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jalview.git
2016-06-20
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-20
tcofoegbu
JAL-1823 Deleted two obsolete methods in PopupMenu...
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2016-06-20
Jim Procter
Merge branch 'r291_docs' into develop
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2016-06-20
Jim Procter
JAL-1812 groovy always present
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2016-06-20
Jim Procter
JAL-1812 release notes
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2016-06-20
Jim Procter
JAL-1812 documentation TBC for AlignFrame->Calculate...
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2016-06-20
Jim Procter
JAL-2089 typo
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2016-06-20
Jim Procter
JAL-1868 fix typo in test data.
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2016-06-20
Jim Procter
Merge branch 'features/JAL-1812_JAL-2083_groovyBinding...
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2016-06-20
Jim Procter
Merge branch 'develop' into features/JAL-1812_JAL-2083_...
features/JAL-1812_JAL-2083_groovyBinding
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2016-06-20
gmungoc
JAL-2130 call viewer.dispose() on closing Jmol
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2016-06-20
gmungoc
JAL-1667 updated PDB example query to a valid id (witho...
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2016-06-17
tcofoegbu
JAL-1823 Updated tooltip to reflect how a specific...
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2016-06-17
tcofoegbu
JAL-1976 clear message if export is cancelled at 'Rende...
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2016-06-17
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-17
tcofoegbu
JAL-1996 update applet deployment note pages
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2016-06-17
gmungoc
JAL-1557 selection from annotation (and group annotatio...
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2016-06-17
tcofoegbu
JAL-1976 improved exception handler.
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2016-06-17
tcofoegbu
JAL-1976 added an intermediate message between a user...
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2016-06-16
Jim Procter
tests for validating start-end number/sequence length...
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2016-06-16
gmungoc
JAL-1993 close sequence fetcher when opening database...
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2016-06-16
gmungoc
JAL-2124 JAL-1990 additional translations
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2016-06-16
gmungoc
JAL-2112 optimisation of EMBL CDS parsing
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2016-06-16
gmungoc
JAL-1993 hide sequence fetcher dialogue until database...
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2016-06-15
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-15
tcofoegbu
JAL-2002 disabled 'Best Uniport Coverage' filter. JAL...
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2016-06-15
gmungoc
JAL-2025 unit tests added
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2016-06-15
gmungoc
JAL-2101 unit test updated to match config file
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2016-06-14
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-14
tcofoegbu
JAL-2102 right justify 'Mass' in uniprot FTS, and ...
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2016-06-14
gmungoc
JAL-2114 more helpful reporting of parse failures
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2016-06-14
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2016-06-14
tcofoegbu
JAL-2047 trapped block that could likely cause ClassCas...
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2016-06-14
tcofoegbu
JAL-2047 resolved structure chooser's displayed column...
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2016-06-10
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-10
tcofoegbu
JAL-1479 updated SIFTS FTP download URL, added improvem...
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2016-06-10
Jim Procter
Merge branch 'r291_docs' into develop
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2016-06-10
Jim Procter
JAL-2089 docs for June 10th
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2016-06-10
Jim Procter
JAL-2089 signed off bug release notes
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2016-06-10
Jim Procter
JAL-1941 remove improper test tag from Annotate3D test...
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2016-06-10
Jim Procter
JAL-2089 documenting for 8th june RC1
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2016-06-10
Jim Procter
JAL-1941 added test URL and notes about PyRNA restclient
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2016-06-10
Jim Procter
JAL-1941 Annotate3d tests should be in network group
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2016-06-09
gmungoc
JAL-2114 corrected Javadoc
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2016-06-08
tcofoegbu
JAL-1479 JAL- Fix to eradicate duplicate mapping output...
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2016-06-06
tcofoegbu
JAL-1919, JAL-1960 fix to disable refetching dbrefs...
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2016-06-06
tcofoegbu
JAL-1944 bugfix for wrong alignment numbering when...
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2016-06-02
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-02
tcofoegbu
JAL-2020 fix for Jmol choking jalview while loading...
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2016-06-02
gmungoc
JAL-2124 additional Spanish text strings
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2016-06-02
gmungoc
JAL-1424 corrected typos in message text keys
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2016-06-02
gmungoc
JAL-1424 removed duplicate entry and unneeded full...
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2016-06-02
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-02
Jim Procter
JAL-2125 remove SHA256 digest manifest and signatures...
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2016-06-02
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-02
tcofoegbu
JAL-1944 java doc update and minor house keeping
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2016-06-02
Jim Procter
JAL-2125 remove SHA256 digest manifest and signatures...
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2016-06-01
Jim Procter
Merge branch 'testfix/JAL-2038' into develop
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2016-06-01
Jim Procter
JAL-2038 fix tests for case insensitive eSequenceIdMatcher
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2016-06-01
Jim Procter
JAL-2038 ensure bare Strings are lowercased before...
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2016-06-01
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2016-06-01
tcofoegbu
JAL-1944 updated bugfix implementation
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2016-06-01
gmungoc
JAL-1424 clearer messaging
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2016-06-01
gmungoc
JAL-1424 utility to check resource bundle labels used...
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2016-06-01
Jim Procter
Merge branch 'apifix/JAL-1926_JAL-2106' into develop
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2016-06-01
Jim Procter
fix build
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2016-05-31
Jim Procter
Merge branch 'apifix/JAL-1926_JAL-2106' into develop
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2016-05-31
Jim Procter
JAL-1551 JAL-2106 javadoc
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2016-05-31
Jim Procter
JAL-2110 abstract methods should never reference their...
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2016-05-31
tcofoegbu
merge
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2016-05-31
tcofoegbu
JAL-1563 minor user doc update
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2016-05-31
tcofoegbu
JAL-1944 fix for visible seqs sometimes been replaced...
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2016-05-31
gmungoc
JAL-2023 adjustments to mappings added for split frame...
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2016-05-31
gmungoc
JAL-2110 refactor + tests to allow a dbref version...
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2016-05-31
Jim Procter
Merge branch 'features/JAL-2113_emblXml1.2' into develop
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2016-05-31
Jim Procter
Merge branch 'develop' into features/JAL-2113_emblXml1.2
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2016-05-31
Jim Procter
Merge branch 'jims/291patches' into develop
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2016-05-31
gmungoc
JAL-1011 JAL-1989 don't mirror column-only selections...
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2016-05-31
gmungoc
JAL-2123 use "rlabel" command to highlight with label...
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2016-05-30
tcofoegbu
JAL-2038 fix to enable case-insensitive file name ...
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2016-05-30
Jim Procter
JAL-553 JAL-1557 always send selections after triggerin...
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2016-05-30
Jim Procter
JAL-1557 allow group associated rows to be used to...
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2016-05-30
Jim Procter
JAL-2077 release notes
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2016-05-30
Jim Procter
JAL-2077 fix: convenience method and checks for CMD...
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2016-05-30
Jim Procter
JAL-1551 formatting
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2016-05-30
Jim Procter
JAL-2089 update release date for 2.9.1
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2016-05-30
gmungoc
JAL-1670 JAL-2018 updated unit test for added example...
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2016-05-30
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2016-05-30
gmungoc
JAL-1989 equals method strengthened to fully match...
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2016-05-30
gmungoc
JAL-2119 help links checker added to /utils
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2016-05-30
Jim Procter
JAL-1552 fix JAL-2122 resolve File->string before addin...
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2016-05-30
gmungoc
JAL-2119 updated Valdar group link
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2016-05-29
gmungoc
JAL-2119 fixes for broken links in help files
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2016-05-27
gmungoc
JAL-1989 tightened up use of flag for 'column selection...
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2016-05-27
gmungoc
JAL-1989 added hashCode and equals, renamed field to...
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2016-05-27
gmungoc
JAL-1911 use existing object when setting 'Prompt each...
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2016-05-27
tcofoegbu
merge
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2016-05-27
tcofoegbu
JAL-1823 improvement to all chain code specification...
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2016-05-27
tcofoegbu
JAL-1911 further improvement to bugfix - do not save...
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2016-05-27
gmungoc
JAL-1942 small tidy (formatting, explict imports, typed...
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