.git
2019-06-26 Jim ProcterMerge branch 'bug/JAL-3330' into develop commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3334 fix - always load full SO to resolve the seque... commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3111 get rid of nasty tab characters commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3332 test to check for duplicate db sources and... commit | commitdiff | tree | snapshot
2019-06-26 Ben SoaresJAL-3130 Added all groovy jars for groovy console commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3330 JAL-3332 relocate and simplify BeforeClass... commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3330 test to verify sub/attributeName array is... commit | commitdiff | tree | snapshot
2019-06-26 Jim ProcterJAL-3330 javadoc commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3330 merge styles onto originating view after fetch... commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3330 dbreffetcher: record any feature display model... commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3330 merge styles onto originating views when show... commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3330 mergeFeatureStyles - needs test coverage commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3111 formatting commit | commitdiff | tree | snapshot
2019-06-24 Jim ProcterJAL-3111 JAL-2069 JAL-2808 documentation for feature... commit | commitdiff | tree | snapshot
2019-06-21 Jim ProcterJAL-3111 added Colour By ID and an overview of Jalview... commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 JAL-2962 JAL-2903 JAL-2986 release notes commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 last final release date for 2.11.0 ! commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 2.11 improvement JAL-3205 JAL-3203 commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 JAL-1424 release notes commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 JAL-2816 docs commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 signed off ’done’ issues in Jira as of now: commit | commitdiff | tree | snapshot
2019-06-20 Jim ProcterJAL-3111 JAL-3130 JAL-3235 Java 11 specific known defec... commit | commitdiff | tree | snapshot
2019-06-19 Jalview Development... JAL-3111 codesign the uninstaller again commit | commitdiff | tree | snapshot
2019-06-19 Ben SoaresMerge branch 'merge/JAL-3310_and_JAL-3300' into develop commit | commitdiff | tree | snapshot
2019-06-19 Ben SoaresJAL-3321 Last pieces of the getdown-launcher.jar upgrad... commit | commitdiff | tree | snapshot
2019-06-19 Ben SoaresJAL-3310 Removing i4jruntime.jar from dist. Not needed... commit | commitdiff | tree | snapshot
2019-06-19 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... commit | commitdiff | tree | snapshot
2019-06-19 Jim ProcterJAL-3111 release notes for JAL-3313 commit | commitdiff | tree | snapshot
2019-06-19 Jim ProcterJAL-3111 formatting
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2019-06-19 Jim ProcterMerge branch 'develop' into documentation/JAL-3111_rele... commit | commitdiff | tree | snapshot
2019-06-19 Jim ProcterJAL-3111 release notes for JAL-27830 JAL-2876 JAL-2567... commit | commitdiff | tree | snapshot
2019-06-19 Ben SoaresJAL-3321 Corrected the badly configured getdown-launche... commit | commitdiff | tree | snapshot
2019-06-18 gmungocJAL-3313 don't double count mapped codons commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... bug/JAL-2830_editManglesDatasetSequence commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 JAL-2446 mentioned in context with NCList... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 JAL-2684 JAL-2360 JAL-2416 release notes commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresMerge branch 'develop' into merge/JAL-3310_and_JAL... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3286 JAL-3111 release notes commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'develop' into documentation/JAL-3111_rele... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterMerge branch 'bug/JAL-3286duplicatePdbQuery' into develop commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 JAL-3003 documentation note commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-2296 JAL-2295 document in release notes post featur... commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 - new known issue JAL-3314 commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 release notes for JAL-3073 JAL-3042 commit | commitdiff | tree | snapshot
2019-06-18 Jim ProcterJAL-3111 JAL-3080 documentation commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresJAL-3310 tidying unecessary files from getdown src... commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresJAL-3312 Fixed SHIFT-CMD/SHIFT-CTRL Key combinations... commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2019-06-18 Ben SoaresMerge branch 'develop' into merge/JAL-3310_and_JAL... commit | commitdiff | tree | snapshot
2019-06-17 Ben SoaresJAL-3310 JAL-3300 two getdown fixes merged commit | commitdiff | tree | snapshot
2019-06-17 Ben SoaresJAL-3310 Remove install4j from getdown-launcher.jar... commit | commitdiff | tree | snapshot
2019-06-17 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... commit | commitdiff | tree | snapshot
2019-06-17 Jim ProcterJAL-3111 rejigged release notes again commit | commitdiff | tree | snapshot
2019-06-17 Jim ProcterJAL-2975,JAL-2647,JAL-1767,JAL-2965, JAL-3111 updated... commit | commitdiff | tree | snapshot
2019-06-14 Ben SoaresJAL-3295 pre-merged code with JAL-3295 branch which... commit | commitdiff | tree | snapshot
2019-06-14 Ben SoaresJAL-3278 A system.out.println turned into a cache.log... commit | commitdiff | tree | snapshot
2019-06-14 Ben SoaresJAL-3300 instant Splash screen on getdown commit | commitdiff | tree | snapshot
2019-06-14 Ben SoaresJAL-3130 added a bit of gradle support for compiling... commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterJAL-3111 release date now 20th June. more release note... commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterJAL-3111 report build type and commit in stdout from... commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterJAL-3299 JAL-3280 javadoc on BuildDetails bean commit | commitdiff | tree | snapshot
2019-06-14 Jim ProcterJAL-3111 report time when Jalview was built (consider... commit | commitdiff | tree | snapshot
2019-06-13 Jalview Development... Merge branch 'releases/Release_2_11_Branch' into develop commit | commitdiff | tree | snapshot
2019-06-13 Jim ProcterMerge branch 'bug/JAL-3295_CMD_select_not_working_in_se... commit | commitdiff | tree | snapshot
2019-06-13 gmungocJAL-3143 recognise lnc_RNA as transcript commit | commitdiff | tree | snapshot
2019-06-13 Ben SoaresJAL-3295 Can now compile/run/debug in Eclipse with... commit | commitdiff | tree | snapshot
2019-06-12 Ben SoaresJAL-3295 Fixed CMD-select of sequences in alignment... commit | commitdiff | tree | snapshot
2019-06-12 Ben SoaresJAL-3299 Fixed gitHash and gitBranch definitions in... commit | commitdiff | tree | snapshot
2019-06-11 gmungocJAL-3143 also parse "phase" from JSON response if present commit | commitdiff | tree | snapshot
2019-06-11 Ben SoaresMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2019-06-11 Ben SoaresJAL-3248 improved pandoc lookup. Now comma-separated... commit | commitdiff | tree | snapshot
2019-06-11 gmungocJAL-3111 update release date placeholder commit | commitdiff | tree | snapshot
2019-06-11 gmungocJAL-3288 fixes for gain/lose focus commit | commitdiff | tree | snapshot
2019-06-10 Ben SoaresJAL-3248 quick fix for build.gradle when pandoc not... commit | commitdiff | tree | snapshot
2019-06-10 Ben SoaresJAL-3248 building.html now generated by pandoc 'brew... commit | commitdiff | tree | snapshot
2019-06-10 Ben SoaresJAL-3248 added conversion of building.md to building... commit | commitdiff | tree | snapshot
2019-06-10 Ben SoaresMerge branch 'develop' into task/JAL-3248_rewritten_bui... commit | commitdiff | tree | snapshot
2019-06-10 Ben SoaresMerge branch 'task/JAL-3248_rewritten_building_md_instr... commit | commitdiff | tree | snapshot
2019-06-10 Ben SoaresJAL-3248 Building from source documentation in markdown... commit | commitdiff | tree | snapshot
2019-06-10 Ben SoaresJAL-3248 Building from source documentation in markdown... commit | commitdiff | tree | snapshot
2019-06-07 Ben SoaresJAL-3248 Almost completed building doc commit | commitdiff | tree | snapshot
2019-06-07 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into... commit | commitdiff | tree | snapshot
2019-06-07 Ben SoaresJAL-3248 a bit more commit | commitdiff | tree | snapshot
2019-06-07 gmungocJAL-3187 Viewport schema attributes for showComplementF... commit | commitdiff | tree | snapshot
2019-06-07 gmungocJAL-3251 added optional attributes Sequence.biotype... commit | commitdiff | tree | snapshot
2019-06-07 gmungocJAL-2738 use GeneLocus extends DBRefEntry to hold chrom... commit | commitdiff | tree | snapshot
2019-06-07 Ben SoaresMerge branch 'develop' into task/JAL-3248_rewritten_bui... commit | commitdiff | tree | snapshot
2019-06-07 Ben SoaresJAL-3225 removing slightly misleading rewrite of .class... commit | commitdiff | tree | snapshot
2019-06-06 Ben SoaresJAL-3225 Classpath now made in eclipse.classpath.file... commit | commitdiff | tree | snapshot
2019-06-05 gmungocJAL-3288 override JInternalFrame.setSelected() to avoid... bug/JAL-3288splitFrameMenusJava11 commit | commitdiff | tree | snapshot
2019-06-04 gmungocJAL-2386 avoid duplicate pdbids in free text query bug/JAL-3286duplicatePdbQuery commit | commitdiff | tree | snapshot
2019-06-04 Ben SoaresJAL-3287 correct local file URI for appbase and getdown... commit | commitdiff | tree | snapshot
2019-06-04 Ben SoaresJAL-3287 adjustment to HelpLinksChecker commit | commitdiff | tree | snapshot
2019-06-04 Ben SoaresJAL-3287 adjustment to HelpLinksChecker to run in Windo... commit | commitdiff | tree | snapshot
2019-06-04 Ben SoaresJAL-3248 small edits commit | commitdiff | tree | snapshot
2019-05-31 Ben SoaresJAL-3247 Adjusted Uninstall Old Jalview.app to just... commit | commitdiff | tree | snapshot
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