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jalview.git
2017-12-08
gmungoc
JAL-2843 read/write feature filters from/to Jalview...
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2017-12-08
gmungoc
JAL-2843 refactor / tidy for feature filter input/output
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2017-12-08
gmungoc
JAL-2843 methods relocated
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2017-12-08
gmungoc
JAL-2843 toStableString, fromString for Jalview feature...
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2017-12-08
gmungoc
JAL-2843 FeatureRenderer.getFeatureFilters returns...
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2017-12-05
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
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2017-12-04
gmungoc
JAL-2808 JAL-2850 update spike build to latest
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2017-12-04
gmungoc
Merge branch 'spikes/mungo' into features/JAL-1793VCF
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2017-12-04
gmungoc
JAL-2850 JAL-1766 option to load contig sequence refere...
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2017-12-04
gmungoc
JAL-2845 locate reverse strand insertion as complement...
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2017-12-04
gmungoc
JAL-2835 small refactor to only extract transcript...
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2017-12-01
gmungoc
JAL-2835 spike updated to latest (use specific SO term...
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2017-12-01
gmungoc
JAL-2835 refactored to extract specific consequence...
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2017-12-01
Jim Procter
Merge branch 'develop' into bugs/JAL-2780_JAL-2781_pdbn...
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2017-12-01
gmungoc
JAL-2792 sort feature attributes for output, not for...
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2017-12-01
gmungoc
JAL-2835 additional sub-terms of sequence_variant added
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2017-11-30
Jim Procter
JAL-2858 tweak OSX specific jar resources in JNLP
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2017-11-30
gmungoc
JAL-2850 improved use of htsjdk api to read contig...
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2017-11-30
gmungoc
JAL-1766 additional tests for stub htsjdk wrapper
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2017-11-30
Jim Procter
Merge branch 'develop' into releases/Release_2_10_3_Branch
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2017-11-30
Jim Procter
JAL-2849 release notes
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2017-11-30
Jim Procter
Merge branch 'bug/JAL-2849' into develop
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2017-11-30
Jim Procter
JAL-2849 JAL-2863 file format preferences TODO
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2017-11-30
Jim Procter
JAL-2849 fix
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2017-11-28
Jim Procter
Merge branch 'bug/JAL-2859_uniprottowrongpdbid' into...
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2017-11-28
Jim Procter
JAL-2740 release notes
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2017-11-28
Jim Procter
Merge branch 'bug/JAL-2740' into develop
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2017-11-28
Jim Procter
JAL-2827 release notes
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2017-11-28
Jim Procter
Merge branch 'bug/JAL-2827' into develop
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2017-11-28
Jim Procter
JAL-2842 release notes
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2017-11-28
Jim Procter
Merge branch 'bug/JAL-2842' into develop
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2017-11-28
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
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2017-11-28
gmungoc
JAL-2850 MapList.isToForwardStrand added
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2017-11-27
Jim Procter
JAL-2859 disambiguate with PDB ID if no file path
bug/JAL-2859_uniprottowrongpdbid
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2017-11-27
Jim Procter
JAL-2859 failing test demonstrating sequences with...
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2017-11-27
Jim Procter
Merge branch 'develop' into releases/Release_2_10_3_Branch
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2017-11-27
Jim Procter
JAL-2851 JAL-2858 release notes for 2.10.3b1
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2017-11-27
Jim Procter
Merge branch 'develop' into releases/Release_2_10_3_Branch
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2017-11-27
Jim Procter
Merge branch 'bug/JAL-2851' into develop
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2017-11-27
gmungoc
JAL-2850 VCFLoader refactored to load VCF to contig...
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2017-11-24
kiramt
JAL-2759 update benchmark code
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2017-11-24
gmungoc
JAL-2808 update spike to latest
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2017-11-24
gmungoc
JAL-2808 refactoring to better handler filter by Score...
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2017-11-24
gmungoc
JAL-2808 relocate constants for compiler, add COLUMN_CO...
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2017-11-24
gmungoc
JAL-2808 refine FeatureMatcher interface and matcher...
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2017-11-24
gmungoc
JAL-2808 don't cache i18n - MessageManager already...
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2017-11-23
gmungoc
JAL-2808 update spike to latest (filter range tooltip...
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2017-11-23
gmungoc
JAL-2808 refactor KeyedMatcher as FeatureMatcher with...
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2017-11-23
gmungoc
JAL-2808 update spike to latest (filter range, Present...
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2017-11-23
gmungoc
JAL-2808 removed field filters; sort CSQ data by key
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2017-11-23
gmungoc
JAL-2808 added conditions Present, NotPresent as options
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2017-11-23
kiramt
Merge branch 'develop' into bug/JAL-2851
bug/JAL-2851
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2017-11-23
kiramt
JAL-2851 Fix merge error breaking vertical scrolling
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2017-11-23
gmungoc
JAL-2808 refactor conversion of table data to beans...
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2017-11-23
gmungoc
JAL-2808 pass FeatureSettings to controller as array...
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2017-11-22
gmungoc
JAL-2808 update conditions list on change of attribute...
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2017-11-22
kiramt
JAL-2842 JAL-2759 change to SeqPanel moveCursor
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2017-11-22
gmungoc
JAL-2069 spike updated with latest (FeatureTypeSettings)
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2017-11-22
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
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2017-11-22
gmungoc
JAL-2808 JAL-2069 FeatureTypeSettings (with new Filters...
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2017-11-22
kiramt
JAL-2759 code tidy
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2017-11-22
kiramt
JAL-2759 performance improvements to hideColumns
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2017-11-22
gmungoc
JAL-2069 renamed helper method better
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2017-11-22
gmungoc
JAL-2808 defer dispose to allow screen location to...
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2017-11-22
gmungoc
JAL-2069 Javadoc added only
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2017-11-22
gmungoc
JAL-1424 enhanced to report dynamic keys separately
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2017-11-22
kiramt
JAL-2759 performance tweaks
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2017-11-22
gmungoc
JAL-2808 capture feature attributes datatype (Character...
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2017-11-22
kiramt
JAL-2759 HiddenColumns test polishing
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2017-11-21
kiramt
JAL-2759 corrected old getVisibleBlocksIterator calls...
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2017-11-21
kiramt
JAL-2759 Remove getVisibleBlocksIterator call
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2017-11-21
kiramt
Merge branch 'develop' into feature/JAL-2759
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2017-11-21
kiramt
JAL-2759 BoundedStartRegionIterator test
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2017-11-21
kiramt
JAL-2759 unit tests for VisibleContigsIterator
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2017-11-20
Jim Procter
JAL-2698 only allow InstallAnywhere launches with versi...
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2017-11-20
Jim Procter
JAL-2698 patch path for InstallAnywhere build. Webstart...
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2017-11-20
kiramt
JAL-2759 cursor option for BoundedStartRegionIterator
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2017-11-20
kiramt
JAL-2759 reinstate change from develop (JAL-2636) someh...
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2017-11-20
kiramt
JAL-2759 rationalise visible contigs iteration
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2017-11-20
kiramt
JAL-2759 improvements to speed up synchronisation;...
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2017-11-17
Jim Procter
JAL-2698 tidy release notes and whats new
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2017-11-17
Jim Procter
JAL-2698 source code licencing
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2017-11-17
Jim Procter
JAL-2698 tidy up release notes
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2017-11-17
Jim Procter
JAL-2698 Cached PDB Entries -> Cached Structures in...
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2017-11-17
Jim Procter
JAL-2466 revised help text for sort by PID
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2017-11-17
Jim Procter
JAL-2698 what’s new and release notes
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2017-11-17
Jim Procter
JAL-2822 known defect for 2.10.3
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2017-11-17
Jim Procter
Merge branch 'bug/JAL-2784' into develop
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2017-11-17
Jim Procter
JAL-2841 JAL-2791 new known defect
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2017-11-17
Jim Procter
JAL-2541 known defect
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2017-11-17
Jim Procter
JAL-2684 clarify release notes
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2017-11-17
Jim Procter
Merge branch 'bug/JAL-2821' into develop
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2017-11-17
Jim Procter
JAL-2840 release notes
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2017-11-17
Jim Procter
Merge branch 'bug/JAL-2837' into develop
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2017-11-17
kiramt
Merge branch 'develop' into bug/JAL-2837
bug/JAL-2837
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2017-11-17
Jim Procter
Merge branch 'doc/JAL-2494_JAL-2828_mergefindAnnotation...
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2017-11-17
kiramt
Merge branch 'develop' into bug/JAL-2837
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2017-11-17
Jim Procter
JAL-2811 release note
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2017-11-17
Jim Procter
JAL-2541 not in 2.10.3, JAL-2831 signed off.
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2017-11-17
Jim Procter
JAL-2698 11th hour release today
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