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jalview.git
2017-09-04 Jim ProcterJAL-2588 update overview image - show the new gap shading commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch' commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterJAL-2675 what’s new for 2.10.2b1 commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterJAL-2675 source license commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'feature/JAL-2587' into documentation... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterJAL-2673 JAL-2675 release notes and release date for... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'bug/JAL-2673' into documentation/JAL... commit | commitdiff | tree | snapshot
2017-09-04 kiramtJAL-2673 turn off update to running flag from scrollUp... bug/JAL-2673 commit | commitdiff | tree | snapshot
2017-09-04 kiramtJAL-2673 Attempt to stop infinite scrolling etc commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'patch/JAL-2527_fixappletbuild' into relea... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterJAL-2527 move default colours for applet / application... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterJAL-2418 JAL-2116 use 1.7+ and 1.9+ for the version... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'features/JAL-2549_updateJABAWSto220'... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterJAL-2549 update release notes commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterJAL-2549 update JABAWS 2.2 library to client that repor... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterJAL-2704 release notes commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'bug/JAL-2704gapColourFading' into documen... commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'releases/Release_2_10_2b1_Branch' of... commit | commitdiff | tree | snapshot
2017-09-04 gmungocJAL-2617 unit tests for CDS + stop codon, CDS with... bug/JAL-2617mappedStopCodon commit | commitdiff | tree | snapshot
2017-09-04 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... commit | commitdiff | tree | snapshot
2017-09-04 kiramtJAL-2611 reinstated missed commit commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterJAL-2675 release notes commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterMerge branch 'feature/JAL-2587' into documentation... commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2691_nomultimermapping' into... commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterJAL-2672 JAL-2665 release notes. Also note this merge... commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2665-2.10.2b' into documentation... bug/JAL-2673_mergewithproblem commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterJAL-2664 JAL-2527 signs for release commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1... commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterJAL-2588 overview tab docs, whats new and release notes commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterJAL-2675 typo commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterMerge branch 'feature/JAL-2527' into documentation... commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterJAL-2681 release notes commit | commitdiff | tree | snapshot
2017-09-03 Jim ProcterMerge branch 'features/JAL-2681_duplicatecrossrefs... commit | commitdiff | tree | snapshot
2017-09-01 gmungocJAL-2617 omit stop codon from synthesized CDS sequence commit | commitdiff | tree | snapshot
2017-09-01 gmungocJAL-2216 remove alignment listener when Tree Panel... commit | commitdiff | tree | snapshot
2017-09-01 gmungocJAL-2488 remove finalize methods commit | commitdiff | tree | snapshot
2017-09-01 kiramtJAL-2527 Additional test feature/JAL-2527 commit | commitdiff | tree | snapshot
2017-09-01 kiramtJAL-2527 Unit test for group colouring commit | commitdiff | tree | snapshot
2017-08-31 kiramtJAL-2527 Unit test commit | commitdiff | tree | snapshot
2017-08-31 kiramtJAL-2527 Fix typo commit | commitdiff | tree | snapshot
2017-08-31 kiramtJAL-2527 Updated Spanish, adjusted UI so Spanish fits commit | commitdiff | tree | snapshot
2017-08-31 kiramtJAL-2527 Updates following code review commit | commitdiff | tree | snapshot
2017-08-31 gmungocJAL-2105 REST versions updated to 6.1 (Ensembl) 6.0... commit | commitdiff | tree | snapshot
2017-08-31 gmungocJAL-2253 safer simpler resolution of identifiers using... commit | commitdiff | tree | snapshot
2017-08-31 gmungocJAL-2704 unit test for Above PID gap colour, simplified... bug/JAL-2704gapColourFading commit | commitdiff | tree | snapshot
2017-08-30 gmungocJAL-2704 don't shade gap colour for PID/conservation commit | commitdiff | tree | snapshot
2017-08-30 gmungocJAL-2685 score matrix in sysout formatted with sequence... commit | commitdiff | tree | snapshot
2017-08-30 kiramtJAL-2527 Code comments, tidy commit | commitdiff | tree | snapshot
2017-08-30 kiramtJAL-2527 Added default setting/resetting and first... commit | commitdiff | tree | snapshot
2017-08-30 gmungocJAL-2685 tweaks to output spacing, updated TestAlignSeq... commit | commitdiff | tree | snapshot
2017-08-30 gmungocJAL-2685 use actual selection for report of pairwise... commit | commitdiff | tree | snapshot
2017-08-30 kiramtJAL-2527 Wired up cached values to overview commit | commitdiff | tree | snapshot
2017-08-30 kiramtMerge remote-tracking branch 'origin/feature/2588'... commit | commitdiff | tree | snapshot
2017-08-30 kiramtMerge branch 'feature/JAL-2664' into feature/JAL-2527 commit | commitdiff | tree | snapshot
2017-08-30 kiramtJAL-2587 Removed dissolve feature/JAL-2587 commit | commitdiff | tree | snapshot
2017-08-29 kiramtJAL-2664 Updates following review feature/JAL-2664 commit | commitdiff | tree | snapshot
2017-08-29 Jim ProcterMerge branch 'patch/JAL-2698_blockingAutoAssociateDiaog... commit | commitdiff | tree | snapshot
2017-08-29 kiramtJAL-2527 Added overview prefs - don't get picked up... commit | commitdiff | tree | snapshot
2017-08-29 Jim ProcterJAL-2698 spawn a thread to test for and raise auto... commit | commitdiff | tree | snapshot
2017-08-29 kiramtJAL-2665 OOM checks just in case bug/JAL-2665-2.10.2b commit | commitdiff | tree | snapshot
2017-08-29 kiramtJAL-2665 OOM checks just in case bug/JAL-2665-2.10.3 commit | commitdiff | tree | snapshot
2017-08-29 kiramtJAL-2665 OOM check commit | commitdiff | tree | snapshot
2017-08-29 kiramtJAL-2665 ported fix to 2.10.3. Doesn't work. commit | commitdiff | tree | snapshot
2017-08-29 kiramtJAL-2665 Corrected to draw selections for wrapped printing commit | commitdiff | tree | snapshot
2017-08-28 kiramtJAL-2527 Started adding overview preferences commit | commitdiff | tree | snapshot
2017-08-28 gmungocMerge branch 'bug/JAL-2687concurrentModification' into... commit | commitdiff | tree | snapshot
2017-08-28 gmungocJAL-2608 close any Overview when alignment view is... commit | commitdiff | tree | snapshot
2017-08-28 kiramtMerge remote-tracking branch 'origin/develop' into... commit | commitdiff | tree | snapshot
2017-08-28 kiramtMerge remote-tracking branch 'origin/releases/Release_2... commit | commitdiff | tree | snapshot
2017-08-28 kiramtJAL-2665 Changes for review comments; printing with... bug/JAL-2665 commit | commitdiff | tree | snapshot
2017-08-27 Jim ProcterJAL-2691 assert chains are recovered by AAStructureBind... bug/JAL-2691_nomultimermapping commit | commitdiff | tree | snapshot
2017-08-27 Jim ProcterJAL-2691 catchall if passed dataset sequences (tests... commit | commitdiff | tree | snapshot
2017-08-27 Jim ProcterJAL-2693 TODO comments commit | commitdiff | tree | snapshot
2017-08-27 Jim ProcterJAL-2691 discover any existing chain mappings for a... commit | commitdiff | tree | snapshot
2017-08-27 Jim ProcterJAL-2691 cached view combo box value javadoc commit | commitdiff | tree | snapshot
2017-08-25 kiramtJAL-2587 Removed duplicate events fired to progress bar commit | commitdiff | tree | snapshot
2017-08-25 kiramtJAL-2587 Removed annoying double repaint on hide insertions commit | commitdiff | tree | snapshot
2017-08-25 kiramtJAL-2587 Update overview progress bar while drawing... commit | commitdiff | tree | snapshot
2017-08-25 gmungocJAL-2687 use Iterator.remove() for safe deletion while... commit | commitdiff | tree | snapshot
2017-08-25 kiramtJAL-2587 Progress bar sizing tweaks commit | commitdiff | tree | snapshot
2017-08-25 gmungocJAL-2480 suppress debug timing output that got left in commit | commitdiff | tree | snapshot
2017-08-25 kiramtJAL-2587 Made progress bar display before overview... commit | commitdiff | tree | snapshot
2017-08-23 gmungocJAL-2435 last lost commit e926a5d redone commit | commitdiff | tree | snapshot
2017-08-23 gmungocJAL-2435 last lost commit e926a5d redone commit | commitdiff | tree | snapshot
2017-08-23 gmungocJAL-2481 a smidgin more test coverage of findFeatures commit | commitdiff | tree | snapshot
2017-08-23 gmungocJAL-2682 non-regex sequence id parsing, and tests added commit | commitdiff | tree | snapshot
2017-08-23 gmungocJAL-2667 tests added, update status bar and tooltip commit | commitdiff | tree | snapshot
2017-08-22 Jim ProcterJAL-1551 formatting commit | commitdiff | tree | snapshot
2017-08-22 Jim ProcterJAL-2681 cross-ref selection for targeted debugging commit | commitdiff | tree | snapshot
2017-08-22 Jim ProcterJAL-2681 source formatting commit | commitdiff | tree | snapshot
2017-08-22 Jim ProcterJAL-2681 canonicalise DB source before fetching to... commit | commitdiff | tree | snapshot
2017-08-22 Jim ProcterJAL-2681 formatting commit | commitdiff | tree | snapshot
2017-08-22 gmungocJAL-2680 remove all mappings in test teardown commit | commitdiff | tree | snapshot
2017-08-22 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2017-08-22 gmungocJAL-2609 tiny tidy features/JAL-2609fastPaintWrapped commit | commitdiff | tree | snapshot
2017-08-22 gmungocJAL-2609 corrections for print wrapped view commit | commitdiff | tree | snapshot
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