git://source.jalview.org
/
jalview.git
/ shortlog
commit
grep
author
committer
pickaxe
?
search:
re
summary
| shortlog |
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
jalview.git
2008-08-29
jprocter
OOM warning dialog
commit
|
commitdiff
|
tree
|
snapshot
2008-08-29
jprocter
pass OutOfMemory errors upstream from EBI fetch client
commit
|
commitdiff
|
tree
|
snapshot
2008-08-29
jprocter
sensibly sized example for PFAM source
commit
|
commitdiff
|
tree
|
snapshot
2008-08-28
jprocter
added d martin to authors and fixed faq/discuss message
commit
|
commitdiff
|
tree
|
snapshot
2008-08-28
jprocter
bugfix for Jmol and new classloader reading capability
commit
|
commitdiff
|
tree
|
snapshot
2008-08-28
jprocter
author list and jalview discuss mailing list update...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-28
jprocter
bugfix for applet examples with 1gaq where new classloa...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-28
jprocter
Throw exception for unknown protocols in case of carbon...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-27
jprocter
applied copyright 2008
commit
|
commitdiff
|
tree
|
snapshot
2008-08-27
jprocter
fix vamas homedir link
commit
|
commitdiff
|
tree
|
snapshot
2008-08-27
jprocter
added keystore config properties
commit
|
commitdiff
|
tree
|
snapshot
2008-08-27
jprocter
added Release_2_4_branch
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
update and test release build system
Release_2_4
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
2.4 release documentation update menus, service refs...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
update Jpred3 service referenec
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
allow '|' to be entered in URL text box and added regex...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
set title of viewer frame after file has been loaded...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
future bug fix todo
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
new thread for initting of DBRefFetcher with latest...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
uses shared singleton from jalview.gui.SequenceFetcher...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
added singleton access method to retrieve the latest...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
bugfix todo for the 'edit sequence' command
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
tooltip for fetch db refs and more generic regex for...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
pdb xrefs added as dbrefs and as PDB file links
commit
|
commitdiff
|
tree
|
snapshot
2008-08-26
jprocter
ensure successive matches to a regex have distinct...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-20
jprocter
Use 0f rather than NaN to specify non-valued annotation...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-20
jprocter
tooltip displays formatted annotation row description...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-19
jprocter
beginning of fix for embl/cds/highlighting IO in https...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-19
jprocter
fix for arrayoutofbounds bug when secondary structure...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-19
jprocter
better check for molecule type when identifying interna...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-19
jprocter
regex links for launching URL from single click on...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
update text and version checker
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
dialog size on macs
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
check for crossreferences every time the menus are...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
catch invalid URL link exception properly
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
increase height of dialog
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
allow '|' in regex for URL links to be recovered from...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
safer copy constructor
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
xrefs retrieved from Uniprot
commit
|
commitdiff
|
tree
|
snapshot
2008-08-15
jprocter
added castor back onto classpath
commit
|
commitdiff
|
tree
|
snapshot
2008-08-13
jprocter
check for null viewport on dataset recovery
commit
|
commitdiff
|
tree
|
snapshot
2008-08-13
jprocter
ensure input data can be recovered for tree and PCA...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-13
jprocter
do not try to cancel jobs that cannot be cancelled
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
ascii comment
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
mac logo resourcelocation hack
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
fix artefacts (again)
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
corrected target name in documentation
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
URL help update
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
added nojmol parameter to disable check for jmol
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
simpler regex-replace for path
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
fixing paths
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
regex blah
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
trailing slash regexed out
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
path fixing
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
resources are relative to root of jalview install path
commit
|
commitdiff
|
tree
|
snapshot
2008-08-12
jprocter
update to InstallAnywhere 2008 VP1
commit
|
commitdiff
|
tree
|
snapshot
2008-08-11
jprocter
regular expression based URL link generation
commit
|
commitdiff
|
tree
|
snapshot
2008-08-11
jprocter
Ensure 'None' translates into no colour scheme applied
commit
|
commitdiff
|
tree
|
snapshot
2008-08-11
jprocter
Upgraded to IA Standard 2008 VP1
commit
|
commitdiff
|
tree
|
snapshot
2008-08-11
jprocter
Upgraded to InstallAnywhere 2008 Standard ValuePack 1
commit
|
commitdiff
|
tree
|
snapshot
2008-08-10
jprocter
migration to automated build test
commit
|
commitdiff
|
tree
|
snapshot
2008-08-09
jprocter
fix default build path
commit
|
commitdiff
|
tree
|
snapshot
2008-08-09
jprocter
exclude any InstallAnywhere build artefacts
commit
|
commitdiff
|
tree
|
snapshot
2008-08-09
jprocter
installanywhere to a destination location
commit
|
commitdiff
|
tree
|
snapshot
2008-08-07
jprocter
updating installAnywhere autobuild
commit
|
commitdiff
|
tree
|
snapshot
2008-08-07
jprocter
headless build of InstallAnywhere installer
commit
|
commitdiff
|
tree
|
snapshot
2008-08-06
jprocter
generation of additional URLs for DBRefs on a sequence...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-06
jprocter
extra checks for datasetsequence for when getDbRefs...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-06
jprocter
getDBRefs now always returns DBRefArray if it exists...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-05
jprocter
vamsas documentation
commit
|
commitdiff
|
tree
|
snapshot
2008-08-05
jprocter
new vamsas session does not open a dialog box
commit
|
commitdiff
|
tree
|
snapshot
2008-08-05
jprocter
web services and sequence fetcher added to contents
commit
|
commitdiff
|
tree
|
snapshot
2008-08-05
jprocter
added sequence fetcher and sequence features retrieval...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-05
jprocter
updated statement of limitations for interactive annota...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-05
jprocter
new sequence fetcher documentation
commit
|
commitdiff
|
tree
|
snapshot
2008-08-05
jprocter
ensure das sequence sources are refreshed when das...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-05
jprocter
showbutton default is true
commit
|
commitdiff
|
tree
|
snapshot
2008-08-04
jprocter
stackoverflow fix
commit
|
commitdiff
|
tree
|
snapshot
2008-08-04
jprocter
PFAM retrieval and new applet parameter
commit
|
commitdiff
|
tree
|
snapshot
2008-08-04
jprocter
pfam seed and full alignment retrieval and nicer orderi...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-04
jprocter
added 'showbutton' applet parameter
commit
|
commitdiff
|
tree
|
snapshot
2008-08-01
jprocter
update to feature list (more to come here for 2.4 release)
commit
|
commitdiff
|
tree
|
snapshot
2008-08-01
jprocter
new SequenceFetcher gui and visual delay indication...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-01
jprocter
updated jalview version of dasobert 1.53e client and...
commit
|
commitdiff
|
tree
|
snapshot
2008-08-01
jprocter
todo
commit
|
commitdiff
|
tree
|
snapshot
2008-08-01
jprocter
interface for windows that display progress bars
commit
|
commitdiff
|
tree
|
snapshot
2008-07-31
jprocter
use canonical DbSource name in GUI box, and ensure...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-31
jprocter
refactored method for registering instance of a dbSourc...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-31
jprocter
quick fix for the new uniprot name schema - description...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-31
jprocter
added specific retrieval arguments to SequneceFetcher...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
resolve 1:many mappings for sequence associated annotat...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
resolve 1:many mappings from feature sequence ID to...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
allow findSeq to begin *after* a given sequence in...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
Sequence label colour stored for each sequence group
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
comment
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
annotation file format updated to take idColour and...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
Sequence label colour stored for each sequence group
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
User defined colourschemes are automatically generated...
commit
|
commitdiff
|
tree
|
snapshot
2008-07-18
jprocter
prevent exception when no default timeout is specified
commit
|
commitdiff
|
tree
|
snapshot
2008-07-11
jprocter
ensure annotationElements in non-graphical annotation...
commit
|
commitdiff
|
tree
|
snapshot
next