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jalview.git
2019-01-29
Ben Soares
JAL-3141 Found a (not ideal) fix for updating the FileC...
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2019-01-28
Ben Soares
JAL-3141 improvement on BackupFilenameParts filename...
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2019-01-28
Ben Soares
JAL-3141 fixed test
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2019-01-25
Ben Soares
JAL-3141. This adds quite a lot of code to allow an...
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2019-01-24
Ben Soares
JAL-3141 Added a '.fa' to filename examples
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2019-01-24
Ben Soares
JAL-3141 Change of label (change of '_' character to...
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2019-01-24
Ben Soares
JAL-3141 Change of label
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2019-01-24
Ben Soares
JAL-3141 Removed border around example filenames in...
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2019-01-24
Ben Soares
JAL-3141 New layout and wording of Backups Preferences...
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2019-01-24
Ben Soares
JAL-3141 Eclipse re-formatting of file
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2019-01-24
Ben Soares
JAL-3141 Reformatted code in eclipse
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2019-01-23
Ben Soares
JAL-3141 Added Presets options in the Backups Preferenc...
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2019-01-22
Ben Soares
JAL-3141 Fixed what happens when suffix template has...
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2019-01-22
Ben Soares
JAL-3141 New message translations
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2019-01-21
Ben Soares
JAL-3141 Rejigged the Preferences tab and changed some...
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2019-01-21
Ben Soares
JAL-3141 Fixed tests for new placement of suffix after...
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2019-01-20
Ben Soares
JAL-3141 removing diagnostic output
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2019-01-20
Ben Soares
JAL-3141 Fixed example filenames in Preferences pane...
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2019-01-20
Ben Soares
JAL-3141 Changed suffix position to after the extension...
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2019-01-20
Ben Soares
JAL-3141 Re-added some changes in Jalview2XML missed...
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2019-01-18
Jim Procter
Merge branch 'feature/JAL-3063jaxbNoCastor' into featur...
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2019-01-18
Jim Procter
Merge branch 'develop' into feature/JAL-3063jaxbNoCastor
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2019-01-17
Jim Procter
JAL-3116 clear out whitespace when materialising Sequen...
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2019-01-16
Ben Soares
JAL-3141 Remove no longer used exampleLabel
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2019-01-16
Jim Procter
Merge branch 'feature/JAL-3063jaxbNoCastor' into develop
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2019-01-16
Jim Procter
Merge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA...
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2019-01-15
Jim Procter
JAL-1767 test that changing view association for PCA...
features/pca_jaxb_datasetrefs_JAL-3171_JAL-3063_JAL-1767
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2019-01-15
Jim Procter
JAL-1767 refactor associated view logic to public metho...
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2019-01-15
Jim Procter
JAL-1767 patch buggy PCA view association test
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2019-01-14
Ben Soares
JAL-3141 Forgot this file, sorry!
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2019-01-14
Ben Soares
JAL-3141 Added a 'Save Project as...' File menu item...
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2019-01-14
Ben Soares
JAL-3141 Made more constants
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2019-01-14
gmungoc
JAL-3186 remove Variable Colour from popup menu
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2019-01-14
gmungoc
JAL-3186 remove duplicate message keys
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2019-01-14
gmungoc
JAL-2069 wider dialog so all fields show!
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2019-01-14
gmungoc
JAL-2069 clear any error colour when setting threshold...
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2019-01-14
gmungoc
JAL-3125 tidy up
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2019-01-14
gmungoc
JAL-3125 avoid slider 'rounding' threshold field value
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2019-01-09
Ben Soares
JAL-3141 removed redundant method to tests
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2019-01-09
Jim Procter
JAL-1767 failing test to check if the PCA view associat...
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2019-01-09
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into features/pca_j...
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2019-01-09
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into feature/JAL...
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2019-01-09
Jim Procter
JAL-3063 remove stale JAXB binding POJO
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2019-01-09
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into features/pca_j...
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2019-01-09
Jim Procter
Merge branch 'feature/JAL-3063JAXB' into feature/JAL...
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2019-01-09
Jim Procter
JAL-3063 - ant task for regenerating JAXB schema -...
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2019-01-09
Ben Soares
JAL-3141 language word ending corrections
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2019-01-09
Ben Soares
JAL-3141 Added i18n for the example filenames in Prefer...
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2019-01-09
Ben Soares
JAL-3141 forgot to add this file after extracting the...
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2019-01-09
Ben Soares
JAL-3141 Made one more suggested change from code review
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2019-01-08
Ben Soares
JAL-3141 Made some more suggested changes from code...
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2019-01-08
Ben Soares
JAL-3141 Made some suggested changes from code review
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2019-01-03
gmungoc
JAL-1889 additional test for clover-added fields
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2019-01-03
gmungoc
JAL-1889 ignore 'synthetic' fields added for jacoco
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2018-12-21
gmungoc
JAL-1767 minimise local variable scope
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2018-12-20
Jim Procter
JAL-1767 port save/load PCA panel to JAXB - JAL-3063
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2018-12-20
Jim Procter
JAL-3171 JAL-3063 merge updates from JAL-1767
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2018-12-19
Jim Procter
Merge branch 'features/JAL-1767pcaInProject' into bug...
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2018-12-19
gmungoc
JAL-2791 JAL-2808 correct Javadoc for api method
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2018-12-19
gmungoc
JAL-3032 ignore /site also on non-JS branches
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2018-12-18
Jim Procter
JAL-2846 ahem - proper release note for this fix from...
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2018-12-18
Jim Procter
JAL-3178 known defect in release notes
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2018-12-17
Jim Procter
JAL-3111 JAL-2846 release notes
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2018-12-17
Jim Procter
Merge branch 'bug/JAL-2846' into develop
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2018-12-17
Jim Procter
JAL-3111 tweaked release notes and documented JAL-2864
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2018-12-17
Jim Procter
Merge branch 'bug/JAL-2864nullOverviewCanvas' into...
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2018-12-17
Jim Procter
JAL-2865 release notes
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2018-12-17
Jim Procter
Merge branch 'bug/JAL-2750' into develop
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2018-12-17
Jim Procter
Merge branch 'task/JAL-3174_fixed_filename_tests' into...
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2018-12-17
Jim Procter
JAL-3174 backout un-needed stacktrace for exception...
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2018-12-17
Ben Soares
JAL-3174 Merging in some test filename-case fixes
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2018-12-17
Jim Procter
Merge branch 'bug/JAL-2541cutRelocateFeatures' into...
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2018-12-17
Jim Procter
JAL-2541 JAL-2822 release notes
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2018-12-17
Jim Procter
JAL-3111 bump release 2.11 release to January 2019
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2018-12-17
Jim Procter
Merge branch 'develop' into bug/JAL-2541cutRelocateFeatures
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2018-12-14
Jim Procter
JAL-3171 dataset reference tests now in Functional...
bug/JAL-3171_maintain_datasets_across_views
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2018-12-14
Jim Procter
JAL-3171 record mapping between unmarshalled sequence...
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2018-12-14
Jim Procter
JAL-3171 raise warning when a dataset reference exists...
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2018-12-14
Jim Procter
JAL-3171 more complex project test - where sequences...
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2018-12-14
Jim Procter
JAL-3171 resolve dataset for imported projects via...
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2018-12-14
Jim Procter
JAL-3171 failing test for legacy projects and fixing...
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2018-12-14
Jim Procter
JAL-3171 register existing dataset for new view
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2018-12-14
Jim Procter
JAL-3171 failing test checking preservation of dataset
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2018-12-06
gmungoc
JAL-1854 fix Checkstyle import violations
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2018-12-06
gmungoc
JAL-1854 Checkstyle updated to 8.12
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2018-12-03
gmungoc
JAL-3063 Castor removed from codebase
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2018-12-03
gmungoc
Merge branch 'feature/JAL-3063JAXB' into feature/JAL...
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2018-11-20
Ben Soares
.gitignore changes
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2018-11-08
gmungoc
JAL-1889 ignore Clover instrumentation in test (second...
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2018-11-08
gmungoc
JAL-1889 unit test tweaks for running on server
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2018-11-05
Ben Soares
JAL-3141 Slightly improved message and more thorough...
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2018-11-05
Ben Soares
JAL-3141 couple of minor fixes for example files being...
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2018-11-02
Ben Soares
JAL-3141 Tests now available and working, bringing...
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2018-11-01
Ben Soares
JAL-3141 Preferences 'Backups' tab now fits. Moved...
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2018-10-31
Ben Soares
JAL-3141 Preferences 'Backups' tab now working. Doesn...
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2018-10-25
Ben Soares
JAL-3141 Ostensibly all backups working for alignment...
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2018-10-24
Ben Soares
JAL-3141 Code checkout. Not compiling.
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2018-10-24
Ben Soares
JAL-3141 Code checkout. Not compiling.
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2018-10-23
Ben Soares
BackupFilter and other unfinished business
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2018-10-22
Ben Soares
JAL-3141 Taken the backing up code out of FileChooser...
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