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jalview.git
2017-06-05 tcofoegbuMerge branch 'features/JAL-2136_phyre2_integration... spikes/phyre commit | commitdiff | tree | snapshot
2017-06-05 tcofoegbuJAL-2136 Introduced DynamicData model, modified Annotio... features/JAL-2136_phyre2_integration commit | commitdiff | tree | snapshot
2017-06-05 tcofoegbuMerge branch 'spikes/phyre' into features/JAL-2136_phyr... commit | commitdiff | tree | snapshot
2017-05-22 tcofoegbuMerge branch 'features/JAL-2136_phyre2_integration... commit | commitdiff | tree | snapshot
2017-05-22 tcofoegbuJAL-2136 broken build fix attempt commit | commitdiff | tree | snapshot
2017-05-01 tcofoegbuResolve properties file merge conflict with develop commit | commitdiff | tree | snapshot
2017-05-01 tcofoegbuMerge branch 'develop' into spikes/phyre commit | commitdiff | tree | snapshot
2017-05-01 tcofoegburesolved merge conflict commit | commitdiff | tree | snapshot
2017-05-01 tcofoegburesolve merge conflict in SiftsClientTest commit | commitdiff | tree | snapshot
2017-05-01 tcofoegbumerge develop commit | commitdiff | tree | snapshot
2017-05-01 gmungocMerge remote-tracking branch commit | commitdiff | tree | snapshot
2017-05-01 gmungocJAL-2434 omit unmapped positions from mapping commit | commitdiff | tree | snapshot
2017-04-28 gmungocJAL-2495 highlight all mapped sequences from structure... commit | commitdiff | tree | snapshot
2017-04-28 gmungocJAL-2434 check all sequences when determining superposa... commit | commitdiff | tree | snapshot
2017-04-28 gmungocJAL-2434 use a constant for StructureMapping.NO_CHAIN... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 patch jalview/io/testProps.jvprops to show... features/JAL-1933_occupancy commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 patch jalview/io/testProps.jvprops to show... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 don't show occupancy row when testing conserva... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 applet doc for showOccupancy parameter commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 desktop documentation for show occupancy prefe... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 use constant for preference token commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 consensus calculation doesn’t depend on occupa... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 desktop preferences for occupancy commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 action and label for occupancy commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 test for SHOW_OCCUPANCY .jalview_properties... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 showOccupancy applet parameter and SHOW_OCCUPA... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 only create and add occupancy row to alignment... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2494 fix: updated behaviour for SequenceGroup.findA... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2494 fixed behaviour for null parameters in line... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2494 javadoc for AnnotatedCollectionI.findAnnotations commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2494 test to cover AnnotatedCollectionI.findAnnotat... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2432 desktop: filter/select columns by threshold... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 JAL-2432 code tidy commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2432 left justify value shown after adjusting thres... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 JAL-2432 percentile filter for select/hide... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 shade occupancy from light grey to black for... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 don’t show symbol counts under histogram ... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 occupancy row has a space below it for counts commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'develop' into features/JAL-1933_occupancy commit | commitdiff | tree | snapshot
2017-04-25 tcofoegbuJAL-2489 edited unit test code comment commit | commitdiff | tree | snapshot
2017-04-25 tcofoegbuJAL-2489 Unit test for bug commit | commitdiff | tree | snapshot
2017-04-25 tcofoegbuMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2017-04-25 tcofoegbuJAL-2489 bug fix commit | commitdiff | tree | snapshot
2017-04-24 gmungocJAL-2487 remove redundant refreshGUI to minimise thread... commit | commitdiff | tree | snapshot
2017-04-24 kiramtJAL-2439 Fixed opposite out-by-one problem in wrapped... commit | commitdiff | tree | snapshot
2017-04-24 kiramtMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2017-04-24 kiramtJAL-2439 Fix to hidden column marker being one row... commit | commitdiff | tree | snapshot
2017-04-21 gmungocJAL-2295 Spanish translations for superposition / errors commit | commitdiff | tree | snapshot
2017-04-21 gmungocJAL-2295 Spanish translations added commit | commitdiff | tree | snapshot
2017-04-21 gmungocJAL-2361 Spanish text added commit | commitdiff | tree | snapshot
2017-04-21 tcofoegbuJAL-2485 Bug fix to filter out uniprot response header... commit | commitdiff | tree | snapshot
2017-04-19 tcofoegbuJAL-2482 added null check commit | commitdiff | tree | snapshot
2017-04-18 tcofoegbuJAL-2482 Bugfix commit | commitdiff | tree | snapshot
2017-04-18 tcofoegbuJAL-2136 merged develop into branch to fix build failure commit | commitdiff | tree | snapshot
2017-04-18 tcofoegbuJAL-2136 corrected error in annotation file commit | commitdiff | tree | snapshot
2017-04-12 gmungocJAL-2361 tweak layout of warning message commit | commitdiff | tree | snapshot
2017-04-11 kiramtJAL-2479 Moved some network-dependent unit tests into... bug/JAL-2479unitteststoNetworkGroup commit | commitdiff | tree | snapshot
2017-04-10 tcofoegbuMerge branch 'bug/JAL-2255_seq-fetcher-broken-on-linux... commit | commitdiff | tree | snapshot
2017-04-10 tcofoegbuJAL-2255 Bug fix bug/JAL-2255_seq-fetcher-broken-on-linux commit | commitdiff | tree | snapshot
2017-04-10 tcofoegbuMerge branch 'develop' into bug/JAL-2255_seq-fetcher... commit | commitdiff | tree | snapshot
2017-04-10 gmungocJAL-2361 option to save on OK of changed named colour... commit | commitdiff | tree | snapshot
2017-04-06 gmungocJAL-2361 make a modified saved scheme the backout check... commit | commitdiff | tree | snapshot
2017-04-05 gmungocJAL-2384 JAL-2371 update ResidueShader on change of... commit | commitdiff | tree | snapshot
2017-04-05 gmungocJAL-2361 simplify constructors, select unsaved but... commit | commitdiff | tree | snapshot
2017-04-05 gmungocJAL-2361 apply any saved changes to current colour... commit | commitdiff | tree | snapshot
2017-04-03 gmungocJAL-2314 made non-test method non-public bug/JAL-2314 commit | commitdiff | tree | snapshot
2017-04-03 gmungocMerge branch 'develop' into bug/JAL-2314 commit | commitdiff | tree | snapshot
2017-04-03 gmungocMerge branch 'develop' into bug/JAL-2461 bug/JAL-2461 commit | commitdiff | tree | snapshot
2017-03-31 gmungocJAL-2405 additional checks for circular reference in... commit | commitdiff | tree | snapshot
2017-03-31 gmungocJAL-2472 PrivilegedAccessor added commit | commitdiff | tree | snapshot
2017-03-31 gmungocMerge branch 'develop' into bug/JAL-2431splitFrameNewView bug/JAL-2431splitFrameNewView commit | commitdiff | tree | snapshot
2017-03-31 gmungocJAL-2430 code tidy, unit test for Jmol hidden column... commit | commitdiff | tree | snapshot
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-1608createGroups bug/JAL-1608createGroups commit | commitdiff | tree | snapshot
2017-03-30 gmungocJAL-1608 leave Create Group, Remove Group menu items... commit | commitdiff | tree | snapshot
2017-03-30 gmungocJAL-2401 code and help tidy for review comments commit | commitdiff | tree | snapshot
2017-03-30 gmungocJAL-2401 don't apply lower case colour to upper case commit | commitdiff | tree | snapshot
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2399textColour bug/JAL-2399textColour commit | commitdiff | tree | snapshot
2017-03-30 gmungocJAL-2346 JAL-1933 test updated to include Occupancy commit | commitdiff | tree | snapshot
2017-03-30 gmungocJAL-2346 always run setup! bug/JAL-2346annotationChoice commit | commitdiff | tree | snapshot
2017-03-30 gmungocJAL-2346 more test coverage for AnnotationColourGradient commit | commitdiff | tree | snapshot
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice commit | commitdiff | tree | snapshot
2017-03-29 gmungocMerge branch 'develop' into bug/JAL-1608createGroups commit | commitdiff | tree | snapshot
2017-03-28 tcofoegbuclean up mistake in the test file allhits.ann commit | commitdiff | tree | snapshot
2017-03-28 tcofoegbuJAL-2136 JAL-2137 Added improvement to enable explicit... commit | commitdiff | tree | snapshot
2017-03-28 tcofoegbuJAL-2136 fixed failing unit test for Phyre2Client commit | commitdiff | tree | snapshot
2017-03-28 tcofoegbuJAL-2465 missed commit for refactore renaming of getPdb... commit | commitdiff | tree | snapshot
2017-03-28 tcofoegbuJAL-2465 unit test for bugfix commit | commitdiff | tree | snapshot
2017-03-28 tcofoegbuJAL-2465 bugfix and rerefactor renamed getPdbFile(... commit | commitdiff | tree | snapshot
2017-03-24 Jim ProcterJAL-2360 fix applet build by separating castor XML... commit | commitdiff | tree | snapshot
2017-03-24 kiramtMerge remote-tracking branch 'origin/develop' into... commit | commitdiff | tree | snapshot
2017-03-24 kiramtJAL-2314 Tidy up commit | commitdiff | tree | snapshot
2017-03-24 kiramtJAL-2314 Fixes to DisorderAnnotExportImport test commit | commitdiff | tree | snapshot
2017-03-24 gmungocJAL-2464 fix cancel tree print behaviour commit | commitdiff | tree | snapshot
2017-03-23 kiramtMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2017-03-23 kiramtJAL-2388 unit test initialisation fix for running full... commit | commitdiff | tree | snapshot
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